Gene CNM00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00160 
Symbol 
ID3255103 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand+ 
Start bp35860 
End bp36899 
Gene Length1040 bp 
Protein Length291 aa 
Translation table 
GC content48% 
IMG OID638254176 
Productconserved hypotetical protein 
Protein accessionXP_568377 
Protein GI58261934 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0544501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAA AGAGAGCCAA GACGTACAAG AGGGTAATGA CCCTTTACAC CCAGACTTTT 
GGATTTAGGC AGCCCTTCCA GATCTTGGGT GAGCAATGCT TTTGATCTTA TTTTCGGTAT 
ACTAATGTGA GGCACTAGTT TCCCAGGATT TGCTGCTGGA AGGAGCCAAG TCAGAATTGA 
ATATGCCTAA GCAGTTTGTC ACCGTCATTC AGGGCGAGTG CAAGCCAAGT AAGTCCTAGA 
CAACCATGTA CTACCATTAA ACCAAAAGCT GATTCTGTTC GCCCATCAAC AGTGATAACG 
CAGTGCTGTA TGGAGGCGCT TTATAAGCTT GGGAAACCCG TACAGAGGAC AACAGATCTT 
GCCAAGACGT TTGAAAGACG AAAATGTAAT CACCGAACAG CACTAGAACC GGATGAGTGT 
TTGAAGGACG TTATCGGTGA GTCTTCTCTC TATCCCAAAC CATCGTTGTA ATGAGCTTAC 
AGCCAGATGC AGGAGCTACA AACAAACATC GATATATCCT CGGCACCCAA TCCACCACTC 
TTCTCACCGC TATGGACCGT ATCCCCGGTT TACCCGTCAT CCACTTTAAC CCGCGCGGCG 
TCCTCGTCCT TTCCCCACCA TCGACTGCCA CTATCCGAGA GAAGAATAAA GTAGAGGAAG 
AAAGACGTTT GGAGGGAGTC AAGGTCCTTG AAGGTGTTGT TGATGGAGGA AACGTGGTTG 
GTGCGGATCT TGCGCCTGTG TCGGGTGGAC CAGCAGAGAA AAGGAGTAGA AAGGTGAAGG 
GACCGAACCC GTTGAGTGTG AAGAAGAAGA AAACTCCAGG CCAGGATAAG GAAGGGGAGA 
GTAAGAAGAG GAGAAGGGTT GAGGAAGAGG AAGTGAAGGA GGATGAGAAT GAAGTGAATG 
CGGAGGGGAA AAGAAAGAGA AAAAGGAAGA AGAAGAAGAC TGCGGTTGGT GAGGCGATTG 
AAGAGTTGAA TGCTACGAAT GCCGATCGGA CGGAGAAGGC GGTTGTTTCT GATGATAGTG 
ATGGCAGTGA AGAAGAATAG
 
Protein sequence
MRQKRAKTYK RVMTLYTQTF GFRQPFQILV SQDLLLEGAK SELNMPKQFV TVIQGECKPM 
ITQCCMEALY KLGKPVQRTT DLAKTFERRK CNHRTALEPD ECLKDVIDAG ATNKHRYILG 
TQSTTLLTAM DRIPGLPVIH FNPRGVLVLS PPSTATIREK NKVEEERRLE GVKVLEGVVD 
GGNVVGADLA PVSGGPAEKR SRKVKGPNPL SVKKKKTPGQ DKEGESKKRR RVEEEEVKED 
ENEVNAEGKR KRKRKKKKTA VGEAIEELNA TNADRTEKAV VSDDSDGSEE E