Gene CNM00400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00400 
Symbol 
ID3255196 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp97443 
End bp99405 
Gene Length1963 bp 
Protein Length498 aa 
Translation table 
GC content48% 
IMG OID638254199 
Productexpressed protein 
Protein accessionXP_568441 
Protein GI58262062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.596318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCACCAACC ATCACTCATC ACAACAGCAC TATTTGTTCG ACGAAACCCC TTTCCAGAGA 
TATGTCTACT CCCAGCAACC GGCAAGTTCA GCAACCCCGC TTCTTCTTCC CACCAACTTC
TGTCGCATCG TCACCGGCGA CGCTTAACTT GGGAACGAGC TTAGCGCTTT CCAGACAGAC
TTCGAGATCT TCTCGGCATG GCCATGGACA AAGTGAGGGA AGTGAACATC GGCGTAGAGT
CGCGTATGGG CGTGAGCATC TGCACTCCAG GTCAAGAAGT GGGATACTCT TTGGCGGCGA
GACGAACTCT ACAGGATCTT TGAGTTCCGA CGGCACAGAG CTCCAGATTC AAGAAGCACT
CTCGACTTCA ATAATTTTGG ACAAAGATCA ACAGGTTGTT GCGTTTCAAC CTCGATTTCA
AGGAAGAGCT CGGACGCCAT CGCCCAATCC AACTGAAATG GACATAATGG ACGCTCTTGC
AGATATACAC CGTGGTCTTT ACCTTGGAGA GGAACCTTTG GACCAAGAGG GGGGTAATAA
AAGCTGGGAA CAAAAGGTAG GGAGTCTGAG AAAGGTAATA GAGCAGTATT TTGAGGGTGA
TTGCGGTTAG TACCTTTCCC ATAAAAATTC CGGACCTCAT CGCTATAGCT GATAACAAAC
TTTAGTTTAT GACACCCCAC TTGTCCGACT GACCTCACGC TCATCACTTC TTTCCCACTT
CAGCCTACTG CACCTCCTTT CTACCCTAAC TCTTCCAAGT CTGACTCCTT CCGCGGTAAT
TCGACACGCT CGATCATTGA CATCGGCCTT TATGCTCAGA CTAGTGAATG TCACTCCCAG
AGAAGCTGAT CCCATTCCTA GGTTTCGTAA GAGGGATACA TTTGGAGAAA GAAGGTTTGG
AGCAAGAAGT AGGGGCGGTA TAGGCCAGGG AGGGGCTTTT GGAATCGAAG CAGCATGGTT
ATCATTGGCA ACTATGTGTG CGCCCACTGA AAGAGATGGA GAAGATGGTT GGTGGAAGGT
GTGGGAAGTC AGGGCTGAAT GTAGTGAGAT TGGCGAAATG GAATGTTATG GTAAATTCAT
TATTACTATT ATGGGATTAC TCTCTGACAC GAAGTAGACG GATATCGCTT GGCTATGATA
GACCAGTAAG ACACTTCTTT CACTGACATT CAACCGCAAG CTGACAACTC CCAGCATAAT
ATCTCTTCAC CTGCTCCCAT CATTAACGCG CCCTCTTCCA AGCGAACCCA CCACTCCTTC
ATTCTCCTCC CCATCGCCAT TATCTACCCC TTCACCATCT TCTGCTCATC TCCCCGGAGC
CTTGCATAGT CTTCCAGCTC CGACTTTCGT GAGACGTTTG GTAGGCACAT TAGCAAGTGA
ATTAGATCTG GTTTTGAAGT GGAAGTTGCC GATGACGACA GTAGTAGAAA TGAATGAAGT
CGGTATGTCT ACTTCTCCTA GTAATTCCCC CAGAAGCTTA TCCTGGCTTC TCAATAGGCA
AGGCGACATA TATCAGAGAT ATAGTAGACC TACGCGATGC CGTCGAAACT TTTGTGCCAT
TTGCCAAGCG GTTCGGCTGG TTAACAAGAT CTCTGACCGG CATTGTTTCG AGCGTGTTGG
GTGATATCGT CGTACGAAGC ATCTTACCAA AAAGAGAAGA AATGATCGAG ACAGCTATTA
ATGTTGAAAC TGTTGAAACG GCATACAGGG CCAGTGAGTA CGTTGTTGAA AGCCCTTCAA
GGGAAGGGTC GAAGACGCGA ATATCAACGC AGGGAGGGCA AAAAGAGAAT AGTTTGGGCT
TGCAGAATCT GGGTCGTGGG TCGCATATGG CGCCCGACGT GGACGATGAA GCACTTGTGA
CTGAATGAAA AAGGGGTATC GTATGAGCAA ATAGACTATT GTACCTTCTC GTTCACCGTT
GTATCTGTCG TATCTGGGAT TTGCCTTGTC ATACTTATAC ATG
 
Protein sequence
MSTPSNRQVQ QPRFFFPPTS VASSPATLNL GTSLALSRQT SRSSRHGHGQ SEGSEHRRRV 
AYGREHLHSR SRSGILFGGE TNSTGSLSSD GTELQIQEAL STSIILDKDQ QVVAFQPRFQ
GRARTPSPNP TEMDIMDALA DIHRGLYLGE EPLDQEGGNK SWEQKVGSLR KVIEQYFEGD
CVYDTPLVRL TSRSSLLSHF SLLHLLSTLT LPSLTPSAVI RHARSLTSAF MLRLVNVTPR
EADPIPRFRK RDTFGERRDG EDGWWKVWEV RAECSEIGEM ECYDGYRLAM IDHIISLHLL
PSLTRPLPSE PTTPSFSSPS PLSTPSPSSA HLPGALHSLP APTFVRRLVG TLASELDLVL
KWKLPMTTVV EMNEVGKATY IRDIVDLRDA VETFVPFAKR FGWLTRSLTG IVSSVLGDIV
VRSILPKREE MIETAINVET VETAYRASEY VVESPSREGS KTRISTQGGQ KENSLGLQNL
GRGSHMAPDV DDEALVTE