Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM00540 |
Symbol | |
ID | 3255135 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | - |
Start bp | 147714 |
End bp | 158351 |
Gene Length | 10638 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.271423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAACT ACGCAACCCC TGTACACGAT ACCACGGGTG CAATCTACCG AAAGACCCCG GGCCTCACCA CTGCCTTTTC CGGCCCGGCC GTTCCTGAGA TCGACGAGCT TAAATCTATT GTTGCCGGAC TCCTTCGTTC CACCCAAGCG CTAGCCGATC AAGCCACCAC AGGCCACGAT CGTCACGTCC CCCCCTCCAC ACGCGGGTCC CGCCCGGACA AGATCTCCCC GCCGCGACTT GGGACTCACT CCTCCGCCGA CCCGTTCGCG CTCCAGCGAC ATCTCCTCGC CTTGGAGACC TATTTCCGTG ACGCCCTCCT ACACTGGAGC CCCGGCCCGG CTGAGCACGC GTGGAAGATT TCGGTGGCAA ATACCTCGAT CTCCCAATCG GGCGGCCGGT TCACCACGTG GCTCGAGCTC CATGGCAAAC ACGCCGAAAC TTGGGATGCA TGGCAAGTCT CCCTTAAGTC TCACATTCTC GCCCGCGGCT GGGAGTCCAA ACTCCGCCAC CGATTCATGC AGCTCCGCTG CTTGGACACC ACACCCGCCG CGTTCGATGC ATTCTTTCAC CTTGTTATCA GTTACCAAGG CATTCTTCAT GACTTCGAGG ACCCCCTCAG CGACGTGGAC GTCAACCGCC GACTATTGGA CGGTGTCGAT GCCTTGGTTA CTCACCGCAC CAAAGCTGCT CTCCGCGCAC GTGGCAAAAC GGTGCTCTCC GCAACGTCGG CCGACCTATA CGAGATCATG ATGGACGTCA TCGATGACGC CATGCTTGAG GCGCGTTTCC TTCAGGTGCC GACACGCCCC CGCCACCCAC CAACCGTCGC CAACGTCATC GCTCCCGCCC TCGCACCTCC ACTCATTGCC AAACTCGCCC CCGCCCCCTC CACCACCACG AAGGGCTACA CCGCACAACA GCTCGACTGG CTCGACCCCG CCAAACGGCT CCCCCTCGGT GACGCCGGCC GATCTGCCCG CGCCTATCTT CAAAGCATCA ACGCGTGTTT CTCATGCCGC GTTGTCGGCC ATCACCGCCT TATCTGCCCA ACCCGCCCCC CCTCCACCCC GCCCAACGCC TCCGCGTCCG TGCCGGTCGC TAACCTCGTC TCCCTTGCCG ACGACGACGA GTCCGACCAC CACGGCGTTT TCGCTGTCGA CCCTGTCACA GACACTCTAG TACAGGATGC CTCGTCTGCG CTCGCTGGGT CAGTACCTCT CATCATGGTC AATTGCCGTT TCAAGGCTGA CGGAGACACT GTCCCAGCAC TCGTTGATTG CGGCGCTGGC ATCAACGTCG TTGACCGGGC GTACGCAGAG CAACAGGGAT GGCAAGGACG GCCGATTATA CCGGTGGGGA CCAAAATGGC AGACAATCGG GCGGGTCCAG TCGTAGACCA GGAGTATGTA GTGGATGTAA TCATTGGTGA CACTACCTAC AACGCTACCC CATTCTACGC CATGGCCCTT GGTCCACGAT ACCGCCTTAT CCTCGGATTA CAGTTCTGTC GTCAACACCG CCTATTTGAT GGGGCGGAGC GTTTAAATCA CCTCCTCAAT