Gene CNM00360 details

Gene Information

• Locus tag: CNM00360
• ID: 3255181
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: +
• Start bp: 89595
• End bp: 91849
• Gene Length: 2255 bp
• Protein Length: 413 aa
• GC content: 48%
• IMG OID: 638254195
• Product: aspartate transaminase, putative
• Protein accession: XP_568366
• Protein GI: 58261912
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1448] Aspartate/tyrosine/aromatic aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0699842
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCTTGTTTT GGTTCTGCAT TTCTTTCCTG CTCCTGTTCT ATAGACTATA CAGCAACCAC 
ATCTTACAAA ATGAGTGAGT CAGCGCTTCT GAGGGTTAAT CCTCTTTTTG GTCGTGCGCT 
GGTGCGCCCG GAATGTGCCG AGCAGCTTGG CCATTAGACG GTACTGACGA GACACAAAAC 
AGGTTTTACC AACTTCTGGG CTGGTGTTCC CGAGGGGTAT GTTTGTCAAC AACCTTCCAG 
CATGCACAGA TTGCTGACAG TCATGGAAAA TTTAGTCCTC CCGACCCCAT CCTCGGTATG 
CGAATTTCTA CCATGACGAT CCACATCGGA CCGAGCGCCC GGCAGCTGAT TGACAATGTG 
GATAGGTGTG ACTGATGCAT TCAAGAAGGA CACATCTCCA AAAAAGGTTA ACCTTGGTGT 
CGGTGAGGAC CAGTCTCTAT GATGTGCTGC GCCAATTGCT GATTCAAGTT GTTGCTCTTG 
CTCTGTTGCA TTAATCATCT TTGCCCTCGT TCCCCGTTCT GCCCCGATTC GCTCCGTAAC 
ATTATCTCCG GTCGCTCTTA TCGCCAAACT ATGAATACCC ACCCCTACCT TTGATAAACT 
TATCTAAATA TGTTGAATAG GCGCCTATGT AAGTCTTACT TACAGCTTCC CTACTTATTT 
TGAAATGGAC TGACAACGCC TTAGCGTGAC GAGGATGGCA AGCCTTACGT TCTCGACTCT 
GTCTTGAAGG CCGAAGACAT CTTGCACAAG AAGAGGCTCG ATAAGGAGTA CCTTCCTATC 
ACCGTACATC TCATCTTAAT GGCATAGTGT GCTACACTGA CGCGACTTTT ATCTGTATAG 
GGTGCTGCCG ACTTTATCAA GCTCGCTTCT GAACTCGCCT ATGGCAAAGA CTCCAAGCCT 
CTGCGGGAGG GTAGAGTAAG TCATTTCTAT TGACCTATCC CATATTTATT CTAATCAGTT 
TGATCAGGTC GCTGTCTCTC AATCCATCTC TGGTACAGGC GCCCTCCGGA TCGCTACTGG 
TTTCCTCTCC AGTTTCTACT CTGGCCCCAA GGTCATCTAC TTGCCCAACC CCACTTGGGG 
TAACCACGTT CCTTTGGCCG AATCTGTCGG TATCAAGGTC GAAAGATATA GGTATTTTGA 
CAAGAAGACA GTCGGTCTTG ACTTTGAGGG CATGAAGGAG GACATCAAGG TAAGCCGAGA 
TCTTTTTATC CGATAGATAC AGTCACTGAC GTTGACTGTA TAGAACGCCG AATCCGGCTC 
TATTGTATGT TTATCGCAAT ACTCATACTC TTAGTAGACT GACGCAATGT CTACAGATTC 
TTCTCCATGC CTGTGCCCAA AACCCTACTG GTATCGACCC TACGCAGGAG CAATGGAAGG 
AGTTGAGCGA TTTGCTCAAA GCCAAGAAGC ATCTTCCCTT GTTCGACATG GCTTACCAAG 
GTTTCGCATC TGGCGACATT ATCCGTGACG CTTTTGCCGT ACGATACTTT GTTGAGCAGG 
GTCACCAGAT CATCCTCTGC CAATCTTTCG CCAAGGTGAG TATCAATCAT CTCCGTTTCT 
GTAGCTTTGC TGATGAATGA TCAGAACCTG GGTCTCTACG CTGAGCGTGC CGGTACCTTC 
TCCATGGTCT GCGCTTCCCC CGAGGAGAAG GAACGGGTCA TGTCCCAGAT CAAGCGTGTC 
GTCCGACCTC TCTACTCTTC TCCCCCCATC CATGGTGCTC AGCTGGTTGC TACCATCCTC 
GGTACTCCTG AGCTTTACGA CGAGTGGTAT GTCACAGCAG CTGATAATGC ACGCAGTACT 
GACGTTTACA CAGGCTTACC GAGGTGAAGA AGATGGCTGA CCGTATCATC GCCATGCGAG 
AAAAGCTTTA CAACCTCCTC ATTGAGCTCA AGACTCCTGG AGAATGGGGC CACATCAAGT 
CTCAAATCGG TACGTCCATT ACACCGCTGT TTTTTTAATT TTTCTTCATC ATACTGACAA 
CAGAGTGTTT AGGCATGTTC TCTTTCACCG GTATCTCCAA AGAACAAGTC GACGACCTTG 
CCGAGTACGC TCACGTGTAT ATGACCAAGG ACGGCCGTAT CTCCATGGCT GGTTTGAACG 
AACATAACAT TCAGTACTTT GCTGAGAGCT TGTCCAAGGC TGTCAAAGGC GAATTGAGGA 
CCAAGTCGGC ACTTTAGAAG GATGATGATG GATTTGTAAG AAGTTATGAC AAGAAGCTTA 
AATATGCACT GTGATGTGGA AAATACTTCT TTTAA 

 

Protein sequence

MSFTNFWAGV PEGPPDPILG VTDAFKKDTS PKKVNLGVGA YRDEDGKPYV LDSVLKAEDI 
LHKKRLDKEY LPITGAADFI KLASELAYGK DSKPLREGRV AVSQSISGTG ALRIATGFLS 
SFYSGPKVIY LPNPTWGNHV PLAESVGIKV ERYRYFDKKT VGLDFEGMKE DIKNAESGSI 
ILLHACAQNP TGIDPTQEQW KELSDLLKAK KHLPLFDMAY QGFASGDIIR DAFAVRYFVE 
QGHQIILCQS FAKNLGLYAE RAGTFSMVCA SPEEKERVMS QIKRVVRPLY SSPPIHGAQL 
VATILGTPEL YDEWLTEVKK MADRIIAMRE KLYNLLIELK TPGEWGHIKS QIGMFSFTGI 
SKEQVDDLAE YAHVYMTKDG RISMAGLNEH NIQYFAESLS KAVKGELRTK SAL