Gene CNM00250 details

Gene Information

• Locus tag: CNM00250
• ID: 3255184
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006682
• Strand: +
• Start bp: 55852
• End bp: 58015
• Gene Length: 2164 bp
• Protein Length: 577 aa
• GC content: 50%
• IMG OID: 638254184
• Product: vacuole protein, putative
• Protein accession: XP_568436
• Protein GI: 58262052

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.131555
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGTACCATT TCGAGATCTT CTTCTAGAGA GACCCCAAAA GGGAATCTAT ACGAACCGAT 
CATGATTCCG CGAAGCTTGG TAGAACTTTA TGGAAGGGCG AACCATGTCA TACAGCGTAT 
ACTTGGCCCG GAACAACCGC TGTCGGAGGC CGAAGAGCCA ATTCTTCCTA GGTCGTCATC 
ATCTTCATCA ATGGCATCAA CTCAGCAGTC TACACCCTCG TATCGATCTT CAATAAACCA 
AAATCTCCTT CGAAACTCTT TCCCAAAGGC TCTTTATCCA TTTCTATGTG TATGGGTCGT 
GATTTTTATC TGGTTGATCC GTCAGCAATA CTATTATTTT ACGCCTCCTC ACGACCTCAT 
TTCTTGCACG GCTTCACCAT GGGACGATTG GCCCCCTGAT AACTGCGGAA TTAATGGCGA 
GAGATGCGCG GACGACTTGA CATCTTTGTC TGATAGGACA TTCAGATGTA TGAGCGGATG 
TAAAGTTACC AGGCTAGGAA ACGAGAGGTG GGTTGGTAAT GAGCGTGTCA ATGGCGTGCC 
GCTTGTTATT GGTGGCGGGG ATATGAACCA TACGTACCGG TAAGCCCCTT GCTCTCACAC 
CAGTCTATCG ACATTAACAT AACCTTCGCA GAGCGGACTC TTGGATCTGC GCTGCCGCGA 
TCCACTCCAA TCTGATCTCC TCTTCTCTCG GCGGATGCGT CACCGTCCAT CCCTTACCAT 
ACCCTGCCGG CCATTCCAAC TTTATCTCGT CTGCCGCTCA TGGCCTCACC TCTACAGCAT 
TTTCTCAATA CTTCCCAGGC GCGTTCACCC TTTCACACGT TATCCCCTCT GGCTGTTGGG 
ACTTGCACTT TATTGTCATG GGCGTCAACG CCGTCTGCCT GCTCATCCTC ACCCTCTTCC 
TCCGTCCTCC TTCTTCTCTC CTATTCACTA TCCTCCTTGT TCTGGGATAT TTCCAAATCA 
CTTTATTTAG CGATGTCCCA CATTTCCCGC CAGACTGGCA ATCCCTTTTC GGCGGACTCA 
TTCCTGTGCT GATCACAGGC TACTGGATCT GGAAACAGGC TTTCGTCATC ACTCTCCTCC 
ATTTTCGCGA CGCACCATTT ACCTTAGCGC TTTGGCAGGG CGCAGGATAT TGGGTAGGTG 
TGGAGAGTTC AACAGTCTTT GCCAGGTTTC CCATCAGCAG GCTCGGGTAT GACACTCTTA 
CTCCATCTGG TCTTCTGGCT CTTGTGATCA TCGTGGTCCT GATCCACGTT GTCGTCGGAT 
ACCAAGCGCT CGCCATGCGT AAGCAGGGTC TACTCCGATA CTACCTCGTC CGCTATCTCC 
CTTTCATACC TATCCTTCTC ATCCTTTCCA ATATCCCATC TTACACCCTT CGACTACACC 
ATTACCTCCT TGCTCTCCTC GCTATCCCGG TTTTGTCCCT CCCCAACCGA CTTAGTTTGG 
TGTTACAAGC ATTCATGCTC GGTTTATGGC TAGACGGCGT TGGAAGATGG GGTTGGGCTA 
GTTTCCTCGA AAAGACTTCT TCTGTACGTC CATCCCTCTC CGCTCTTCCT TCTCTTTTTC 
TCTATCTTCA AGATCTTGGA CGCAAAGAAC TAACCACCTC CCCTATCCGT CTTTCTTTCC 
TCCTCCCACA GCTTCTCGGC GATGCCCCCT CTGGCTCATG GACACCCACA TTTTTCGCCA 
ACCTCAGCTC CCCTCATACC CTCTCCTGGT CACCCATCAC CCCCGAACAA GCTGCGGAGG 
ATGTAACCGG GTACTCCATC TTAGTCAACG ATATGCAGGC GTTTGCTGGA TGGGTGAATA 
GTAGTAAGTG CAGTGATCCG CCTTGTTCTT TGCGTGAGGA TTCAGATTGT GGGACTTACG 
CGCTGTTTTT TCCTCCTTCT TTAGCAATTG ATTTGAAAGG TGTACTGCGG GACGGGGTGA 
ATTATTTCCG TATCGCCGTA CGTCCACCGT CTTGGCCTCT CTTTAACGGG TGTGCAAAGG 
CTGACCAGAT GGAATAGTAC GAGAAGAATG GAATGTCAAT GGACTTTAGC GACCCCATTG 
TCCGATGGAA GAATGGTACA TGGGGAGGCA TGGAAGAGCC TGTAGATCTT TTTTAGAGTG 
TAGACTACTC CTGTTTGTTG CGCATCATTA TTTGGGATGT TGTATTCACA TTGTATGAAC 
AATT 

 

Protein sequence

MIPRSLVELY GRANHVIQRI LGPEQPLSEA EEPILPRSSS SSSMASTQQS TPSYRSSINQ 
NLLRNSFPKA LYPFLCVWVV IFIWLIRQQY YYFTPPHDLI SCTASPWDDW PPDNCGINGE 
RCADDLTSLS DRTFRCMSGC KVTRLGNERW VGNERVNGVP LVIGGGDMNH TYRADSWICA 
AAIHSNLISS SLGGCVTVHP LPYPAGHSNF ISSAAHGLTS TAFSQYFPGA FTLSHVIPSG 
CWDLHFIVMG VNAVCLLILT LFLRPPSSLL FTILLVLGYF QITLFSDVPH FPPDWQSLFG 
GLIPVLITGY WIWKQAFVIT LLHFRDAPFT LALWQGAGYW VGVESSTVFA RFPISRLGYD 
TLTPSGLLAL VIIVVLIHVV VGYQALAMRK QGLLRYYLVR YLPFIPILLI LSNIPSYTLR 
LHHYLLALLA IPVLSLPNRL SLVLQAFMLG LWLDGVGRWG WASFLEKTSS LLGDAPSGSW 
TPTFFANLSS PHTLSWSPIT PEQAAEDVTG YSILVNDMQA FAGWVNSTID LKGVLRDGVN 
YFRIAYEKNG MSMDFSDPIV RWKNGTWGGM EEPVDLF