| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00300 |
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| Symbol | |
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| ID | 3255277 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006682 |
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| Strand | + |
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| Start bp | 73459 |
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| End bp | 79246 |
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| Gene Length | 5788 bp |
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| Protein Length | 1701 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638254189 |
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| Product | hypothetical protein |
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| Protein accession | XP_568368 |
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| Protein GI | 58261916 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.212573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGCA GGATGTCCCA GGAAGGGGGC CAGCCTGGCG CGATGGGGTC CACGTCGGTC
CCCCGCTCCG TATCCGTCTC GGATGCCATC ACATTGTTCG AACAAAAATC TCGATCCTCA
TCGACATCAA TGTCAAGATC ATCATCCCGT TCAGTCATCT ACATGAACAC AACATCAAGC
CCTTCTGGGT CTGGTAATGC GGTCAAGTCT GAATCACGGA TAAAACACCC CCCGAGATCC
CCGTCCAACA CAGCGGTATC AATATCGGGT GATGCGCAGC CGCAGTTGGC GGAAGTCAGT
GTGTCGAGCA AATCCCGTAG CATGGATGTT GCCAGTGATA CTGGAGAGGC GAATGAGATC
GGTGTAAGGG GTGTGCCGAC TATCCGACCA CAACGTTCGG CGTCTCGCCC AATGGTCCCC
AAGAGGGTAG CATCAAATAC ATCTGCCACG ACATCCGCAT CACGGACTCC TCCAGCATCT
CCCAGAAATC ATCCAGGAAG ATCAATATCA AACGTATCGT CCAGCTCTTC TCGAGCATCG
CTGGCAAATG GTAGTGCATC AAACAAGGCC ATAGGAATAG GTATAGGTGT CCCGAGCACA
GTTAGGAGCA GAGATGCTCG GAGAGCAAGC GATACTGCCA GCATTCGACC TCGTAGCCCG
CGCACCTCCT ACATTGCACC CAATCGGCAG CCATTCCCAC ATAGTATAAG CGCTCCACGC
AGCCTCAGCT CTCAATCGTA TGGCGTCGAA CATGACGATT TCTCCCCCCG CTCCGAGCGA
TCACAGTCTC CCTTCCATCT CCAACCTGCC ATATCTGTAT CGCAAGCTAC CCCTGAGAAG
CTTCTCCCAC CTCTGTACAT GCAATCCTCA AGGTCAGACT TGCCGAGGCG TACTAATGGG
ATACCCATCC CGTTATCTCG ACATACCAGT ATCTCATCGA CTCCCAGCGC GTATTACACG
CCACCATCAT CAAAATCCCC CATGTCATCA GAATTAGAAC AAAAGGGGGA GGATGTGACT
AAAAGCTCGA TTCTGGATGG ATACTTTCGC AACTCATTCG GAAGAGACTC TTCATTCGGA
CCTGAACCCA TAACATTAGC AACAACACTT GAGCAGACGA GATCCGATCT GTCGATCGCT
CCAGATATGG ATCGCAGATC TAGTGCCATG GAATTGTATA GACGTAAAGA TTCTTCTGGA
