Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL06590 |
Symbol | |
ID | 3254952 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | - |
Start bp | 834445 |
End bp | 836848 |
Gene Length | 2404 bp |
Protein Length | 494 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254136 |
Product | hypothetical protein |
Protein accession | XP_568180 |
Protein GI | 58261540 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.219204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCCATCGGA CATCGGGGAA TACACTTCGG ACACTGCGGA CAATGAGATA CGATAAGGCC CACCAGACAC GCCGAGGATT TCCAAGCAGC GGCTGTACGA TCCCACCGCT CACTAAAAAA AGATGAACGA ATGGTAGATA CGCTATAACG CGTGATAGCG ACATCGATTC TCAAATCCAT ACTACGGCGT ACATCTCTGC CTGCTGTGTG TGATGAACGC TTTGGTTTTG TGTAGTGACT GGTTTCGATG CCGTCAGGTC ACGAGTTTGA TCGAAAGAAA ACGGTATAAT TGTCAATCCG GCATAATAGT GCGTAGCGAC GAGCAATTAC TGTTGTCATC TGCTTTCCTC AAAGAGCCTC GATAGAAAAT GACGGGCGAC TAAAAAGTCT TCATAAGACA AAGAACCACA AACTATCATT CCCAACCTCC CTCCCCTAGT TGATCAAAAC CGACAAACCT GGTCAAAGAT GTCGTACAAG GAAGACAAGG ACCTTGAAGA AGAAGGAGGC GATGCTCCTC AGGCCATCAC CACCCTGATC GAAGAGGTGT ACATCAACAA GTACACTTTC ACCGAAGAAG AAAGCCGATC ACTTGTTCGT AAACTGGACT GGCATATCCT GCCTTACATT TGGTGTACGC AACCTCCTCC CCCCTTTGTC CATCCTTCCG ATTATAACGC TGAAATCTTC ATCTAACGCT GACATCTCCA TCATCCAGGG TGTTACATCT TCAACTCCCT CGATCGATCC AACGTGTCCA ACGCCAAATC CGACGGAATG CCTACCGATC TCAACTTTCC TGACGAAGGT TACGCCATCA TGCTCTCCGT CTTCTATGTC CCCTTCTGTC TCCTTGTCGT ACCCAGCGTA ATGCTCACCA GGAAAATCGG GCCCAAATGG ACGATTCCGG GTTACATGAT CGGGTGGGGT GGGATGGCGA TGGTCAATGC CGGGTGTAAG AATTTTGCTG GAGTGCTTGC TGTCAGACTC TGTAAATTGC TCTCCCTTTG CCCTTGCAGC CGAAAGCAAT GGAAAGAAAA AGGCTGATAC AAAATAGTGC TGGGTGCTTT TGAGGCTGGG TTTGCGGCTT CCCTGATTTT TTACTTGACC ACTTTTTATA CTCGTTCGGA ACTGGGCAAG GTAAGCTGTT TGATTCAACA TGTTATCATC CATTTTCATT TTAATTTTTT TAGCGTATTG CAGTTTTCTA CTCTTGCAAT GCCCTGTCGG GTGCATTCTC AGGGTACGTC ACCCCATCTT TTTCCCTCCA CCTCATGCGC TGACCTAAAA AACGCTCATC TTCTTCTCTA GCCTTATCGC TTATGGAGTC TTCCAAATGG ACTCTAAACT CTGGGGTTGG CAAATCCTCT TCCTTATCGA AGGCGCATTC ACCGTCGCGT TCGCCATCCT TACCGCCTTC ATGCTCCCCT GGTCTCTCGA CGAGGCGCGG TTCCTTGATG AGCGAGAAAG GGAAGTAGGC AGGCTGAGGG TGTTGAAAGA TGGGTCGAGC AAGACGGGAA CAAAGTTCAA CGTGAGAGAG TTTTTCAAAC CGCTAAAGGA TCCGAGGTTC TATGCTTTTG CTAGTATCGG TAAGCCTCTA TTGCTTAGTT CTTCGTGCAT TTGCGATATA TTCTTAACGG ACACGTTTAG CGATCTGCTA CGGTTGCGCC GCCTCCATGG CAGGCAACTT TCTCACCCAA ATCATTGGCC GCTTCAATTA CTCCACCGTC AAGACCAACT TGTTCACCGT CGCCCCTTAC GTCGTCGGTA CCATCTGTCT CCTCCTCACC TCTTGGTCAT CCGACCGGTT CCGTGAACGC GGATTCCATC TTGCTTCCTC TTTTGTCCTC GTCCTGATCG GATGTATCAT CCTCATCGCT ATACCCGTCA GTCAAGTGGG CGCAGGGTAC TTTGCAACAT TCTTGATCAC CGCTGGAGCA TTTACCCCAC CCGTCCTGTT CCATACATGG CACCAATGCA ATGATGCGAG TGAAGACGGT CGAGCGTTCC GCGTCGGGTC CTACAGTAAG TCGTCATTTC CCCCCCTGCC TTGTGGCCAG CCGGCTGATC TGTACGGCTG CTAAGCCTTC CTGGCGAACA CCGGCGGTAT CGTCTCCGCC AACATTTTCC TCGACAAATG GGCACCGGCG TACCGCGAAC CGCTGGCCAT CACCGTCGGT ATTGAGGCCT TGGCACTCGG ACTGGTCATC GCGTTGAGAA TGTGGATGTA CTTGGACAAC AAGAAGCGAA ACAAGGCGCA AGGAGTGAAT TGGCAGTCCA AGGATGTACC TACCGAGGCT CTCGCGGATG GGCTGAAGAA TCCTGTTTTC AGGCATTTCT ACTAAAGTTG TCGGTTTCAA GTACGTTCAA ACAAGTGTTG TCGGATATTA TGCACCTTTT TTTC
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Protein sequence | MSYKEDKDLE EEGGDAPQAI TTLIEEVYIN KYTFTEEESR SLVRKLDWHI LPYIWWCYIF NSLDRSNVSN AKSDGMPTDL NFPDEGYAIM LSVFYVPFCL LVVPSVMLTR KIGPKWTIPG YMIGWGGMAM VNAGCKNFAG VLAVRLLLGA FEAGFAASLI FYLTTFYTRS ELGKRIAVFY SCNALSGAFS GLIAYGVFQM DSKLWGWQIL FLIEGAFTVA FAILTAFMLP WSLDEARFLD EREREVGRLR VLKDGSSKTG TKFNVREFFK PLKDPRFYAF ASIAICYGCA ASMAGNFLTQ IIGRFNYSTV KTNLFTVAPY VVGTICLLLT SWSSDRFRER GFHLASSFVL VLIGCIILIA IPVSQVGAGY FATFLITAGA FTPPVLFHTW HQCNDASEDG RAFRVGSYTF LANTGGIVSA NIFLDKWAPA YREPLAITVG IEALALGLVI ALRMWMYLDN KKRNKAQGVN WQSKDVPTEA LADGLKNPVF RHFY
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