Gene CNM00090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00090 
Symbol 
ID3255233 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp20341 
End bp22384 
Gene Length2044 bp 
Protein Length401 aa 
Translation table 
GC content55% 
IMG OID638254169 
Productglycoprotein, putative 
Protein accessionXP_568387 
Protein GI58261954 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.107254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCGCCCCGC CCCTGTTCCC CGTTCCCCTC CCCCGTTCCC CCCACCAGCC CTTTCCACCC 
GCCCTTTCCA CCCGCCACCA CCATGCTCCC CCTCTCCTTC CTCCCTGCCC TCCTCGCCCT
CGCCCCCCTC GCACGGGCGC AGGTGACTGC CACCTACCCC AACGGCGCCA CGAACCCCGA
CACCCCCGAG TTCGCCCCCA TCGGCTCCTA TGTCAACCAG AGCTCCGAGT CGCGCCTCAT
CTCCCTCAAC GGCGTCGACG ACTTTTGTCT CTGGGGTCCC CGCAATATCT CGGCGGTGAG
CACTAATCTG ATAGGGAATA TCGAGCCGGA AGTGGTAGCG TACTGTTCCA AGCCGAGGAA
TAACGCCAGG ATCATCCCAG ACGGGGTTGT TACTGCTGCC CACGTGGGTC GACTTTTCTC
CCTTTTCTCC CGATCGAACG CTAACCATCG ACGGGTAGTT TGTCAAGACC GCGCTGTACG
TCCAGATCTG GGGCTGTAAG TCGTCTCTTT TCTGTCGGCC GAACAATCTG ACACTGATGC
GCTTTGTCCC ATTCCAGTCT GGGACGCGAC CAGGATCGGT ATTGTACGTC GCGTTCTACA
CTGCAGAGAT GTGAGGAGTC AAGACGAGAA GCTGACATCC GTCCAAAGCC GGACGGCGAC
TCTGGCGGTG AACTAGACCC CCATGGCGCT GAAAACCTCG GAAACCCAAT TGGCGGCAAC
GCCACTTCCA ACGTCGATGG AACCGACGTG TTTTACGAGG AATGGATGAG CTTTGTAAGT
CGCTCGTCTC TGTCTCTTTC TCCTTTCCAA TCTAATGGCG AAATCAATGG ATAGATCTCG
TACGACCAGT TCTGTCTCCG TATCTGTACA GCCGAAACTT CAAACGTGAC TGCCGCATTG
CAGTGCGAGC ATGAACTTGA CATCATGGGT TGTGCGTTTG TCATGGCTAT CGAGTACGTG
TATTTCTCTC CTCCCATACC TGCCGGCCTC TGCTAACGCC ATTCGTCTCT TCTCGCGCAT
CACAGCGACT TTTACAACAC CAACAACTCT TTCACATCCT GCGACGGTGA ACCTGCCGCC
CCACCCGGTC TCTACCCCCA GGCCAACGGA TCGACCTCGA CTTTCCGACA GCGATACACC
GGTACTTGGT CCAACGCCGA AACGACCGAC ATGTTTACTG TAGGACAAAC AGTTACGCCC
AGTAGTGTTG CTTTGTGAGT TTTCATACTT TTTAAGTCTC ACCTATCGCT TTCGATCAAG
CTGATGCCAA TCGGCGATTA GCTACCCGGC GACATCCAAC TGCTATACCT ACTCTACCAT
CTCTAGTACG TCCATGCCCC TTGCCCTTCC AATCCACCCT CCACGCTAAC ATCCTCCACT
CACTCCTTGT CACTCGCAGA CGGCATCGAC ACGGCCAACT GGCAAGTAAC GGCCACCCCT
TCCACCCTCT CCGGTGGCTC CACCGTCGCC GTCGCCTCTG TCGGCACCAC CTCCCAGTCC
CCTCCTCCCG GTATCTCCAC CTCTTCCCCA ACTTCTTCTT CTTCTTCTTC CGGCTCTTCT
GGCTCATCCG CCGGCAGCTC TTCCAGCTCC AACACGGGCA GCGCGTCAAC CGGTGCAACA
GCCGTCGATT CTTCCGGCTC GTCCTCTGCC GCAACCAAGG CTTCCACCGT CCACGGACAA
GGAATCGTCG TCATGGGTGT TGCAGCTGTC GGAATGCTGT TTGGTGCTGC CGTCTTGCTT
TAAATTTGAA GAAAAAGAAA AGACCTTTTG ACAAGCCCAA GCCAACTACC TCCCCGACTT
TCCTAGTCGA ATCTATCCCG CGTTCAGCCA AGCGTAGCAT TTCTCTCGCA TCTAAACCCC
AGAAACTTTC GAACCATTTA AAATAAATCA ATACTTGATG TACATAGCTA ATCATGTCTT
TTTCGAGCCC CGGATGATTT CTGAACGTGT CGTCTTCTTT TATGAATTTC TCATGGACTA
TTTCTTCTTT TTAAAACCTT GTGGTGGCAC TTGCTCTCGT CGTCCTTTTT TTCCGTTTCG
GTTC
 
Protein sequence
MLPLSFLPAL LALAPLARAQ VTATYPNGAT NPDTPEFAPI GSYVNQSSES RLISLNGVDD 
FCLWGPRNIS AVSTNLIGNI EPEVVAYCSK PRNNARIIPD GVVTAAHFVK TALYVQIWGF
WDATRIGIPD GDSGGELDPH GAENLGNPIG GNATSNVDGT DVFYEEWMSF ISYDQFCLRI
CTAETSNVTA ALQCEHELDI MGCAFVMAID DFYNTNNSFT SCDGEPAAPP GLYPQANGST
STFRQRYTGT WSNAETTDMF TVGQTVTPSS VAFYPATSNC YTYSTISNGI DTANWQVTAT
PSTLSGGSTV AVASVGTTSQ SPPPGISTSS PTSSSSSSGS SGSSAGSSSS SNTGSASTGA
TAVDSSGSSS AATKASTVHG QGIVVMGVAA VGMLFGAAVL L