Gene CNM00630 details

Gene Information

• Locus tag: CNM00630
• ID: 3255127
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: -
• Start bp: 194567
• End bp: 196533
• Gene Length: 1967 bp
• Protein Length: 546 aa
• GC content: 49%
• IMG OID: 638254215
• Product: trehalose transport-related protein, putative
• Protein accession: XP_568347
• Protein GI: 58261874
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00879] MFS transporter, sugar porter (SP) family

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTCAC ACAGCGACAA GACAACCCGT ATTGCCGGCA AACATGCCGA GCAGCTTTTC 
TATGCTGATC CAACGCTCGT GCAGAGTGCA CTCTCGGCGG CAGCTGCAGA GAAAGAACTG 
GGCTTCAAAA AGACCTTCCG ACTTTACTAC AAAGCTGCTT TGTGGTCCAT GGCTCTTTCC 
CTTGCTCTTG TAATGGAGGG CTATGATGTC GGCATCGTGA GTTATGATCG CTTGACCATT 
GTATACTGTA CTGACAGCCT CACTCAGATC AACTCGTTCT GGGGTCAGGC TTCCTTCTTG 
AACAAGTTCG GCAGTACCGC TGCGGATGGA ACGAAGTATA TCCCTGCCAA TTGGCAAGCT 
GCGTTGAACA ACGCGACCTC GATCGGACAA ATGATCGGTC TAGCTATCAA CGGATGGGCA 
CAACCCAAGT TTGGTTCCAA AAAAGTTTAC TTGACTGCCA TGGCCGTGAT GGTAGGGACT 
ATCTTCCTTC CAGTGTTTTC GACTTCGTTG CCCATGCTTT TTGGAGGTGA AATCCTGTGT 
GGTATCCCAT GGGGTATCTT CCGTAAGTAT ATACACTGAC ATGGGGTATT ATGTGCTCAT 
CTAACCATCC ATAGAAACCC TCTCCACCGC TTACGCTGCC GAAATCTGTC CTCTTGCCAT 
GCGAGGTTAC CTCACCGCAT TTGTCAACAT GTGCTGGGGC TTTGGACTCT TGCTCTCTGC 
TGGGGTGGTT CGGGCCTCTC TCGAGCTAGA CAGTCAATGG GGCTGGAGAA TCCCTTTCAT 
GATTCAATGG GTGTGGCCAG TACCATTGTT CGTCATTGCG TGTTTCGCTC CTGAAAGTGA 
GTGCATTGCC ACCCCTGGAT CCATACGATC GCTCACAGGT TTCATGGAAC TGCAGGTCCT 
TGGTACCTTG TCAAAGTCGG CCGCGAAGAC GACGCCCGAG CGACTACTAA GCGACTTGCA 
CCATCTGAAT ACCTCACCGA TCAGCTCGTT GATCAACAAA TCGCCCTCAT GAAACATACC 
ATCGAAATGG AGAAAGCAGA AACTCAAGGC GCTTCTTTCT TAGACTGTTT CAAAGGTTCC 
AATCTGCGTC GAACTGAAAT TGTAAGTGTC CCATTACATC ACATTAAAGG AGCGTATCAA 
CCCTTACACA AATCTAGGTC ATGCTGGTAT GGATTATCCA GTACTGGTCC GGCCAAAACA 
TCATCAACTA CGCCACCCAG TAGTAAGTGT GATTCATACT GCGCATTTTG CAAACCCTGC 
TGATCAATGA CACAGCCTGC AGACCGGCGG AATGACTGAA GATGGCGCTT TCAACATGTT 
CCTCGGCATC ACATGCTGCT ACATCGTGGG CACTGCTGCG TGCTGGTACA CTATGCATCA 
CTTCGGTCGA AGATCCATTT ACATCGCAGG AGTCGCCCTG ATGGTAGTCT GGCACGTCAT 
CATTGGAAGT CTTGGAACTG TCAACTCGAC CAAAGCCACC CTTGCAATTG GCATTGTAAT 
GGTCATCATC AACTTTTCCA CCAATGCAAC TTTCTTCCCC GTGACCTACA CGATTGCGGC 
AGAGGTTCCC GCTACTCGTG TCAGAGCAAA GACCATGGTC CTCGGCAGAG GAGTCTACCT 
CATCTCATCA ATCATTTGTA ATCAGATCAC CCCTCGAATG TTCTCCGTCT CAGAGTGGAA 
CTGGGGTGCC AAGTCCAGCT TCTTCTGGAT GGGGTGTTGT CTCATATCCT TGGTGTACCT 
ATGGTTCCGA CTTCCCGAGA CCAAAGGTAG AATGTTCAGC GAGTTGGATG TGCTGTTTGG 
TGAGTGAGGC CTTTTCAAAA TATTGGGATA TGGCTGATCA CGTCACCGTT ACAGCAAATG 
AAGTACCGGC TCGGCAATTC AAGCACACTA TCGTTGATGA GCTTTCCGCA GTGACTGAAG 
AGAAATACAC TGAGAAGGGA GAGATAGAAT ATCAGGAGAA TGCGTAG 

 

Protein sequence

MLSHSDKTTR IAGKHAEQLF YADPTLVQSA LSAAAAEKEL GFKKTFRLYY KAALWSMALS 
LALVMEGYDV GIINSFWGQA SFLNKFGSTA ADGTKYIPAN WQAALNNATS IGQMIGLAIN 
GWAQPKFGSK KVYLTAMAVM VGTIFLPVFS TSLPMLFGGE ILCGIPWGIF QTLSTAYAAE 
ICPLAMRGYL TAFVNMCWGF GLLLSAGVVR ASLELDSQWG WRIPFMIQWV WPVPLFVIAC 
FAPESPWYLV KVGREDDARA TTKRLAPSEY LTDQLVDQQI ALMKHTIEME KAETQGASFL 
DCFKGSNLRR TEIVMLVWII QYWSGQNIIN YATQYLQTGG MTEDGAFNMF LGITCCYIVG 
TAACWYTMHH FGRRSIYIAG VALMVVWHVI IGSLGTVNST KATLAIGIVM VIINFSTNAT 
FFPVTYTIAA EVPATRVRAK TMVLGRGVYL ISSIICNQIT PRMFSVSEWN WGAKSSFFWM 
GCCLISLVYL WFRLPETKGR MFSELDVLFA NEVPARQFKH TIVDELSAVT EEKYTEKGEI 
EYQENA