Gene CNM00330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00330 
Symbol 
ID3255076 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp84712 
End bp86474 
Gene Length1763 bp 
Protein Length405 aa 
Translation table 
GC content51% 
IMG OID638254192 
Producttrans-aconitate 3-methyltransferase, putative 
Protein accessionXP_568382 
Protein GI58261944 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.10395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGG ATGTTGTTGC CCCGACACTG GCGTTCTTCG TCTCGTTCAG CTCTGTACTT 
CCGGCACGAC AGTCGAAAGC TTTATCCAAT GTCCATCTAT GGCTGGAGAG TATGGATTAT
AGGGACAGAA TGGATGTGAG TACGGATATA TCGGTATAAT CGGCCACAGC TCGCTGCTTT
CCGCTGTGTC CACGACGAAC CATACATTCC CTTGTCCATC TTCCAACTAT TCTCCATGCA
CCATCCTCTC AGTTGATATG CACCTCCTCA AGACATCCAC AAAGTCGGTT ATCACCACTA
CACTCTGCTA TAGCAAGAGA TCAATCACCA TGAAGAGCTT TGCAGATTCC TCATTCGACG
TCGAGAGATA TCTCAGCTGT CGACCGTTCG TCGCATTTCT CCTCCTCTCT CTTCTCCCCG
CAGTAGGCAT GCAGCTGACA TATTCATGAT TTTTTTTTAA TGTTTACAGA TCATACCCAC
AAGAAGCATA CGACATCATT CTCGCCTACC ATTTCCACTT CCCACCCAAC CGCTCCGGCC
TTAAAGGTGG TAACACCCGT CTCCTCGACC TAGGCTGTGG ACCAGGCTTC ATAGCGTCCA
CCTTGGCACC CCATTTCGAG CATACCTTGG GGTTGGATCC GTCCCAGAAG ATGGTTCAAG
TTGGCTTGCA GCCTGTGCGA GGTGGAAAGG TAGAATATAG AGTAGGGAAT GCGGAGGATC
TGGATAATGC GGGTGTGGGT GTAGGTGATC ACGGTGTGGA TCTGGTCGTT GCCGGTATGT
TCACTTTTTA CTATGCCCTC TGTCTTCTTG CTTGTTCTTA CTTGTTTTTT TGAACTGCAC
CTTGTGAGCT GATGAATGGC GGCGTAGGAC AAGCGGCGCA TTGGTTTGAC CATTCAAAAG
TATGGCCCCA GCTGACTAAA CATGTCAGAC CAGGTGGGAC TGTCGCTTAC CTCGTATGTT
TCCCGCCCCC CCCGCCCTCT TTATGTACCG CCCTTTAATC TGTACTAACG CTCCTTCCCC
TCCCCTCCCT GCCCTTTTAT TCTCTGATTG GATATGGAAA TTCTGGGAAA CAGGGCTACG
CCGAACTCCT CTTCCCATCG CACCCCCACC TCACTCATCT TTTCACTCGC TTTTCCTCTT
CCCCTCCGCC CCACGGGATT GGGCCCTACT GGTCCCAGCC GGGGAGGGGG ATTGTAGAAG
GGCTATTGGA TCGAGTTCCA TTTCCTGTCA AACCCGGGCC GGGGCCGAGG CGGGCGGAGG
TGGAGGAGGT GGAGAGGGTA GTAGGGAGAC GACCGGTGAT GATGATTGAC GAGCCGGCGC
TGGATCCAAA GCCCTTTTCA GATACGCTTG AATGGTATGA GGCAGAGTGG GCACCGGAAA
CAGCCGTCCG AATCCGACAT ACCCCTTCAT CCCCATTCCT TATGCGCCAA CATTGGACGC
TCGCGCAACT TGAAGCCTAT CTCCGTACGT TTTCCGCGAC ACACGAGTAT TGGAGGGCGA
ACCCCCAAGA CGAAGCAAAG GGGAAGGTGG AGCTAAAAGT GAAGACGGGA GAAGGGGATG
TGGTAGATCG GTTTATGGCG GTGATTAAAG AAGCGTTTGA AAAAGAAGGG GTGGTGGATA
GAGATGGGAA AGGGAGTTTT GATGTAGCTT GGCCGTTGGT GTTGATGATG ATCAAGAAGA
ATGTCTAGTC TCAAGAGCTT TTTCTAGTGT CATGTTCTGA AACGTAGTAG TTTTCTTCTT
TTTAATGACT TGGTGACTAA ATA
 
Protein sequence
MSLDVVAPTL AFFVSFSSVL PARQSKALSN VHLWLESMDY RDRMDIPHST SRDISAVDRS 
SHFSSSLFSP QSYPQEAYDI ILAYHFHFPP NRSGLKGGNT RLLDLGCGPG FIASTLAPHF
EHTLGLDPSQ KMVQVGLQPV RGGKVEYRVG NAEDLDNAGV GVGDHGVDLV VAGQAAHWFD
HSKVWPQLTK HVRPGGTVAY LGYAELLFPS HPHLTHLFTR FSSSPPPHGI GPYWSQPGRG
IVEGLLDRVP FPVKPGPGPR RAEVEEVERV VGRRPVMMID EPALDPKPFS DTLEWYEAEW
APETAVRIRH TPSSPFLMRQ HWTLAQLEAY LRTFSATHEY WRANPQDEAK GKVELKVKTG
EGDVVDRFMA VIKEAFEKEG VVDRDGKGSF DVAWPLVLMM IKKNV