Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL05830 |
Symbol | |
ID | 3254880 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | + |
Start bp | 617985 |
End bp | 621711 |
Gene Length | 3727 bp |
Protein Length | 927 aa |
Translation table | |
GC content | 47% |
IMG OID | 638254059 |
Product | conserved hypothetical protein |
Protein accession | XP_568116 |
Protein GI | 58261412 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00168148 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCTTTCTTC ATACTACTTT ACCTTCCTTT CCCGTACCCT CGCCCGTTCA GGGAGGTTTG TCAATAAAGT CCATTGTTTG GCAGCGGCTT GCAGAGATAC GCAACACAAT GGGAGATCCG GCGTTATCAC AGCTGATCGA TATGGGCATT CCGGTCGGAA GAGCAAGAGC TGCTCTGAAG AGGTCTAAGG GTGACGCCAT GTCTGCTGCT GTAAGTCACG GTGGTCATTC ACATGTCAAT TCCGTACTTT TAGAACATTC TGAAATTCAT CTTGTAGGAA CGAGTATTTG CTGGAGAATT TGATGACATA CCATCGGATG ATGAAGGGGA AGATGGAACG GAAGGAAGCA GCTCCGTCCA AGTTGTCCGT ATCTATCTCA TATAAGCGCC AATAGCTGAA GCTTACTGCC TTAATTGTAG AAGGCGGATC CCGTGGTGAT CGATAACAAT GAAGACGATG CCATGGACGA GGACGAGATG GGACATGAGG ACGAGGAAGA TGATTATGAC GATATGAACG ATGGTAATTT TGACTATGAT GGTTAGTAAT TGATAACAAA GGGCTCCTCA CAAGCTTCAT CTGACAAATC AATACTTAGA GGATATGTCT GATGGCGAAC AAATGGCGTC AGATCCTTAC GCAGGAATAT TCTTCTCAAA GAACCGCGTC GAGGAGATCA TTGAACCGAT TGAGACAGAA GAAACCATGA CCATATCAAT ACCAGGAGGA AGCACGGTCG AGGTGAAGAT CTTAGGTAGA GGAGAATGGA TGAGCGGATG TCCTGAAGGA GGTGAACAGA GCTTCCTTTT CCAGCTCTAT AATACATTGG AAGAAGGCGG AATGCCTTGC TCGGCTGGAT GTGGACATTC ATTTACCCGC AAGAAACAAG ACTTTTTCTG TCTCTTCGTA AATTTCAATC ATATTTCTTT AAATCCGCTC AAGCTGATGA TCGACATAGC CGAAATTCCC GCAATACACC ACATACCTCA ACAGCATCAT CCGCCCTAAT TGCCCCCAAT GTCACCAAAT CACTTGTCTC GCATGTGGTG AGCGAGTCGA CCGTCCTTCC GCTTTACACA GCCAACATTC CAAGGATAAA GCCCCAATGA CTTCGGCTCC TAGCATTCCT TCCGAAACAA CCCAGGAAGC ACTCTTACAC TGTCCAAATC TTCAAGGTGT CATCCTTGGT GTGGGTCTGC ACATGATTGA AAAGACATTT TCTCAGGGAA GAGATCATAA TTCATGCGCA GAGAAGAGCG GAAGGACACC GCCCTCAAAG AAGAGAAAGA CTGATGATAA CCCACCTTTC TTGAAGGGAA AAGGAGCTGT AAAAGGGACT GGCTATGCAG GAAATGTACA AGAAGATGTA AGCGAAAGAT CCCTTCGTTT CAAGATCTCT TCGTTTCGAT GGTTGCTTAT TGTAATTGCA GAGGACGGGC CAGGTTGCAG CTGAAAAAGC CCAGAAAAAG GCGGACCAAA AAGTCGCCAC CATTCTTCAA CAAGTCCAGC ATTTCCTTCC CAACCCTCAT CGCGCTGGTG GGCCAGCAAC ATCCGACTAT CTTGTCCACC CTACTGCCTT AGCGCATTTG AGAAGACGGA GTACATTTAT GAATGATTTG CTGAGAAATG ATAGTTTGTT CGATATGAGC CAACGGGGAG ATATTTATCG GGCGTTGTTC GATTGGCTCG AGGTGAGTCT CATCTCATGA CATGAATGTA TTGGTACTGG GAAAAGGGAA ACGGTCCTGA CTAAAATAGA TTGTTTCAAA CAATGAATCC CTCGCTTCAA TGCTTGGCAT GCCGCAAATG CGTCCCGCCA AATCTGTCCC TTCACCTACC GTCTCCAACT CCCTCATCGT TACCTACGAA GGCGCTCCCT CCCCACGTGA ACTTCTCGAG AATATCGTCC TCCAAGCCAA AGCCGCTTTA AAGGGCCTTG AAGGTATTCA ACCAGCGCAA ATTGAAGGAA TAGCGTTGAC CGAAGAGGAA CTAAGAACAA ATATAAAGGA AATGGAGAAG AAGGAGGCTG AAAGGATTGA AAAAGAGTCG CTAGACGAAA ATAGCGTATT GAAGGCGTTC TGGTGAGTCT CTGTGTATTT GTAGATGCTG CCATGCCAGC CTTACTGAAC AAAGCAGTTT GAGGATCATC