GCAGGGGGGT CATCCTATAC ATCGCTTGTG CAACTACAAC TCAACTCCAT CACACCAGTC GAATCCCCGA CTGTCAGCAC TGAACACCAC TCCCACTCCG ACGCCATCCT CCGTGAATTT GCCGACATCC TTCCAGCCAA TATCTCTGAC GTCTCCCACT ACCCGCCCAT TTGTTCGTCC ACCTCCCAAG TCCGCCACCG AATAAACATT CTTCCTGATG CGATGCCTGT CGCTCGAGCT GGATTTCGAG TACCGTTAGC GTGGCGCGAC ACCCTTCGAC AAGAAATCGA GAAACACCGT ACCGCAGGCC GCCTCCGTCC ATCCAGTTCC CCTTGGGCCG CCCCTGCTTT CCTCATTAAG AAAGAAAATG GCAAATTCCG TTTCCTCTGC GATTTTCGCG GCCTCAATAG TGTTACGGTT AAAGATCGAA CCCCGGTTCC CAACATTGAC GACATTCTTC AACGCGCCGC TCGTGGCAAG GTTTTCGCCA AACTCGACCT TACCGATGCA TTTTTTCAGA CGCTCATGCA TGAGCCTGAT ATCGAGAAAA CGGCAATCAG CACTCCCTGG GGTTTATACG AATGGGTTGT GATGCCGCAA GGTGCGTGCA ACTCGCCGGC AACACAACAA CGCCGCCTCA ACGAGGCTTT ACGTAACCTC ATCAGCGTTT GTTGTGAAGC ATATGTCGAT GATATCATCA TTTGGGGCGC GACCGACTCT GACTTAGCGA AAAATATTCG CGCGGTTCTC ACGGCTTTAC GTAACAGCGG GTTTGTTTGC TCGCCTAGCA AGTCGAAATT TTTCGTCGAC TCAGTATCCT TCCTGGGCCA CGTAATCTCC CCCAATCACA TTGGGCCAGA TCCGAAGAAA GTCGAAGCAC TACGCGCATG GCCATCTCCT GGTTGTGTGA AAGACCTCCG ATCTTTTCTT GGCCTTCTCC AGTATTTACG CAAATTCATC CCACACATCG CCACCAAGAC GTCCGTTCTC ACGGCTCTTC TCCCTCCGAA CAAGACAGCA GAGAAAGCGT ATGAATCCCG TAAACGTCAA CTAGCCAAGG GCCTCCCAGC CGAGCGATTA GAATCACTGA GTTGGGTATG GAAGTGGACA ACGTCGGCGC AAGATGCGTT TGAGGCGCTG AAGGAAATGG TGGCACGTAT CACAGGTCTG TCCCCCCTTT CCCATGAAGC TATCCTCGCA GGTCAAACCA ATCTCTACCT TTTCACCGAC GCAAGCAACA CCGGCCTCGG TGCCTGGTTG GGCACGGGTC TATCCCCCGA CAACGCTCAA CCTATCGCCT ACGATTCCCG CTCTCTCACC GCCGCTGAAC GAAATTATCC GGTACACGAA AAAGAGTTAT GCGCCATCAT CCACGCCCTC AAAGAGTGGC GGCCTCTACT TCTCGGCGTC CCGGTGCACG TCATGACGGA CCATGCGACT CTCAAGTGGT TCTTTCAACA ACCAAATCTG TCCGAACGTC AGAAGCGATG GCTACTAGTA CTCGCCGATT ACGACCTCCA GATTTCCCAT ATTCCAGGGG CCACTAATGT CATCGCCGAC GCTTTCTCCC GGCTCCGCAA CTCCGACGCC CACGTCAACG CCCTCACCAT GATGGTTCTC TCACCAAACG CAGCTTTCCT GGATGCAGTG GCTGAAGGGT ATGGGCAGGA CCCAGTAATG AGCATTTGGA GGGAAGTAGA CCGCTGCCCT CCGGGTGTCC GCACAGCCGA AGTCAACGGA GCACGGGGGG TCAGGACGGT GCTGACATAT GAGGACCGGC TCTGCATCCC CGAAGTACTG ACCTTACGAG AACAGTGCCT ACAGGAATGC CACGATGCGA