| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL05160 |
|---|
| Symbol | |
|---|
| ID | 3254877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | + |
|---|
| Start bp | 445817 |
|---|
| End bp | 448246 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638253990 |
|---|
| Product | Eukaryotic translation initiation factor 3 subunit 6, putative |
|---|
| Protein accession | XP_568056 |
|---|
| Protein GI | 58261292 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTTCAAAACC AAAAATGGCC GACCCCAGCG CTTTCTACGA ACCCGAAGAG GATGAACTCC
TCTCTCAGCT CGCTATCCCC GTCCAGAACT ATCAGCCCCT TTCCGAAGGC GATGAATACA
GGCGCCTCCA GCAACTCGAG CAGCATGCTT ACGCCCAGCA GACCGCCATG GCCCAGGAGC
AAGAGATGGA GCAACTCGCC GTTTTGGAGC TCATCCCGGA GGATGTGAAG AGGTTCTTGG
TCATGTTCCA CCAGGCCATT TTGGAGAACG ATTTGCCCAC CATCACCAGC ATGTATGAGT
CTGGATGGAA CAAACTCACT CAGGTGAATT GACTCTTTAC AAGTGAAAGA GTGGGAGTGG
ATGAGGACGG GAACTGATAT TGGAGTAGGC CCATTACCTT AACAACGAAT GGCCCGAGGC
TGAGCTCATC GCTCCTCTTG TTGGCAACGG TAAATCATCA TCTTTTGTGT GCTGCTCGGC
GGTTTTGTCT GGTAACTTGG ATGGCGCGTT TGAATAATGT TCGAATGGGT CAGATGAAGC
GGGAAATTGA ACCTGTTGCG AGATGAAGGG ATAAATCTTT TGGCCACAAG TTACCAGACG
CCGCCGGACA GACATCATTC CCGTAGAATA TGGAAGCTGA CAGTATTATA GACCAGGTAT
TCTTGACCCT TTATCGAGAG CTTTACTTCC GACACGTCTA CGCCAGGCTT CAGCCTACCA
TTGACGACCG ATTCCAATCC TACGAAAACA TTTGCGAGCT TTTCAACTAC CTCCTTAGTG
CGTCAATCGT CCTCTTTTCA TCCACACGAT CTAACACATT TGTAGACTCT GAAGGTCCCG
TTCCCCTCGA CCTGCCTATC CAGTGGCTTT GGGACATGCT CGACGAGTTT GTCTACCAAT
TCACCTCTTT CTCTCACTGG CGATCTTCTC CCAAGGCCAA GACGGAGGAG GAACTCGAGA
TGCTCGCCGA ATCACCAAAT ATCTGGTCCT CCTACTCTGT CTTGAACGTC CTCTATTCTC
TTGTCCAAAA ATCTCAAATT AACGAACAGC TCAAGGCTGA GAGGGCGGGC AAGTCTGTTG
AGGAAGTTAC CGAAGTTGCT GGAGAGTACG GAAGCAAGCC CCTTTACAAG AACTTGGGTT
ACTTCTCTCT GATTTGCTTG TTGCACGTTC ATGTGTTGTT GGGTGACCCT ACGTGTGAGT
GTGACTGCTG CAGGTGTAGA TCTTCTTGTT AACCATATTA TAGTGGCTTT GCAGACCATG
GAGAATGTTG ACCTTGGTAA TGCCGCTTTC CTTACCAGGA TCACTGCTTG CCATGTTACC
ACTTACTACC ACGTTGGATG TGCCTACATG GCTCTCGGAC GTTGGCCTGA CGCTATTAAG
ACCTTCGTCT CTGTTCTCAT CTTCTTCATC CGTATGAAGC AATACCACAC CAGATCTTAC
CAATACGGCT CTGTAAGTTA TCGTCATCTG CTGTTAAAGC AGTAGCAGAG CAAAGACTGA
CGATGTTTCA GATCGCCAAG ACTTGCGAGC GAATGTACGC CCTCCTCGCC ATCTGCACCA
CCCTTTCCCC CGGTCCCTCC GATGAAAACA TCATGACCAT TGTCAAGGAG CACTACGGTG
ACCAACTTGC TATCCTCCAA CGTGGCGGCC CCGAGGCTCT TGAGGCCTTC AAGGATCTCT
ACCTCCAAGC CTGCCCTAAA TACCTCAATG TTAACCCTCC TCCTTATGAA GATGCTTCTG
CTCTCGAGGC CTGGCTGGCC AACCCCCCTG CGGACGCTAC CCAGAGGCAT CTCGAGTTGT
TCCTGAGCGA TGTTCAGGCT GTTCAGGGTG TTAACGGCAT GAGGAACTTG TTGAAGCTTT
ACACTTCAAT TGATGCAGCC AAGCTTGCGG CGTTCTCGGT GTCTGGAGAG GAGGAAGGCG
AGGAAGAAGT GTTGCAACAA TTGATGGTGC TCAAGAGTGC CAGCAGTACT TATGGACGAG
GACAGGCCGA GACAACATTG TTGGACGGTG AGCGGAAAGT GACCAACAAC TTGGATTTCA
CTATCGACGG AGTAAGTCCA TATCATGTCC AGGGCTGTCA TGTTTTATTA ACTTCTTGAC
AGACCATGGT CCACGTTGAG GAGACCACAT CCCACCGAAG ATATGCTGGC TTCTTCATCC
GAAATGCCGA GCACGCTCAA CGTGCGCTTA CATCTATCAA ATCTGCCCCT TTGCCCGTTC
GTAAACCCGC TTCATCTTCC GCCCCCGCTC CCGCTACCAC CGCTGCGCCT ATAAGCAAGT
CTGGCGAATC AGCAGCTCCT GCACCTGCAG AGGCTCCCGC GGCTCCGGAA AAGAAGGCTG
GTACTTGGGT GCCAAAGTCT AGACAAGCGA GGATTGCGGC CTAAGGGAGA TGAGGAGTTG
TGATAGAGAT ATCAGGGCTT GGGTGTAGTG
|
|---|
| Protein sequence | MADPSAFYEP EEDELLSQLA IPVQNYQPLS EGDEYRRLQQ LEQHAYAQQT AMAQEQEMEQ
LAVLELIPED VKRFLVMFHQ AILENDLPTI TSMYESGWNK LTQAHYLNNE WPEAELIAPL
VGNDQVFLTL YRELYFRHVY ARLQPTIDDR FQSYENICEL FNYLLNSEGP VPLDLPIQWL
WDMLDEFVYQ FTSFSHWRSS PKAKTEEELE MLAESPNIWS SYSVLNVLYS LVQKSQINEQ
LKAERAGKSV EEVTEVAGEY GSKPLYKNLG YFSLICLLHV HVLLGDPTLA LQTMENVDLG
NAAFLTRITA CHVTTYYHVG CAYMALGRWP DAIKTFVSVL IFFIRMKQYH TRSYQYGSIA
KTCERMYALL AICTTLSPGP SDENIMTIVK EHYGDQLAIL QRGGPEALEA FKDLYLQACP
KYLNVNPPPY EDASALEAWL ANPPADATQR HLELFLSDVQ AVQGVNGMRN LLKLYTSIDA
AKLAAFSVSG EEEGEEEVLQ QLMVLKSASS TYGRGQAETT LLDGERKVTN NLDFTIDGTM
VHVEETTSHR RYAGFFIRNA EHAQRALTSI KSAPLPVRKP ASSSAPAPAT TAAPISKSGE
SAAPAPAEAP AAPEKKAGTW VPKSRQARIA A
|
|---|
| |