Gene CNL04880 details

Gene Information

• Locus tag: CNL04880
• ID: 3254816
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: -
• Start bp: 371907
• End bp: 373906
• Gene Length: 2000 bp
• Protein Length: 452 aa
• GC content: 48%
• IMG OID: 638253960
• Product: ornithine-oxo-acid transaminase, putative
• Protein accession: XP_568030
• Protein GI: 58261240
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR01885] ornithine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0178177
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCTTTGTAT CGTCTACTTA CTATAATACC AAACAATGTC CCCAATCGCT TCCACCGCTT 
CTCCCATCCC GTCAAGCAAG CCCACCCTCT CTAGCCAGGA GGTCATGAAC CTCGAGCACG 
AGTACTCGGC GTCAGTGTAT TCGCGTATCT GACAGAAACT TGTACTGACG CGTTTTGCAG 
TCACAACTAC CACCCTCTTC CTATGTACGT TACCGGAAGC AGAGCTGTTA GTAAAGTCTC 
TGATATCGGC CATCCATAGC TGCTTCGAGA AGGGCCTTGG TGCCCATGTC TGGGACCCCG 
AGGGAAATGA GTACCTCGAC TTCCTTTCAG CCTACTCGTG AGTGGATGCT CTTTTGTGGA 
GTCTTGTGGA AGTAGGGATT GTTGATAGCT GTTATCAGAG CGGTTAACCA GGGCCACTGC 
CATCCCGAAA TTTGTAGGTT GACATACTGA ATCGCCGTCG ATCATCCCAA GCTCATCTGC 
CTTGCAGTGA ACACCCTTGT CACCCAAGCC TCCAAGCTCA CCCTTTCTTC CCGAGCTTTC 
TACTCCTCCA ACCTTGGTCC CTTTGCTAAG AAAATTACCT CCATGTTCGG TTACGACATG 
GTTCTCCCTA TGAACACTGG TGCTGAGGCC GTTGAGACTG CTATCAAGCT CGCCCGTAAA 
TGGGGTTACG AGAAGAAGAA GATTCCCGAC GGCAAGGCCA AGGTTCTTTC TGTCGAGGGG 
AACTTCCACG GAAGGACTAT TGGTATCATC TCTATGTCTA CCGATCCGGA ATCTAGAACT 
GGTTTTGGTC CTTTCTTGGA AAATGTAGGC CCTAGATGGG ACACAGGGTT GATCAGGTAC 
AACCACACCG AGGATTTGGA AAAGGTGCTC GAGAAGCACG GCGACGAAGT TGCTGCCTTT 
TTGGTTGAGC CCATTCAGGG TGAGGCTGGG TAAGTCTCAT TTGTCCTTAT AATTTTTTTT 
AATAAAAAAA AGAAGCGACT GACCCATTGA CAGTATCTTC GTTCCAGACG ATGGTTACCT 
TGCCAAGTGC GCTGAGATCT GCAAGAAATA CAACGTTCTT TTGATTTGTG ACGAGATCCA 
GACTGGTCTT TGCCGAACCG GTAAGATGCT CTGCTACGAA TGGGACAACA TCAGGCCCGA 
CATGGTCATT CTCGGCAAAG CCCTTTCTGG TGGTAGTACG TATCGGCAGT GTCTTCGATC 
CATCGATCAT CTGCTGATCT ATCAATGTAG TGTACCCCGT CTCTTGTGTC CTCGCCGACA 
AGGATATTAT GCTTTGCATT AAGCCTGGAG AGCACGGTTC TACCTACGGC GGTAACCCTC 
TTGGTTGCGC TGTTGCCATG ACTGCCCTCG ACGTTCTTGT CAAGGAGGAC CTCGCCAACC 
GATCCCTCAA GCTCGGTGAA ATCTTCCGAT CTGAACTCGC CAAGCTCAAC TCTCCCTTCA 
TCAAACTTAT TCGTGGACGA GGATTGTTCA ACGGTGTGGT TATTGACGAA ACTGCGAGCA 
AGAAGGGAAG GACCGCTTGG CAGCTTTGTT TGTTGATGAA GAGCAAGGGC TTGTTGGCCA 
AGCCTACTCA TGTCAACATG TACGTTTTAT CTCTTTTGGC ATGATGACAA GTCTGCTAAT 
TAAGAGATGT AGTATCCGAT TTGCTCCCCC ACTCGTGATC AGCGAGGAGG ATGTCCGCAA 
AGCCGTCAAA ATCATCGGCG AGTCCCTTGA GGAGCTCGAC ACCGTAAGTC ATTTCATGTT 
TCTGTAATGC AAGGACGTAC TCTGATTTCT ACGACGAAGA TTGAGAAAAT TCCCGGCGAT 
GAGGGTGAGG AGCACAAGGC TGCTATCAAG CTTGACGATT AAGCCACCTA CCGGTTTATG 
AGGTGATGTA ATAGTAAAAG GTCTGCGAGA AGCGGAATTT TGTCAAGAAT TTAGCACAAA 
TATATAGCAT TTTACGAATT CCCAAAAAGT CAAAAACAAC AAAACGATTG TTGAATGTGT 
TTGTCACTGT TTTATCTATG 

 

Protein sequence

MSPIASTASP IPSSKPTLSS QEVMNLEHEY SAHNYHPLPI CFEKGLGAHV WDPEGNEYLD 
FLSAYSAVNQ GHCHPEILNT LVTQASKLTL SSRAFYSSNL GPFAKKITSM FGYDMVLPMN 
TGAEAVETAI KLARKWGYEK KKIPDGKAKV LSVEGNFHGR TIGIISMSTD PESRTGFGPF 
LENVGPRWDT GLIRYNHTED LEKVLEKHGD EVAAFLVEPI QGEAGIFVPD DGYLAKCAEI 
CKKYNVLLIC DEIQTGLCRT GKMLCYEWDN IRPDMVILGK ALSGGMYPVS CVLADKDIML 
CIKPGEHGST YGGNPLGCAV AMTALDVLVK EDLANRSLKL GEIFRSELAK LNSPFIKLIR 
GRGLFNGVVI DETASKKGRT AWQLCLLMKS KGLLAKPTHV NIIRFAPPLV ISEEDVRKAV 
KIIGESLEEL DTIEKIPGDE GEEHKAAIKL DD