Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM00230 |
Symbol | |
ID | 3255102 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | + |
Start bp | 52163 |
End bp | 54041 |
Gene Length | 1879 bp |
Protein Length | 543 aa |
Translation table | |
GC content | 53% |
IMG OID | 638254182 |
Product | hypothetical protein |
Protein accession | XP_568370 |
Protein GI | 58261920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.616426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGTC GTTCGTTATG TAACCATCTG GGAGATAGCT TATGCGGATA TAATAGGCGG CATGTACATA CTGCCAATGG AAAAATGCCT CGATCCTTAC CGAGGATGAT TGGTCTTCTG GATGCTCCTC GTATACATCT ACTGGGTAAG CGCAACTGTT CTCTCTATTT CTCTTTCCCC GCTTTCAGAC TATAGGTACG CTGACGACAG ACACTCATCA TCTAGTCTCG GGTTCGCAGA AGCGGTTGAG CAAATCCCTA TATGGGCGTT TAGACCCTCT TCAAACGATA GTGGGGCGTG GGACCCATCC GTTTCAAGCG TTACAGCTGC GGCTAATACG GGTTCATGGA CCACGACACT TTCAAGAAGC TTTGCGGATG CCAGTAAAAC CACAGCTGGG AATCCGGCTG TGACGACTGC GAGAGTAAAC GTGAGCGGAA GCGGGGTCAG TGAAAATTCC ATCTGGGTCC AAAATACGGG CACTGAGACT GCTTCTTCCA CCTCTACTTC CAACTCGAAC TCCACTTCTT CTTCCGACAA AGACGGCGAC AGCAATGATT CATCTACGTC CCACTCCATC CCTCTCGGTC CCGTTATAGG TGGCGCAGCA GGGGGCCTCA TCGGATTGAT AATCCTCTTC CTCCTCTGGA GATGGTATGT CAACAGCCGA CATCGTCTTT CCAACCCCTA TTCCCCCTCT TCCACTTCCC CCGGTTTCGG CGGACGGATC AAGAAGGAAA AGCAGAAGAA GAAAAAGAGG ATGTCGTACC CTTACCCAGC CAATACCAGA GATAGCTTGG TTGCTTCCCC TCCTGTCTTT GCTTTAGGCG GTGGGGTTGG GGGAGATGAA GAAAGAGGAC AATCGAGAGG GAGAAGTTTC CTAGATATGC TAGTCGGTGG TAAAGGGGAT GAGAGCGGAA ACTGGAAGGG ACAGCAGAGG GATACGGCGC TGTACAGTGA TCCGACGACA TTCGCTGACC CGAGGAAAGC ACCGGAGCCC TATTCGGCCA GCCCGATGAA ATGGCGAACC ACAAGCGAAC GGTTAACACT AGAAACAGAT TTATCAGACT CTGAGTCGGC TTGGAGCGTG AGCGACGATG GTGGTGAGGA TGACGGTCGA AGAAAGAAAA AAGGAAGATG GAAAGAGGCG TTTATACCTT CCATCGCAAT GGCAGCAGAA GCCAAGAAGA AGGCAGATAG AAACAACAGG AAGCTGAGCA CGTATACGAC GACATCTCAA CAACGCTTGA CAAGACGGAC GTTGACGCCT TCAGAAATGG AAGAAGACGA GGGGGCGCCT TTCCCACTCT GCGTTCGTCC AGAATCAATT CTCACCCCGA TTCCGAGTAC GAAGACACAG CCCCTCAGCA CTGTGTCACA TCCAGGACCC AAAAACTCCA AGCCAACCAC AAACCAAACT CCAAAGACAA GCCAAAGCAA CCGGCAACTG CTAACCTTAC CCCCCAAGCA ACCTCCCCCG GCGCACCTCC CGCCTCCAGC CCCAGATGAA GCTCAGTCGC TCTCGCTTCT GTCACCTCTT GGTGGCAGAG TAGATTTCTC CCAACCACCG TCCATCCGAC GAGAAAGGAT CTCAGAAAAT CCTACGCTAC CTTCGTTGTA CGAACCTCCC ACAGGGGCTA GGACGTATAG GGCTTCAAGA GGGTCAGAGA TGTTCAGTCC TGGTTCAAGG TATATGGGGA CTATCTATGG AGACGGTGGG GATGAAGACG GTGCTAGAGG CGGAGGAGAA GGAAGAAGGT TCAGTGAAAG TACGATAGGG ACCGCGTTAG GGAGCGCAAG GTCATTCAAA ACGCGAGATG GAAGGGGAAG GTGGAGTGGG GAGAGTGCAC CCGCTTTGCC GACGCCCAAG CCGAGGTAG
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Protein sequence | MAACTYCQWK NASILTEDDW SSGCSSYTST GLGFAEAVEQ IPIWAFRPSS NDSGAWDPSV SSVTAAANTG SWTTTLSRSF ADASKTTAGN PAVTTARVNV SGSGVSENSI WVQNTGTETA SSTSTSNSNS TSSSDKDGDS NDSSTSHSIP LGPVIGGAAG GLIGLIILFL LWRWYVNSRH RLSNPYSPSS TSPGFGGRIK KEKQKKKKRM SYPYPANTRD SLVASPPVFA LGGGVGGDEE RGQSRGRSFL DMLVGGKGDE SGNWKGQQRD TALYSDPTTF ADPRKAPEPY SASPMKWRTT SERLTLETDL SDSESAWSVS DDGGEDDGRR KKKGRWKEAF IPSIAMAAEA KKKADRNNRK LSTYTTTSQQ RLTRRTLTPS EMEEDEGAPF PLCTSQSNRQ LLTLPPKQPP PAHLPPPAPD EAQSLSLLSP LGGRVDFSQP PSIRRERISE NPTLPSLYEP PTGARTYRAS RGSEMFSPGS RYMGTIYGDG GDEDGARGGG EGRRFSESTI GTALGSARSF KTRDGRGRWS GESAPALPTP KPR
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