| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL06500 |
|---|
| Symbol | |
|---|
| ID | 3254854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | - |
|---|
| Start bp | 809553 |
|---|
| End bp | 811232 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638254125 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568170 |
|---|
| Protein GI | 58261520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA CCACACTCCT CCGAAAGGCT TCCTTGGTTG GTTACCCCGA CAACACCACC
TATTCCGTAC TGGTCAAGGA TGGCAAGGTC GCTGCTATCC GAGAGACTGG TGCTGGGGAC
ATTGAGAAGG CCGACGAAAC CATTGATATG AGGGAGCTCG ACTCCCACTG GGTTAGCCCT
GTAAGTCTCC AGTAGTCCGA ACAAAGGACC TTCCACTAAC CGCGTTCCCA GAGTTTGATT
GATTGGCACA CACACACCAA GTTGAACGCG TTGCATAATC ATCGTCTCGA TCTGCAAACA
GCCAAGACTG CACAAGAAGT CTTGGACCGA GTAGTTGTTG CCATCAAAGA CCCCAAATAC
GAGCCCAAGT ACGACACCAA CTTTTGCGGT ATCAACTTGC GGAACGCTGA GTGGCCAGAC
CCCGAGAAGC TCACTCGACT TTCTTTGGAC AACATATCTA CTGAGCGACC TATTTTCCTC
TTCTTCAATG GTTACCATTC CATCTGCGCC AACTCTCTCG GTTTGAAATT GGGTGGTTAC
GTGCCCGAGG GTCATAATGG GTATCTTTAT GAGGGAGAAG CTTTCGAGTT GTCACGAGTG
ATTGGGAATG TGGATGTGGA AGCTATCGAC AAGTGGATCA TGGACGAGGC AAAGTACGCT
GCGTGAGTGA CCTCCGTTCA TTAATCCTCT CTCGAGGCTG ATTCCACATA GCACTCTCGG
TGTTACCGAG ATTGTCGACC TGGAATGGGA ACTAAACATC CCCAACTGGC AGCGGCGATA
CAAAAAGGGA TTTAGGACAC TCCGAGTTCA CGTTGGCATG TACACTGAGC ACTTGCCCTA
CTCTATTGAG CGAGGATGGA AATCTGGCGA CGACGTTCCC GAGACCAACG GCCTTATCAA
AGTCGGGCCG TTTAAGATCG TCACCGACGG CTCTCTCGGT TCTCAAACTG CATTCTGCCA
CGAACCTTAC CCCGGCTCTA CCGACAACTA CGGTATGCTC GCATACAAGC CCGAGGCATT
GAGTGAACTG ATCAGAAGGG GCACCGACAA CGGCTTCAAG CTCGCTATTC ACGCTATCGG
TGATCACGCC AATCAGCTCA CCCTTCAAAC CCTCGCCAAG GCTGAGAAGA AAGTACTTCC
AGGCTCTACC ATCGAGCACG CCCAACTGCT CAGCTTTGAA GACCTACCTC TCTTCCGTTC
CCTCAATGTA ATCGCTTCTA TTCAACCTTG TCATCTTGTC GATGACCGAG ACCTCTGCCA
CAAGTTCTGG CCTGGGCGAG AACACCGTGC TTACCCCTTC CGATGGCTTG TGGATGCTGG
TGTCCCTATC AAACTCGGTA GTGACTGCCC TGTCGCCCCT CTCCAGCCTT GGGAAGCTAT
TGCCGTCGCC ATGACTCGAG CTGCTGAGGG CGACGAGCAC AACCCCTTCT GCAAGGAGCA
AATCATTGAT CTTGAAGTCG CTTGGCAGGC GTCCACCTCT GTAAATCATC TCATCTTTAC
ATTTACCCAA AGCATGTACT GACAGTACCT TAGAACGGCA AACCCAAGCT CGAAGTTGGG
GACCGTGCCG ATCTCTGTAT TCTTAGCGCA AACCCTCTCA ACTGCGATGC AGCGGGCATC
AGGGCGATGA AGGTGAAGGG TACCATGTTG GGAGGTGACT GGACTCACAA GGCTTTCTAA
|
|---|
| Protein sequence | MSKTTLLRKA SLVGYPDNTT YSVLVKDGKV AAIRETGAGD IEKADETIDM RELDSHWVSP
SLIDWHTHTK LNALHNHRLD LQTAKTAQEV LDRVVVAIKD PKYEPKYDTN FCGINLRNAE
WPDPEKLTRL SLDNISTERP IFLFFNGYHS ICANSLGLKL GGYVPEGHNG YLYEGEAFEL
SRVIGNVDVE AIDKWIMDEA KYAALIPHST LGVTEIVDLE WELNIPNWQR RYKKGFRTLR
VHVGMYTEHL PYSIERGWKS GDDVPETNGL IKVGPFKIVT DGSLGSQTAF CHEPYPGSTD
NYGMLAYKPE ALSELIRRGT DNGFKLAIHA IGDHANQLTL QTLAKAEKKV LPGSTIEHAQ
LLSFEDLPLF RSLNVIASIQ PCHLVDDRDL CHKFWPGREH RAYPFRWLVD AGVPIKLGSD
CPVAPLQPWE AIAVAMTRAA EGDEHNPFCK EQIIDLEVAW QASTSNGKPK LEVGDRADLC
ILSANPLNCD AAGIRAMKVK GTMLGGDWTH KAF
|
|---|
| |