Gene CNL06170 details

Gene Information

• Locus tag: CNL06170
• ID: 3254736
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: +
• Start bp: 709004
• End bp: 711033
• Gene Length: 2030 bp
• Protein Length: 547 aa
• GC content: 48%
• IMG OID: 638254092
• Product: cytoplasm protein, putative
• Protein accession: XP_568144
• Protein GI: 58261468

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0805149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGTAGCGCA CTCAGGCCTT TCCAAGATGT CATCTACCAA TCAAAAACCT CTATCAGCAT 
TCGTCTCCTT CCCATCGCCA TACACTCAGT CACTCTTGGT TCAAGCGCTG GTCTCCACTC 
TTCCTGCTTT GTCGCTTTCT CTGGTGCAGT TCCCCGAAGA TCAGCCTCCA GCTTTACAAT 
GGCATGTGTA TTGTCCCTTT TAATGTCGGT TATCTGACGG GTTTTGGTCC ATAGGGCCGA 
TTATGACCTC ATGTCATTCG ACATCCCTCA CAAAAGCCCT TCCAAGTATC TCATCTCCTC 
ATACATATAT CGCAAAGCCC TTACCCGAAA ACATCAACTT CACAACACCA TCATCGCATA 
CCTCGCAAAA TGCTCTCACC GAAAGATTCC TTCCATCCTC TCCCCTTTAC CGGAAGGGCC 
TGTTGGAAAT GGGGATGGGA CAGATGTGCT AGGTGGAGGT GCGCCGAAAG GATGGATAGT 
GGATTTGCAA TTCGCGGATG AGCTGGATGA GGCGTTAATG GATGATTTGT ATGAACTTGA 
AGCGGGGATG AGGGAGAATG AGGGGAAAGA AGAGGGAGAG AGGAGATGGT GGATTTTGAA 
GCCTGGATTT GCCGACAGAG CGCAGGGAAT TAGGATGTTT TCCACTGAAG AGGAACTGTG 
AGTGGGAAGG TACGGATGGT TGGATATAGT TTCTGATGAT ATTTGGACGC AGACGAGCAA 
TCTTTGAAGA GTTCGAGCCG TCATCTTCGG ACGAGGAGGA TGACGATGAA GACAAAGAAG 
AAGAAGATGA TGAGCAAGAA AGCGAAGAGG CCCGGCAGAT GGCCAAAGGC GGGGTGGACG 
GAATGATAGA CATGTTAGCG AAAAAGGCTG TCGAGCTTGG CTTCAGCGGA GAAGATGATC 
AAGACTCGAA TGAAAAAGAG GATGAGGATG GAGAGGGAGG TACGGGTGTC ATGACTTCCC 
AGCTGCGACA CTTTGTCATC CAAGTGCGCC GCATTCTTTG GATATTTTAT GTGAATTTGA 
GCTGATGTTT GATATTTGAC ATAGGAATAC ATCCCTAAGC CCATCCTTTT TGACATTTTC 
AATATACCTG AAGAACCATC GTCATCGTTA GAAGGTTACA AAGTAAGCAT CTGAACTAAT 
CGGTTACGCA TTCCTCTTGA TCCCTGATAA ACTTTAGTTC CATCTCCGAG CGTACGTCCT 
CATCACCGGC GCGTATACTG TCCACCTTGC TCGGACCATG CTAGCCCTTT TCTCCGGATC 
ACCTTATACC CCGCCCAAAC CAACGGAAGA TGGCCAGTTG GACCTCAGAC CGCATTTGAC 
CAACACATGT CTCCAGGTGA GCTCCTTAAA TTACCAATTG TAGCCTATTC TTATCATATC 
ACTTAGACGG ATGCGTACGG CGCTCCTACT CCTCCTGAGG AGCTCGTCAA GCTTTTCTGG 
GAACTGGAGG GTATTTCTGC CTTGAACTGT TCATCCTCAC CATCATCCGA TGGCAAGTAT 
TCTTATATAC CACGAGGAGA GGTCACGAAG GAATGGTTGG ACAAAACATT TGCAAAGGTC 
GGAGATGTTG TAGCCGAGAC TGTCAAGGCT GGTGCTGAAT GCGGAAGCTT TGGGTTGCAA 
TTCATGCCCA ATGCCTTTGA GGTGAGTAAC ACAAAGACAT AAATGTTCTA TGAAGGATTG 
AACTGATTCT TTTTCTAGAT CTTTGGTGTC GATCTTATCC TTTCTTTCCC GCCATCATCG 
TCCAAGTCCA CGTCTTTGCC TATACCAACG GTTACTCTTC TCGAATTCAA CGCTTCTCCC 
GACTTCCACC AAAGCGGTGA CCGTCTCCGA TCCGAATTGC TTCATATGTT TAAGGGTGTT 
ATCCGTCTAA GTGTGGCACC GTTTTTCGGT CTTGAGACTG CTGAGGACGA TGAGAAGAAC 
GAAGAAGAGA TGCAACTTGG AGAGGACCGA TGGGGATGGC GACTGGTCGG AAAGGGAGAG 
GTTAGAGGGT CAGAGTGGTA ATATGAGTAG ATCTAGACTT TGGCGGGGCA 

 

Protein sequence

MSSTNQKPLS AFVSFPSPYT QSLLVQALVS TLPALSLSLV QFPEDQPPAL QWADYDLMSF 
DIPHKSPSKY LISSYIYRKA LTRKHQLHNT IIAYLAKCSH RKIPSILSPL PEGPVGNGDG 
TDVLGGGAPK GWIVDLQFAD ELDEALMDDL YELEAGMREN EGKEEGERRW WILKPGFADR 
AQGIRMFSTE EELRAIFEEF EPSSSDEEDD DEDKEEEDDE QESEEARQMA KGGVDGMIDM 
LAKKAVELGF SGEDDQDSNE KEDEDGEGGT GVMTSQLRHF VIQEYIPKPI LFDIFNIPEE 
PSSSLEGYKF HLRAYVLITG AYTVHLARTM LALFSGSPYT PPKPTEDGQL DLRPHLTNTC 
LQTDAYGAPT PPEELVKLFW ELEGISALNC SSSPSSDGKY SYIPRGEVTK EWLDKTFAKV 
GDVVAETVKA GAECGSFGLQ FMPNAFEIFG VDLILSFPPS SSKSTSLPIP TVTLLEFNAS 
PDFHQSGDRL RSELLHMFKG VIRLSVAPFF GLETAEDDEK NEEEMQLGED RWGWRLVGKG 
EVRGSEW