TCAATAAGTG AGTCCTTATC TGATTATCTT CGAACGGTCC TTGAAAAGCA ACTGGCTGAT
AATAGCATCC TTTGTAGCCT CCCAGAGGTC TTCCAAACCA CTTCCGTCTT TAGATGTACC
TTTGGGTGAT CCTATTACCA TTGCTTCACC TCAGCAAATA CCGGCAGCCC CTGCTTTGCA
CCACGCCAGC CTGACGTCGT CATTGAATGT TGGCACAATG GCGAGTAACC CTGAATTGAC
GCAACCTCTT CGCAGTACAA CACCTACCGA ATCGCAATCG CAACCACCTC CCCGCAAATC
ACCACGTAAA CCGCCTCCTC CCAATCTCGG TATAACACCT CCAAATCCAG CTTCTCTACT
TTCCACCCCC AATCCGTCAG GATCAGCTAC ACCTGCAGCA ACACCACCTG TCCCACTCAA
GAGTCCATTG AGGAGTATCA GCGGAGGATC CTCGGTGACT TCTTACAATT CATATTCGTC
TGTTGAGATT CCGGGAGAAA TTTCTGTCGA AACTGGAATA GGGCTAGGCT TCGAAGGGAA
ACTGGGACTT GAAGTGGAAG GCAAGGTGGA GAAAGTGAGG AGAGTGAAGA AGCTTGCTTC
GATGGATTCC ATCATTGCCA ATGCTGGTAC ACCGCTCACA AGCCAAACTC GAATGACACG
CCTCGTGTCC GCCACAGCAG ATGATCATAC GTCCCAATCG CCCTCTCAAA AAGACGTGAA
TGCACTGAAG AAGCCGGACG ACGCACGTTT CACCATGCTC ACAGCACCTT CCATTTACTC
GCAAGACTCG GCTCCATCTT CAGCTACGAG CTCGGCTGGG TTGACTGATA GTCCGACAGA
ATCTACCTCC ACGGCAGGGA AGGCTGGAAG TGGAAACGCG TCGGAGAGTA CTAAAGGAAG
TGGAAGGAGG AGGCCGATGT CGGGAGTGTT CACACAAATG GCGGTTGGAT GGGGAAAGAT
GAAAGAGGAG AGGGAAAAGA GAAAAAGTGT TGATCTGGGC AACAGCGGGC ATCGGGTATG
TGCAACGTTT TTGTTTGGAC GAAGTCTGAC GTGATTTACA GAGATCGTCT TCTCTTCCTC
GCCCAAAGTT AGTCTTGCCA GATGAGGGAT TCCTTACTTC TGGTATTACT ACCGAGTCTC
CGGATACTGC CCACACCAAC GCTTCGAGCA CTACAGTGGC CTCTAACTTT TCAACCCGTC
CAACATTAGG TCACACTCCT CTGTCGTCTG TGCCTCCGTC TTCCCTTGGT GCGAGACCAA
CAGACCGATC CCATGGCAAA TCACCGTCAC TCCCTATCCT TCGTCGTTAT CCTACTTCGC
CTACCTCCAC TGATCCGACC TCCAAAGGCA ACTCCATCCC TCCACCTAGT CCTCGACGAG
CTGAAACCTC AACCGCCCTC TCTTCTTTCC TTTCTCCATC TTCTACGACG TCCCCCGCTA
CATCAGGTGT CAGCAAACGA TCACACCTTT TGAGAGAGAT TGCCACATCT GAACGAGCAT
ACGCTAGAGA TTTGAAGCTG GTGAGAGACG CGTATATGTG CTCACATTCC CAACAGTTTC
GAGAAGGATC CTTATCATCC ATGTCGAGCT CTGCCTCCGT ATCAACTTCC GACTCTGACA
AGTCAAAGCG GCGATCAATG TACATGTCCC ACACTCAAAG TCTCAGTGTC AGCCAGACGT
CAAGCACGCA ACGTGAAGCG TTACCTAAAA GCCCCAGTGA AGGAATGAAC CTTACTCTTC
AAGCGGCGCC GCCTGTTGGG GCAATGTCCC CTCCAGTAGG TAAACCTCTT TCACCGGCCG
ATGTCAAAGC TGTATTTTTG AACCTTGATC AGTTGGCGGC TGTGGCTGAG GAGCTGGCAA
CAAAATTCGA GGAAGCTGTG GGAGAGGATG AGGAAGAGGG AAGGGAGTGT GAGGGCGGGA
GTGATCGTAT GGGAGAAGTT TTCGTTTCTA TGGTGCGTAG TGGTATGGAA GAGGTTGGAT
ACTGTTGACA TTTTCGATCA GGTACCGAAA CTCCAACCCC TCTATAGCTA CTTTTGCGCT
CGCCAATCGT CAGCCTCGCG CCATTTAATG ACCCTCCAAT CCAATCCTTC TCATTTTACA