TGGGCCATTT CGGGGTGGAG AAAACACTTG AACTATTGCG TTGTAAGTAC TTCTGGGATG GTATGGCTAG TGACGTAAAG GACTTTGTCA GCACTTGCCC AGCCTGTCAG ACATCCAAAG CTACCACCAC CAAACCTCCC GGACTACTAC ACTCATTACC AGTTCCTCCC GCCAAATTCT CCGACATAGG CATAGACTTC GTGGGGCCAC TACCGCAATC ACACAGCTTC GACTATCTCA TCGTCATTAC CGATCGCCTC ACCGGCTGGG TCGCTCTCAT ACCAACAGTC ACGACGCTCA CGTCCTCCGC TTTTGCTCAA CTCTACTACG ACCACTGGGT TTCTAAATAT GGGGTACCAC AATCCATCGT CTCAGACCGC GATAAGTTAT TCACTGCTGC GTCATGGCGT CGGTTGAATT CCCTCCTGGG CACTAAGCTA AAGATGTCCA CAGCATACCA CCCCCAGACC GATGGTATAT CAGAACGATC TAACAAGACA GTCATTCAGA TCCTGCGCAC CTGGACTGAC GACCAAGGCC GAAATTGGGC AGCTAACCTA CAGCGGGTCG CCTTCGCAAT GAACAACACC ATCCGACGCT CAACCCACCA CACCCCCGCC GAGCTCGTTT TCGGGAAACG CCTGTCACTC ACTCCGCCGC TCCTCCCCTC AACATCAGCT ACGGACCCGT CCCTCGCTCA ACCTACGGCT TCCGAATGGG ATCTCGCTGC CCAACGCATG GCCCTCGAAG AGGGCATCGC TCGTGACGAA CTGCTTCTCG CTAAGCATCG GCAAAGTGTT CAAGCCAACA AACATCGTCG GCCGGACCCT GTTTACCACC CGGGAGACAA AGTCTACTTG AACACAGCTG AGTTCCGTCA TGAATATAAG ACCGCCACTA ACCGTTCTGC GAAGTTCATG CCCCGCTGGG AAGGCCCCTT CACCATCCTC CAGGCATTTC CCGAGCAATC ACTCTATGAA TTGGATGTCC CCGTCACCTC AACACAGTCG ACGCCTCGCC GCCATGTTTC GCGCCTCAAG CCATACCGGG AGTCCGAACA GTATCACCAG CACGCGGTTC CTCGCCTACT CGACCGCCCG GCAGTTTCCT CGCCACGCAT CCTCCAAATC CTTGAAGACC GCACCCTCAC CCCCAAGGGA AATCATCCAA AGGTCTATCA AGTGCGCGCC CGCCTCGCCG GTGAAGGCCC CAAGGCTCGG TGGCTCAGTC GCGATACGGC GCAGGACTAT GCAGGTTGGC AGGAGGCTTG GGAAGACTTT ATTGGCGAAG ATGAGCTACA TCTCGACGTA CTGGACGTTA CTACTGATGT TCCTCAGATG TTCACCCAGG GTTAACGGTC CCGACATGGC CACACTCCGT CGTGAGCTGT ATACACCCTC CCTAACACCC TTTTTTTCCT CATCTACCCC TCAGACCAGG CTGACACCTT CGCACAGATG CCAAACCACC CCCCCCTCAA GTCCCCAGCC CACCCCTGTC CAGGTTTTCA ATTCCGTTCC CCCCTTTTTT TTCCTTCGTG CCGTGTTTTC TCATTTTTTT CTCGTCCGTT TATTTCTCCT TCAGTTTCCT CCCCCCCTTC CTCACGGGCC TGAAGACAGA CAAGAGGTTC CCCCACCCCC CATTTTTTTT ATCCCCAGAC AAAGAATCTG AAAAGAAGCC AAAAGGCCAG GGAGTTTTTT CGTGGTGGGG GTTTCCCTCA GTCAACATGT TTCATGGATT GTCTCTCAGC CTGGCCCCTC ATTGAAGCCC AGCTTCTACA GTTTTCTAGT GTGTGTGTGT CTCATTTCCT TCTTCTCCCT CACATACTCC GTCTCATCCA