Gene CNM00700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00700 
Symbol 
ID3255149 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp214306 
End bp215974 
Gene Length1669 bp 
Protein Length463 aa 
Translation table 
GC content51% 
IMG OID638254222 
ProductEukaryotic translation initiation factor 3 subunit 6, putative 
Protein accessionXP_568335 
Protein GI58261850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0896667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGAACACCT ATACTCCTCT AAAAAACCAA AACAAGATCC AAAATGGCCG ATTACGACCT 
TACACAGGTG AGCATACACC CTTCCTGACA TAGCTGACAT ACAGAAACTC ATCCCCCACC
TCGACCGACA CCTTGCTATC CCTCTCCTCA ACCACCTCTC AGATATTGCA ATCTACCCTG
CCGAACAACT CGCCAGAGCT CAGTGAGTCA TGTTAGCTTG AGAGCCTCGC TAATAACCCA
GATATGATCT CGCTAAAGGC ACCAACATGG TCAACTACGT TGAACAATTC CACGCCCAGA
TTGAAAATGC CGAACCTACC GACTTTGCTA GACTGAGAGA TGAGGCTACT GCCAAGTATC
AGGAGTTGCA GGAGAAGGCT CAGCCCGTGA CAAAGGTGAT CGAGGACCCA GATGCGGTGG
CTAAATTGAG GAGCGGTGGT GACAAGGACA GAAATCTGGA TTTGCTGAGA TCAGAGTACC
AGGTGAGTTG CTCACAACGC GGAATTCATT CAAAACGGGC GAAACTTACG TCTTGCAGAT
TGACATTGAC CAAATCAATG CCCTTTACCA CTTTGGTCAA TACCAATACT CTCTTGGTGA
CTACGGTTCT GCCGGAAACC TTCTCTACCA CTTCCTCATT CTTTCTCCTT CTTACGAGCT
TAACATCTCT GCTCAATGGG GTAAACTCGC CTCCAACATC CTCAATGGTG AATGGGACGC
TGCTTTGATG CAAGTCCGAG ACCTCCGCGA GACCATCGAT AACCCCCATG GTACCTCTCT
TGCCAAGCCT CTCGCTCAGC TCCAGGCCCG AACATGGTTG CTTCACTGGT CTCTCTTTGT
GTTTTTCAAC CTCGGAGAGA ACCAAGGCTG CCAAGGCTTG CTTGACATGT TCCTTTCCCC
CGCCTACCTC AACACCATCC AAACTTCTTG CCCTCACCTC CTGCGATACC TCGTTGCTGC
CGCCATCATC TCACGCCGAG CTCCCAAACC CGCCAATGTC CGCTCTCGAG ACCACGTCAA
GGAGCTCACC CGTATCGTTG AGACTGAAGA GTACCAATAC ACCGATCCCA TCACCAGCTT
CCTCAAGGAT GTGTTTGCCG ACTTTGATCT CACCCAGGCT CAACAACGAT TGTCAGTCGC
CGAGTCTGTC GTCCGTTCAG ACTTTTTCTT GTCAGGCTTT GCGGATGAGT TTGTGGAGAA
CGCGAGGTGG TTGATTTCCG AGGTTATCTG CCGTTTACAT CGAAGGATTG ATATTGGACA
ATTGTCCAAG ACCCTCAACT TGTCCAATGA GGAAGGAGAG AAGTGGATTG TTAACCTTAT
CAGGGACTCG AGGATGGGTG TTGAGGCCAA GATCGACCTG AAGGAGGTGA GAATATTGAG
ATCCATAGCG TATCATAATG TTTTACTGAT ATCAATTTTA GAACATGCTT CACATCACAC
GGCCTCACGC CACCCCGACC GCCACCCTTA TCGAAACCAC CCGTGGTCTT GCGTTCCGAT
CCCAAGCAAT CCAGTTTGCC ATGCAGAGCA GCGTCGGGGA ACCTCGAGAG CGAGGGGAGC
GAGGGGAGCG AGGAAACAAG GGAGGACGAG GAAGGCCAAG GACTCAGGAA GTTGCGGCTT
AGATTTAGAC GAGAGCTTGG TTTGGGTACA AGAGGCATGT ATAGGTATA
 
Protein sequence
MADYDLTQKL IPHLDRHLAI PLLNHLSDIA IYPAEQLARA QYDLAKGTNM VNYVEQFHAQ 
IENAEPTDFA RLRDEATAKY QELQEKAQPV TKVIEDPDAV AKLRSGGDKD RNLDLLRSEY
QIDIDQINAL YHFGQYQYSL GDYGSAGNLL YHFLILSPSY ELNISAQWGK LASNILNGEW
DAALMQVRDL RETIDNPHGT SLAKPLAQLQ ARTWLLHWSL FVFFNLGENQ GCQGLLDMFL
SPAYLNTIQT SCPHLLRYLV AAAIISRRAP KPANVRSRDH VKELTRIVET EEYQYTDPIT
SFLKDVFADF DLTQAQQRLS VAESVVRSDF FLSGFADEFV ENARWLISEV ICRLHRRIDI
GQLSKTLNLS NEEGEKWIVN LIRDSRMGVE AKIDLKENML HITRPHATPT ATLIETTRGL
AFRSQAIQFA MQSSVGEPRE RGERGERGNK GGRGRPRTQE VAA