TACCTCTCAC AACGCTGGTC CTCAATATCC ACTCAAACTC GCGCTTGGAA TCTCGACTCT
ATGCTCATCA AGCCTGTTCA GCGAATTACC AAGTATCCGC TACTGTTTGA AGACCTGTTG
AAAATGACAA CCCCAGTGCA TGCGGATTAT TTCAAGATTC GGGAGGCCAA GGAGATGGCA
AGAGGTATGG CGGTGGAGAT TGATGAAGGG AAGAGGAGGA AGGAAGCTGT CGAGAATGCG
ATAGGGAAGA AGAATATGAT GGCTCAGCCG ACAGTGAAGG ATACAAAAAA TTTAGTCAGC
AAGACTCAGG GATCAAAGCT CCTTGGCTTG AAGAGGTTCC GTAAAGATAA ACCGAGAGCC
CCTTCGTCAT CTACACCCGA CCTTGTATCC CCTCAGCAAA TAGCTCAGTC TTCGCTCAAC
CAACTCAGCG AGCTGTCTGC CAGGCTTACT GCTCTTGATG AAGGAGTTAG GAAGATTGGA
CAGGAGATTA TGCTGTGGAC GGCGGCCGCA AAGGAGACAT TTGTAGCCCA GGATGATCTT
GTCAAAACGT GGCTGCATGT CGTGCAACTT GAACCTACCG ACCCGACTGA CCAGAGGATG
TTGGAGATGC GAAGGGTTAT CGACGGTATT GTGTCAGAAG CGTGGGGAGG GTTGGTACGT
TAATCCCTGC GCGAAAGCTC CCTGTAAATG CTGACGGTAA ATTAGAATAT GGAGGTTGAA
GACCTGATAA TACCGATCCT ATCCAATCTT CTCAACTCCA CCAGCAACCC ACGCAGAGTC
CTTTCCAAAC GTTCCGCTAA GCACCCTGAT TATACTCGCT ATCACGCTTT CAGAGTATCG
AAGCGTACAC CAGACAGAGA TATTGTGCAG GGCGCTCTGG AGTTTGTAGC TTTGCATGAG
CAGTTGATCG AAGAGTTACC GACATTCTTA GAAGGATGTC TGAGAATTTT GGATATTGCT
GTTGTCGGGT TCGCAAGAGC CCAGGCAAAA TACTTTCGGA CGACGCGAGA CCGGTTGAGG
GCGTTTGCAG AGGGATGGAT TCAATCGCCT CTTGGTGCCA GTTTGGCCAC GGGCGGGTCA
AGTGGGGAAA GCAATGTGGT AGCAGGGGCG GATATAGTAA AAGCGTGGCA AGAAAGTTGG
GAACCTTATG CGGAAGCCAT GGATAAGTTT GAGTGCACCA AGGCTTGTAA TTCCTCTTCT
TGTCTCAATT CTTTCCAAAG TCGCTGATAT CCGTAGCATT CAAACCAGCC AAGTTGAAGC
ACAAAGATTC CGCTTATCGA GGTGATCTTC ACCCTCCTGG GCTTCGACAC TCTGCTTCTA
CCACTAGCGC ATTTTCACCA CCATCTTCTC GGCCCGAAAG CCCTGCTTTC AGCGTACCCA
CTCGTGTACG GTCGTCCTCG CTCCGCGATT CATTCACCAC CGCCCCAACT ATCATCACAC
CTCATACATC ATCATCTACG TTTGCAAGTT ACGGTAGTCA AGCATTGAGT AAAGACAGCC
AGAGTGCAGG CCGTTTCAAT CTCCTTCGCC GATCCAGCTC AAAGAACAAC ACCAACGCGC
CTTCCAGACC CCCATCCCGC CCCACTCATT CCCGTCGTGG CTCAGGCCTT CGTCCTGCCT
CTCTCGCATC GGACAGCAGT AGGTTGTCTT GGGGCCTACC TCAGATCCCA GCCGAGGGGG
CGGGCAAAAT CTTTGACTCA CTTGGGTTTT CGCCCACTGA CTCCTTTTCA CTCATGTCAG
CGACATCACC GACTTCAGCA TCTAGCAGAA TTGAAGAAAT GGCCGAGAGG TCGCCTCATT
TGGGGGCGAG TGCACCAGAG TTTAGCAGTT TAAGGATGTC GCCTTATTCA CCCAACGGTG
CGTTTGTGGG CCAAGTGCCC ATGCCTAAGC ACCCTTTTGC TGTAAGCCCG GCCAGTGAAA
CTTGTTCTAG GTCTGGATCA AGGGCCGATG CAAGAAGAAT GAAAGGGGGA GAGATTGATG
TGGCAGAAGG CTGGAGAAAT GAAAAGGTTA TCTATCAATG TGCTTGTGTT GCCGACTTGT
AAGTGATTTA GTCTTCCCTG CCATATAAGA AGCTAAATAC GTCGACAGCG AGCCGATTGA
GCTGGGAAAC AAAAAGTACA GAGGTCTTTG GTTCTTACCC ATGATGGTGG GTGACCTTAT