GGAGGGGGAG GGTGTAAGAG GCTAGCCTCC GACCCAGTGA CCCACGGTCA CCACTTTCCC CAGCTTCTAA TTTCGAGCCG CGTTTCAATT TGCTTCCGCT TCTTCCACCA AGTTGCGCGC GTGTAAGTGC AGAGCACTAT ACTCATTTAT TCTCCATGCA TGCAGTCTTT GTGCATGCAT CCTCCTATGC ATATTGCATA TGCAGGAATT TATGCATCGC ATTTACATGC AGGAATTTAT GCAGTGCATT TACATGCATG CATTCCCATG TATAAGCTGT ATGAATATTC AGCGATATTT GTTGTGTATG TAATCATCCA GATTATGTAA CATTCCATGT GTATAATGTT ACATTTGAAA TACTTAGTAA TGACGTGGCA TTTGATGTGT GTAACTTTAC TTTCTGACAC ACAGTTGGTA CTTAGTAAAA TAGTAGTCGC ATATTGTTGT AGTTCTTCAA TACTCAATCC ACATGTATTA CAACCAGTGC ATGTTTTGCT AGTCAACTAC ACACTATACT ACTACGACAC TCAGTGAGAC ACCCAGTGTC TACACTTTTT TCAAAACAAC GCACACAAAA TAACGCCAAA CGCCCACTCA CCAAACGCTC AAACGCCCCT CATGCCCCCC AAGGGTCAAA CGCTCAAAGA CACTCCTCCC TCGGAGGAGG CAAACGCATC TCCTGTCGAA GGAGACATCA ATGCTCAGGT GGCAGCTGTT ATCCTCCACA TGTCGAAATT AACCAGTCAG CAAAGCCTCT TCGGTACTCA GGGGAATCAC AAACCTCGAG AAGTAACTAT CCCACAAGCC TCCAGCATTC CGAACTTTAC TGGTCCCATT CGTGATGCTC CAGCTGTTCT TCTTCACATT GATCGTCTAG AGAAACTTCT CCGGACTAAT TCGCTTTTTT CCCCTCAAGA TGACGATGCC CAGACAGAGA AACTGCGAGT CATTATCCTG GAGGTGGCGA ACAACTCTAT CGAATGTACC GCGCTGAAAG CATGGGTGAG GACTACTGGT CGGATGATGG AAGCAGATGG CGAGTCGGGA TGGGACGCAT GGACAGTGGC TTTCAAAAAG GCAGCGATGC CGCTCGCCTG GGATCAGAAA GAACTTCGTT CCCTCCTCCG CCTACAGTTC AATCAGGTTA GCGACTGGGA AACCTTCGAT AACCAAGCCA TACAACACCG ACACAATTTG ATGGGCACTG ACCTCTATCC CAGTGACACC TCTATGGCCA CCCTTTACCG CGGCGCTTGT CCCGAGCCAT TATTCATTCG TTTGATGACG ACGCCGGAGT TCAGGAATGG AAGCTTGGAC GAGGTACGCA ACCTGTTAGA ACTGACAGTT GTCAAGTACT TGGAGAACCG GGATCAACCC ACTCACACTC GTATCAAACC GCAAGCTTCG GCCACTCCGC AAAGCCAACC GCACCTGGCA CACCCCCTCA GCCATTATTA TCAAGCCCAC AACCCCCTAC CCTACTACCT CTCGCCTGCG GGCAAACACA TTCGCGAACT TTTCGCCAAA GAAAACCGAT GCAATGACTG CCGCAAGGTG GGCCACAACT TCAAAACCTG TCCCAACCGC CGTGGTCCTA CGCGTGTCAA CTCTCGCCAC GTCGACAACC ACGAGATCCT CATCCAAGAA CTTACCAGTC AGCTTGACGA CCATCTCCAG CTTGAGACGT CTATTGACTC AGACGAGACC TCGTACGCAC TGTTTCATCC TCCTCTAGTC ATTCAAGCCT CTGCTGCCGC TGACGGACGT ACCTCGATTG CCCCTCCCCC TCCTCTCCGA TTTCTCCTCG ACACGGGCGC TGGTACATCC TTCTTTGATC