AAGAGTGCAG AAATTATCGA CAAGCGACTG GTTGAGACGA AGGGTAAAGC GTTTGTGCAG AGGATGAAAG AGCAACTGCC GCGAATAGAC GAAAGTGGAG TTCAAATTGA GGAGAACCCT GTGGAAAATG GGACCGACGA AGAAATCATT AAGATTTGTA CGCCCTCTCC TCTGCATTCA CAATTCATAC GGCGATGAGA AGCGCTAACA GCTAATAGAT GAGGAATGGG CTACCAGGGC TAGGTTCCAA TACGTTGATC TTCGGGCGGG AAGCGATATT ACGGGTGCGC CGAGCTACAA GCATGCGTAT AGTACTCTTA TCGCTGGTAT CGAGCTCAAT GTACGTCTCA GCATGTTTTC GCCATTCTGT ATATCTCTAA CCTTGGTCAC CGCAAAAATA GAACGCCCCA AAACGATCAC TCGCAATTGC TAAAGAGTTG GCAATACTTA CTACCAGTCT TCCTGTAGCG TGGCACTCGT CCGTCTTTCT GCGGGTAGAC GAAGCCCGTG TAGATGTCCT CAAAGCTATG ATCATAGGCC CAGAAGGGAC ACCATACGAG AACGGTTGTT TGCTTTTCGA CATCTTCTTA CCATTGGAGT ACAATCAACG TTGTCCGCTC GTTAAGTATA TGACGACTAA TGGTGGGAAG TGGAGGTACA ACCCCAATCT CTACGCCGAC GGAGTGAGTC AAACCTCTAA TCACTAAGGT TTGAGTGATA GAAGCTGATG CAAGAATGAT TAGAAAGTAT GCTTGAGTCT GTTGGGGACG TGGCAAGGGC CAGGGTGGAT TGCGGGCCAG TCGACCTTGT TGCAAGTGTT GATCTCGATC CAGAGTCTTA TTCTCTGCGA GGAACCTTAT TTGAACGAGC CAGGTGAGTT CTTGATTTCT TGTTCGCTCA TTACATTCCC TGATGATTGC TTAGGATGGG CAAATATGTC TGGGGTATGC ATCTATGTTA CAGATAGGAC GCCTGAATAC GAAGAGCTGA CGAAAAATGC AGTCTGCACA AAGCAAAGCG TATAATGCCA ATATCCGAAG GATGGTACTC GCTGACGCTA TGGCCAACAA CATCAAGAGC CCCCCGCACC CATGTAAGCC GCATAATCGC TGTCAAAGGT GATGGATGAA ATGGCTAAAG CAGGATGACA CTATAGTTGA GAACGAGATC AAGACCCATT TCCGGCTCAA AGCCAAGGCT ATTCGCCAGC AGATCGAAAA GTACGTCCAT GTTTAGTGAG ACATATAACA TAATGCTTAT ATCGCGTATC ACAGGTGGAG AGAAATGGAC GATAGTAAAG AAGTGGAAGC CGACTATTGG GGTGGAGCTC ATACGTCCGC GGCCTCTGCG CTTTCCAATC GATCATTCGA GGCTGCCGCA AAGGAAGTCT TACGACTGCT GGATGAATTG GAGGGGAAAG TGCAGCCTGT TCCAAAGGCC GAAGAGGAGG CTAGGATTAA GTCCCCGAAG GAGGAAAAGA AGAAGTCCTC TTCTGTGATA TGGAACAAGA TGATTGGTGG TAGCAAAAAG AAGTCGAAGA AAGATGTTTA ATATTGTATA GAATCTTCGG CTTTTCA
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Protein sequence | MGDPALSQLI DMGIPVGRAR AALKRSKGDA MSAAERVFAG EFDDIPSDDE GEDGTEGSSS VQVKADPVVI DNNEDDAMDE DEMGHEDEED DYDDMNDGNF DYDEDMSDGE QMASDPYAGI FFSKNRVEEI IEPIETEETM TISIPGGSTV EVKILGRGEW MSGCPEGGEQ SFLFQLYNTL EEGGMPCSAG CGHSFTRKKQ DFFCLFPKFP QYTTYLNSII RPNCPQCHQI TCLACGERVD RPSALHSQHS KDKAPMTSAP SIPSETTQEA LLHCPNLQGV ILGVGLHMIE KTFSQGRDHN SCAEKSGRTP PSKKRKTDDN PPFLKGKGAV KGTGYAGNVQ EDRTGQVAAE KAQKKADQKV ATILQQVQHF LPNPHRAGGP ATSDYLVHPT ALAHLRRRST FMNDLLRNDS LFDMSQRGDI YRALFDWLEI VSNNESLASM LGMPQMRPAK SVPSPTVSNS LIVTYEGAPS PRELLENIVL QAKAALKGLE GIQPAQIEGI ALTEEELRTN IKEMEKKEAE RIEKESLDEN SVLKAFCLTE QSSLRIIKSA EIIDKRLVET KGKAFVQRMK EQLPRIDESG VQIEENPVEN GTDEEIIKIY EEWATRARFQ YVDLRAGSDI TGAPSYKHAY STLIAGIELN NAPKRSLAIA KELAILTTSL PVAWHSSVFL RVDEARVDVL KAMIIGPEGT PYENGCLLFD IFLPLEYNQR CPLVKYMTTN GGKWRYNPNL YADGKVCLSL LGTWQGPGWI AGQSTLLQVL ISIQSLILCE EPYLNEPGWA NMSGSAQSKA YNANIRRMVL ADAMANNIKS PPHPFENEIK THFRLKAKAI RQQIEKWREM DDSKEVEADY WGGAHTSAAS ALSNRSFEAA AKEVLRLLDE LEGKVQPVPK AEEEARIKSP KEEKKKSSSV IWNKMIGGSK KKSKKDV
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