Gene CNM00070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM00070 
Symbol 
ID3255108 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand
Start bp17330 
End bp18820 
Gene Length1491 bp 
Protein Length199 aa 
Translation table 
GC content51% 
IMG OID638254167 
ProductRho GTPase, putative 
Protein accessionXP_568391 
Protein GI58261962 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.261976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGATTCGCGG CACAGCGCAA CAGCCCAGGA TGGCCATGCA GAGTATCAAA TGTACGTCGT 
TCCCTTCTCC CGCCGCTCAG CGCTGACTGT CCCACCCAGG CGTCGTCGTC GGTGACGGCG
CCGTCGGAAA GGTACATTAT CATCCCATCC CTCTCAATCC GCTACGCCAT ACTAACCGCA
GCGACGGCGT GGATAGACAT GTCTCTTGAT TTCATACACC ACCAACTCAT TCCCCGGGGA
ATACGTCCCG ACTGTGTTTG ACAATTACTC TGCCAGCGTA CTCGTTGATG GCCGGCCGGT
CAGTCTGGGA TTATGGGATA CTGCCGGGCA GGAAGACTAT GAGTGCGTTT TCCCGTCTCT
CTTCTTCTCT TCTTCTGCTT TTGCACCTAT TATTTATCCC TTCTTTCGCA CTGTCCTTCT
TTACGTCCCT TTCTTCATCT CCTTGATGTG TGACGCGTGA ACAAAAAGTG GCTGACATCA
CCCCCCATTC CACCTTTCCC ACCACTCGAA ACAGCCGACT AAGACCACTA TCCTACCCAC
AGACCGATGT ATTCCTCGTC TGCTTCTCAA TCGTCTCTCC ACCAAGTTTC GAAAATGTCA
AAACGGTAAG TCATTGGAGT CTTGGATTTT ATGGATTCTG GAGGAATCGG ACGCGTCTGG
AACCGTCTTG ACTTGAGCTG ACCATTTTCC CGCTTTTGTC GTCCATTGCA TCGTAAAAAA
AACGTCTTGG AAAATAGAAA GTAAATCTTT CTCGTGCTTT CCCCCGCGCC ACCCACGCTA
ACACTCCCTT GCCCACCTAC AGTGGATCCC CGAAATCCGC CACCACGCTC CAACGACTCC
CATCCTTCTC ATCGGCACCA AACTCGATCT CCGGGACGAC CCTGTCACCC TCTCACGGCT
GAAAGAACGC CGTTTCCAAC CGATCGGGTT TGAGATGGGT GTCAGATGCG CGAGGGAGAT
TGGGGCTGTT AGGTATTTGG AGGCTTCCAG TCGGACGTGC GTTTGTTGCC TTTCTCTTCT
TCTGCTTTCC GCTAACGGTA ACTCTTGTTG GAAAATAAAT AAACAGACAA AAAGGCTTGA
AAAACGTATT CGACGAAGCG ATCCGTGCGG TACTCAGTCC TTCTGCAAGG GACGCGAGGG
AGAAGAAGAA GAAGAAACAG CAGTGTTTGA TTCTCTGAGC GGCCGCTTTT AAACGAGGCG
GTTGTCTAGT AGGGCGCGAG GGCACAGCAT GCGAGAGACA TTTAGATTTA GATGGATTGG
CCGGCGGGGC GGGGGGGTCA TAGGGAAGGA CAAAGATGAG GCGGAAAGGT TGGAAAGAAG
GTATCACCAA GAGAAAAGGA AAAAAGGTAC TGCCCCCGAG TTGACCACAA AAACCAAGCA
ACGATCACTG TCATACGGGG TAGTCGTTGA ATTTTTCTTT TTTTAGCATC TTTTTGGATT
CATCGATTGA TCAAGTTTTC CCCTTTTCCC ATGCAAGCAC TGTATTTTTA T
 
Protein sequence
MAMQSIKCVV VGDGAVGKTC LLISYTTNSF PGEYVPTVFD NYSASVLVDG RPVSLGLWDT 
AGQEDYDRLR PLSYPQTDVF LVCFSIVSPP SFENVKTKWI PEIRHHAPTT PILLIGTKLD
LRDDPVTLSR LKERRFQPIG FEMGVRCARE IGAVRYLEAS SRTQKGLKNV FDEAIRAVLS
PSARDAREKK KKKQQCLIL