CGTCAGTGGT AGCTAGACTA GGTTGGAAAG TCCGAAAGGA CGCAGTGGAG CGTACTGTGC GGTTGGCTGG TGGGAAACCT GGGCCGGTAG TCAGAGATGT GACGAGTGGA ACGTTTAGGG TTCGACATGC AATATATTCA GGCGAAGGAG TTGTCATGGA GTTGAACGGT ACATATGATG GGATCTTGGG TCTCAATTTC TGCAAGCGCT ATCATCTACT TGATCAAAGT CCTCTTTTTC GGCGTCTCTT GAGCAACTCT GGGAAAGTTC TCACCGGCAA TGACGTCGCC GTTCCCACGA GTCCCCCACC AGTTGCTCAT GATGCGAAAA TTTCTCCTCT CGCCGGGACT GACGTCACCG TTCCCATGCG CCACTCCAAA ATTTTTCACA AGTCAGAAGT TTCGACAACT GCTGCCGCGC CAAACGAAGA CGTCACCGTT CCCACGCCTC ACTCCAAAAT TTTTCACAAG TCAAAAGTTT CGCAAACTCC TGTCGCGCCT CAGCCTTCGG CGATAACCAC CAAATTTTCG GCGATTCCTT CATCAAATTC TGTCTCTCTC GGTGCGGCCG AAACTGCTTC CTACGCCGAG ATCATTGCAC AACTCAAGAA CGACTTTGCA GAAGTTTTTT GTGACAAACT GGGTGATGTA GCCGATTTCC CAAGCATTAC GAAGACCAAG AGTGGTGTTA GGTTCGAAAT CATCTTGAAA CCTAACGCTA CGCCCAGTCA TGCAGCTCCC TACCGGGTTC CTGAAACTCT TTTGCCCCGT TTCCGTGAGA TGATTGCTGA ACATCTGAAT GCAGGTCGTC TACGCTACTC TAGTTCTCCT TGGGCGTCAC CTGCTTTTCT CGTCAAGAAA CCCAATGGCC AACACCGTCT CGTCTGCGAT TTTCGCGCAC TCAATAACCA GACCGTGCCC GACATGTATC CTATGGGAAA CATCCAGGAC ATCTTGCACC GTGCTGCTCG ACGCGGCAAT CTTTTCGCCA AGCTCGACTG TAAGGATGCC TTCTTTCAGA CGTTGATGAA GGACGACGAC ATTCACAAGA CGGCGATTAC AACACCGCTT GGGTTGCTGG AATGGGTCGT CATGCCGCAG GGCATTCGGA ATGCACCTGC TGCCCAACAA CGCCGCATCA ATGAAGCACT GCAAGGTCTC GCTGGAGAAT GTTGCGAGGC ATACGTGGAC GATATCATCA TCTGGGGAAC GGACAGCGAG GATCTTCGTC GAAATTGTGT GAGTGTTCTC GCAGCTCTGC GTCGGAGTGG TTTGCGCTGT TCTCGTGAGA AATCACAGTT CTACCTCACC GAAACCTCTT TCCTCGGCCA TGTCATCCGT CCTGGTCAGA TACTCCCCGA CCCCACGAAA ATCGCACGCA TTGAACAGTT CCCTCACCCC ACGACTCCCA AGGCTTTACA CTCGTTTCTT GGTTTATTGA ACTATCTCCG TGAGTTCATA CCCAGCCTTG CTACTCACGC TTCGGTCTTG CACGCATGTC TCCCTCCCAA CACCGCCGCC GAGAAAGCCT ACTACAGGCA CTTGAAGGAG CATAAGGGCC GTTTGCAAGA GTCATGGCAG GGTTGGAGGT GGAACTATGG GCCTAAGGAA CGGGTAGCCT TTGACGCTTT GCGTCGCGCC GTGAGTACTG TTCCCTGCTT GACTACAATC GACTATGATG CTGTCAAGGC TGGTACTCTC AAGGTTTTCC TCACCACAGA TGCATCCAAA GTCGGCATGG GCGCCTGGAT AGGCGTCGGT ACTACCAAGG AAAACGCTCA ACCTGTCGCC TACGATTCCC GCTCGTTCAA CTCTGCACAA CGCAACTACT