Gene CNL05050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL05050 
Symbol 
ID3254968 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand
Start bp417613 
End bp419997 
Gene Length2385 bp 
Protein Length456 aa 
Translation table 
GC content47% 
IMG OID638253978 
Productconserved hypothetical protein 
Protein accessionXP_568047 
Protein GI58261274 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTTGAAAC ATACAAATCA CTTCTCCTCA CGTTAAACAT CTCATTATAT ACTCCTTGTT 
GCTCTCTACA TCCATATTCC AGCAAGTTAT TCTTACAGCC ATCATGACCT ATACTGAAAA
CACCAACGTC GTCATCGTCG GAGCCGGTAA GCTCTATGTA TCACCGCGGT CGGAGAAAAA
GCGATGTGCT CACAATGCTG GACAGGTATC TTTGGTATGT CCACTGCTTT GTGGATGCTT
GAAACCGGAA AATACTCTGT CACCCTCTTG GACAAATCTG AGGTTTTGCC TGCTCCTGAC
GCTGCTAGTA CGGGTGAGCC ATGTCTGGTT TACGAATTCC ACAGAAAACA GGAAAAGACT
AACGGTTTGC TTCTAGATAT CAACAAGGTC CTTTCCGCTT CTATGGATTT AAAAAAAAAG
AAAGAAACTG ACAGGAAAGG TCTAGATCAT TCGAGCTGCT GACTACAAGG ACCCTCTTAT
TGCCGCTCTT GCTCTCGATG CCGTCGAGCA CTGGCGCAAG CCTGAGTGGG AAGGCACGTA
CCACGAGTGA GTGATTTCTT GGCACATAAA AATCAAAGCT AATGTGTTAA TGGCAGATGT
GGAGTCGTCG CTCTTTCTGC TACCCATGAG AAGGAGGGTA TGGAGTTTAT AGACTGTGCG
TACAAGAACT GTCGCGACCT TGGCCTCGAC GTTACCCTTC TTCCCGATGC GACTGCTATC
AAGCCTGTCG TTGACCGTAA TAATGCCTTT CCCACTGGCT CTTTCGGCGG CAGGCAAGGT
TATATTAACC CCATCGGTGG TTGGGGTGAG GCTGGTAGGG CTGTTGAGGT TGGTCTCACG
AGGGCAAAAA AGCTCGGTGC TATTGTTAGA GCTGGTTCCG AGGTTATTGG TTTGATCAAG
GACGGCAAGA ACGTCAAGGG AGTCGAGTTA AAGAGCGGTG AGAAGATTTT CTGTGACTTA
GTTGTTGTGA GTGGCATTCC CATTGCGCCA AAGCGGTATT CTAGCTGACC TTGATATTTT
GAAGGTCGCC GCGGGTGCTT GGACTCCTAA GCTTTTTGCT TCTCCTGCCT TTGCTGCTCG
TCTCCCGCCT ATCGTGGCTA CCGGGTGTGC TACTATTTCA TCAACTGCCA TTTATCAGGA
TAGATACTGA ATTAATCGTT GCTAGCCAAA GTGTTGCTAT CCTGCAGCTT ACTCCCGAAG
AGTCTAAGAA ATACGCCAAG GTCCCCGTTG TATGTCATTG CTCGCACTTC GCTAGTCATA
GAATCTCCAC TAATGCGTAC AATTCGCTAG GTCTTCAACC TCGATGATGG ATGGTACATC
TTCCCACCCA ACCCCACTGG CCTCATGAAG ATGGCTATTC ACAGCGCTGG TTACATCAAC
CCTGTCGAGG AGATTAACAA CGTTTCCGTC CCTCGAACCA AGCTTACTCC CGGTGCCGAG
GATGGTGCTA TTCCAAAGGT CATGTTACAG GCCTTGAGAA AAGGTTTGTC TGAGGTTTAT
CCTGATTTGG CCAAGAAGGA TTATGCTATG ACCCGATTGT GTTGGTGAGT CACTTTGGTA
TTTGCTGATG GTTTTAGGCA TGTTGCCTGA CAAAAGAACC AGGTACTGTG ACACTGTTAC
CGGTGACTGG CTCATCGACT ACCACCCTGA TTACAATAAC CTCTTCCTTG CTACTGGTGG
ATCCGGTCAC GCCTTCAAGT TTGCCAGCAA CATCGGTCGC GAAATCCTCA GACTCATCGA
GCGTGACTCT TCATCTGAGT TCAAGGTTCG ATTCTCTTTC AACCCTCCCA AGGAGATGGT
TGAGCCTCCT TCCGAAAAGG GCGACGTTTC TGCTGAACGC ACTCAGGTTA CCGACACTGG
TGCCGACGTG CGATCTGGTA TGAGAAAGCT CTTGGTGATC GACGAATTGA TCCGGCCCGA
AGATTTGAAA GCTTATTAAT CAGTATGTGA AGTCAAGTAA AAGTGAATCT TGTATTTTGG
GCCTGTATGT ATTGGTGATT ATCATGTTTG TCTTGCTTTT ACGTCGGCTG AGAAATTTAA
AGATCATTAA CTTTGTGCTT GACATTGGTG TCGACTTGCG CTGACGATTC TGAGAGTAGG
TATTTCTGCA ACATGAATGG CTCCTGTTTC CTTGACAAAT GACAGCAGAA GTCTAGCTGT
CTTAAGACTT TCCAAACTTT CATCTTTCGG GGACCGCATA CATATCATCG ACAACGAAGT
AGAGCTAACT AAAAAAGACA ACCACATAAG TATCGTTATC GCTGCCTACG TACAACCATT
CATCCGAGAA ACCCAACTAC TTTCCATTAC AACCTGGAAT CTATTTTAGC GCCTGCGGGA
AATTGGGATA ATCAGGATGG TAACTTGCAG TTGACTCAAT TGGGA
 
Protein sequence
MTYTENTNVV IVGAGIFGMS TALWMLETGK YSVTLLDKSE VLPAPDAAST GEPCLIIRAA 
DYKDPLIAAL ALDAVEHWRK PEWEGTYHEC GVVALSATHE KEGMEFIDCA YKNCRDLGLD
VTLLPDATAI KPVVDRNNAF PTGSFGGRQG YINPIGGWGE AGRAVEVGLT RAKKLGAIVR
AGSEVIGLIK DGKNVKGVEL KSGEKIFCDL VVVAAGAWTP KLFASPAFAA RLPPIVATGQ
SVAILQLTPE ESKKYAKVPV VFNLDDGWYI FPPNPTGLMK MAIHSAGYIN PVEEINNVSV
PRTKLTPGAE DGAIPKVMLQ ALRKGLSEVY PDLAKKDYAM TRLCWYCDTV TGDWLIDYHP
DYNNLFLATG GSGHAFKFAS NIGREILRLI ERDSSSEFKV RFSFNPPKEM VEPPSEKGDV
SAERTQVTDT GADVRSGMRK LLVIDELIRP EDLKAY