CGAGTGAGTT TTTGCCCTGC TGCACGCCTT GCGTATTGAG AGCCGACTGA CGGGCGTTGA
TCTCAGTGTA TTCCATGAAG TGGGTCGTAT CGAAGAACTG CCTTCTTTCC CGTATCCCGA
AGTCGGCGTT GAGAATGATG GTATCCTCGT TGGACGTGCA GAGAATGGCG AGATTGGCTT
GGTGATCTGC AGTTTTTTGG AGCCGTTAAG GTGAACGGAT CCTGACTTTT ATTCTTCTTG
AGAAGATGAA AAACATTAAA ATCTTGTCTT TTTGATTTGT GAAATAGCAT AGTTGTATTG
TATACATTTG TAGCATTTGG GTTTTTGT
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| Protein sequence | MESRMSQEGG QPGAMGSTSV PRSVSVSDAI TLFEQKSRSS STSMSRSSSR SVIYMNTTSS
PSGSGNAVKS ESRIKHPPRS PSNTAVSISG DAQPQLAEVS VSSKSRSMDV ASDTGEANEI
GVRGVPTIRP QRSASRPMVP KRVASNTSAT TSASRTPPAS PRNHPGRSIS NVSSSSSRAS
LANGSASNKA IGIGIGVPST VRSRDARRAS DTASIRPRSP RTSYIAPNRQ PFPHSISAPR
SLSSQSYGVE HDDFSPRSER SQSPFHLQPA ISVSQATPEK LLPPLYMQSS RSDLPRRTNG
IPIPLSRHTS ISSTPSAYYT PPSSKSPMSS ELEQKGEDVT KSSILDGYFR NSFGRDSSFG
PEPITLATTL EQTRSDLSIA PDMDRRSSAM ELYRRKDSSG SITSFVASQR SSKPLPSLDV
PLGDPITIAS PQQIPAAPAL HHASLTSSLN VGTMASNPEL TQPLRSTTPT ESQSQPPPRK
SPRKPPPPNL GITPPNPASL LSTPNPSGSA TPAATPPVPL KSPLRSISGG SSVTSYNSYS
SVEIPGEISV ETGIGLGFEG KLGLEVEGKV EKVRRVKKLA SMDSIIANAG TPLTSQTRMT
RLVSATADDH TSQSPSQKDV NALKKPDDAR FTMLTAPSIY SQDSAPSSAT SSAGLTDSPT
ESTSTAGKAG SGNASESTKG SGRRRPMSGV FTQMAVGWGK MKEEREKRKS VDLGNSGHRR
SSSLPRPKLV LPDEGFLTSV ASNFSTRPTL GHTPLSSVPP SSLGARPTDR SHGKSPSLPI
LRRYPTSPTS TDPTSKGNSI PPPSPRRAET STALSSFLSP SSTTSPATSG VSKRSHLLRE
IATSERAYAR DLKLFREGSL SSMSSSASVS TSDSDKSKRR SMYMSHTQSL SVSQTSSTQR
EALPKSPSEG MNLTLQAAPP VGAMSPPVGK PLSPADVKAV FLNLDQLAAV AEELATKFEE
AVGEDEEEGR ECEGGSDRMG EVFVSMVPKL QPLYSYFCAR QSSASRHLMT LQSNPSHFTY
LSQRWSSIST QTRAWNLDSM LIKPVQRITK YPLLFEDLLK MTTPVHADYF KIREAKEMAR
GMAVEIDEGK RRKEAVENAI GKKNMMAQPT VKDTKNLVSK TQGSKLLGLK RFRKDKPRAP
SSSTPDLVSP QQIAQSSLNQ LSELSARLTA LDEGVRKIGQ EIMLWTAAAK ETFVAQDDLV
KTWLHVVQLE PTDPTDQRML EMRRVIDGIV SEAWGGLNME VEDLIIPILS NLLNSTSNPR
RVLSKRSAKH PDYTRYHAFR VSKRTPDRDI VQGALEFVAL HEQLIEELPT FLEGCLRILD
IAVVGFARAQ AKYFRTTRDR LRAFAEGWIQ SPLGASLATG GSSGESNVVA GADIVKAWQE
SWEPYAEAMD NAFSPPSSRP ESPAFSVPTR VRSSSLRDSF TTAPTIITPH TSSSTFASYG
SQALSKDSQS AGRFNLLRRS SSKNNTNAPS RPPSRPTHSR RGSGLRPASL ASDSSRLSWG
LPQIPAEGAG KIFDSLGFSP TDSFSLMSAT SPTSASSRIE EMAERSPHLG ASAPEFSSLR
MSPYSPNGAF VGQVPMPKHP FAVSPASETC SRSGSRADAR RMKGGEIDVA EGWRNEKVIY
QCACVADFEP IELGNKKYRG LWFLPMMVGD LIDVFHEVGR IEELPSFPYP EVGVENDGIL
VGRAENGEIG LVICSFLEPL R
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