CCACACACGA GCGCGAACTC CTGGCCATCG TCCATTCTCT TGATCATTGG CGCCCTTTCC TTTATGGTAT TCCCGTGTAT GCTTTCACAG ATCATTTTAC GCTCAAATGG TTCTTAGGTC AACGCAACTT GTCCTCTCGA CAAATCCGCT GGCTGGACAT CCTCAAAGAC TTCGACGTTC GTATAGAGTA TATCAAGGGT GAACATAACG TCTTAGCCGA CCATCTTTCA CGACACATTG GCTCCGACAC TCTTCCGCCC ACCGATCCCG CCCTGCCCGA GCCCGACAAT TGTATTCTCG CCCCCGTGGT CACCTTCGCT CCCACATTAG CACCGGAGAT TATTCGTACC ATTGCCCAGG GTTATGACCG TGAGAATCTG TTCAAGGACT GGCTCGCTGA TCCTACCACA GCTCCTGGCG TCTCTACCAT CCCCCATGAC ACTCATACTC TCCTCCTTCT CGATAACCGC CTCTGCATCC CCGACGTTGG CACTCTTCGT GAGGCCCTTA TGCGTCAAGC ACATGAAGGC ACTGCAGCAC ACTTGGGCAT AGAGAAAACA GTGGAGGTAT TACGTGAAGG CTACTTCTGG GAAGGCTTGG TTGGAGATGT CCGTGAGTTC GTCCGTGCTT GTCACTCATG TCAACAGGCA AATGCATCCA CCAAAAAACC TGTCGGTCCC TTGCATCCGC TGCCGGTCCC TCGCGACAAA TTCGACGATA TCGCTATGGA TTTTGTTGGT CCTCTACCCA GCGCTGGCGG CCACGACTAT CTCCTCACCA TCACCGACCG GTTAACTGGC TTCATCGAAC TCGTCCCATG CTCCACCACC CTCAACGCTC GCGACCTCGC CCTTCTCTTC TGGAACTGTT GGGTCTCTCG CTATGGCTTA CCGCTCTCCA TCACCTCGGA TCGTGACGCT CTCTTCACCT CTCGCTTTTG GACAACCCTT TGGGATGAAC AGGGTGTCCG GTTGAAGATG TCGACTGCTT TTCATCCGCA AACTGATGGG ACTTCAGAGA GATCAAACAA GACAGTAGGC CAATTGTTGC GGAGTTGGGT TAACAGACAG GGCACTTCAT GGGCTAAGTT CCTTCCTCGT ATTTCTCAGG CTATGAACAA TACTGTCCGT CGTTCTACAG GGTACTCTCC CATTCAGCTT GTCTTTGGCC GCCGCCTCCG CACGCTTCCT GGCATCGCCC GCCCGCCACC CTTCACTCGC GAGTCCATCC CTACTCGTGC TGACTGGACT GCCGCTGCTG CTCAACAAGA TCTCTTCCTG GCCGACGCTC AGGACAACCT GGTCTTGGCT AAGCATCGCA TGGCTATCCA AGCTAACCGC CACCGTCGGT CGGAGATCAT TTACAATGTT GGAGATTGGG TCTGGTTGGA TACTCGCAAT AGACTCAAAG AGTTCAAGTC TGGTGATGGG GATTTCCGTG CTGCTAAGTT CTTCCCACGT TTCCAAGGTC CTTACAAGGT ACTGGCTGCT CACTCCGACC GCTCAGTGTA TACCTTGGAT CTTCCAGACT CTCCCTCTGG CAGTTACACC AAGTTCCATG CCAACCTTCT CAAGCCCTAC CTCTCATCTT CTCGCTTTCA TCAGACCTCC CCTCTGACTT CTTCAGCGCC ATCAAGCCCT TCCTCTAGTT CCCCCCCAAG GTTATTACAG ATTCTGGATG ATCGTGAGTT CCGTGGTCGC CGCCAGCTTC GTGTGGTATT CTCTGGCA
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Protein sequence | |
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