| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00110 |
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| Symbol | |
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| ID | 3255234 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006682 |
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| Strand | - |
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| Start bp | 24854 |
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| End bp | 26967 |
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| Gene Length | 2114 bp |
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| Protein Length | 478 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638254171 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative |
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| Protein accession | XP_568380 |
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| Protein GI | 58261940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0438668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTGCACAC CAAACGGGCA AGCTCAGAAT TGCTTGCTGC CTCGGTTCTC TTATTAAGGA
GATGTGGTTT GCATGTCTAC GACCGCTACC GACGACATCC AAATTCCGTT GTTCAAATGT
GTTTGGTTCG AAATCCCGAC AATGTCTGCC GAGAGCCGTA AATGTGAAGC TGAAGCCTTT
GGTCCGAATG AGGAGTAGCC ACAGTTTGGC TGAAAGGGAG CTTCGGAGCC TTCTGCCGAC
CATGGAGGAA CTCGGTCTGA GAGAAGGTGA TCACGGTATG TATGCAAAAT ATTTGAAGTA
GTTGTATTTC AGACTGATCT TTTTTGTACA GTAACTGTTG GTATGTCAGG TGGGGTCGAT
TCTGCAACAA CGTTGCGAAT ATTACGAGAG TTTGTGCGTA TCTGTCACCT CCCATTTGAC
CGCTCAGTGC TAATCAAAGC TAAAAGCCCA TCCATCTTGA CGTTGTATTC ATGCGCAACT
GGGACCCTCT ACTATCTGAA TCGCCTCCTG AATCTTCTTT GCCACCATCT CCCATATCTC
TAGCATACTC TTCGGGCTCA ACCTCGAACA GAGAGCAGAA TCTTTCTCCT TGCCAATGGG
AGCGAGATTG GAATGATGTC CTAAAAGTGG CTACACAAGT TGGGATCCCA AAGGACTCGA
TCAAGCTTGT AGATCTGTCG AAGGAGTATT GGAGTAGAGT GTTTGAGCCC GCAGTGGGAG
TATGGGAGAG GGGGGGAACG CCTAACCCAG ATGTGGATTG TAATAGGTAC GTCATAATAA
TACTGACATG TTTATGATCG GCTGATAATG GAATGTAGAG AGATCAAGTT TGGTGCTCTG
TTGGATGTCT TGCCAAAGAA AGACAGGCAT TTCCTTGCAA CGGGTCATTA TGGCCGTGTT
GCTCACGTCC CTCTACTATC ACATCCAGGA CCTTCAAAGC TTCTACGAGC AGTGGATAAA
TCCAAAGATC AAACCTATTA CCTCTCTCAA ATGACCGAAC AACAGCTATC TCGCGTACGT
TCAAAAGTAT ATTTCTGTTT TTTTGCTCGT GTAAGCTGAA TAAATGTGTG GTAGGCAATT
CTTCCACTCG GAAGTTTATT AAAAACCGAC GTCAGACGAC TGGCAGAGCA TTGGGGTTTA
CCAAACGCAA AGAAGGAAGA GTCTATGGGC GTGTGTTTCA TTGGGGAGCG GGGAAAGTTT
GGAGATTTCA TCTGTGCGTT ATATATCGCA TTACTCCATC AGTTTATTCA TTGCTGGGCT
AAATCATAAT CCACCATCCA CCGTTTATTA TGCCCATCTT GACTTTCCAC CCACAGCGCA
ATACACGTCC CCACCCGAAT CAGGCTATCT TGTTAACCTT TCCGGTGAGC GCTTGGCAGA
GCACAAGGGA CTCTGGTACT ACACCATTGG TCAACGGGCC AGGGTTGCGA ATCAGTTGAA
ACCCATGTTT GTCGCAAAGA AAGGCGTAGG GGAGAAGGGG ACTGATATAT TAGTCGTCCC
GGGATCGTGA GTTTTCTCCA TCTTGTTATC CCCTCCTCTT CCCCCTTCCG ATTGGTATGG
ACAGGGAAAG GAAGAATGCG ATTTACGGAT CTGACGGGTA TTGTAGGGAC CATCCGATGT
TGCTCTGCAA AAGTGTTCAT ACCTCCGATT TCCACTGGAT ACACGACACA TTCCCACGAG
AATTGCTTGT GAAAGAACCG GAGAAAGTGG GTATACAAGT CAGGCATAGG ATGAATCCTG
TTGGCGGTCG AATCGTCGTA GGTGGTAACG TCAAGGAGTG AGTCTATAGC TTTGTCCTAT
AATTTCTTAT ATCGCCTTGC CCCCAAGAAA TTGTGAGTAG CTAATGAAGT GAAATGAAAG
TGTGACTGTA GAGTTCAATG ATCCGATCGT CGGCGTGAGC CCTGGACAAG TCGTAGCCAT
CTGGCATGAT GGTTGGTGTC TTGGAAGCGG GGTCATCGAC GGTACAAAAT GTGAAGGGGA
AAATATGAGG GGGGGGACGG GGTGAGATGG GAGTGTGAAT GAGATAGAAG ATATTTTGGC
GGAATGAGAG AGATCTTGAG GGGGGGGGGG ATCGAAAATT CCACCATATC ACCATAGCAT
CATAAAACAC ACAA
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| Protein sequence | MWFACLRPLP TTSKFRCSNV FGSKSRQCLP RAVNVKLKPL VRMRSSHSLA ERELRSLLPT
MEELGLREGD HVTVGMSGGV DSATTLRILR EFPIHLDVVF MRNWDPLLSE SPPESSLPPS
PISLAYSSGS TSNREQNLSP CQWERDWNDV LKVATQVGIP KDSIKLVDLS KEYWSRVFEP
AVGVWERGGT PNPDVDCNRE IKFGALLDVL PKKDRHFLAT GHYGRVAHVP LLSHPGPSKL
LRAVDKSKDQ TYYLSQMTEQ QLSRAILPLG SLLKTDVRRL AEHWGLPNAK KEESMGVCFI
GERGKFGDFI SQYTSPPESG YLVNLSGERL AEHKGLWYYT IGQRARVANQ LKPMFVAKKG
VGEKGTDILV VPGSDHPMLL CKSVHTSDFH WIHDTFPREL LVKEPEKVGI QVRHRMNPVG
GRIVVGGNVK DVTVEFNDPI VGVSPGQVVA IWHDGWCLGS GVIDGTKCEG ENMRGGTG
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