Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL04840 |
Symbol | |
ID | 3254767 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | + |
Start bp | 358136 |
End bp | 362069 |
Gene Length | 3934 bp |
Protein Length | 827 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253956 |
Product | exo-beta-1,3-glucanase |
Protein accession | XP_568025 |
Protein GI | 58261230 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.226873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTGCCATT ATAATTTCCT TAGGTGGTTT TGATATCAAG AAGCATACAC GGACACTCCA CCTTTTAGTG AAAGTAGCGA TCATTGCGTT ATAGTTTCGT TCATTAGCAA CTGCTGAGGA ACATCATCGT ATCGCACATT GGTTCACTGG TCCGCAAAGC TTTCCGCTGC TGGTGCGATA TATAGAAGAA TTCCGCTCTG TAAGTGCACA GATTTCCAAT CTGCATATAT ACCGTCTGCA CTGCTTCGTC GAGTCCTTTC AGAACTCAAA ACGAGCCCTG TGTGCCTTGC TTCCCGTCCT TCGTAGGCTT TGCTGACAGT GTGTTTAGTG GTACAGTAGT AGAGTGGCAT CCCTTTACTC TCGGAAACAC TCTTTTCCCC GTTTTCCAGG AAGAATTGTG AAAGGTCAGT GTGTCGCCTT GTTCGCTTGC TCAAAGAAGG AAACAATGCC GTGTGCACGG ATATGTGCCG TTGTCTTCTT TCCGGGCCCC GAATATAAAT TGCGTTTCCC CCGCTAACAT TTTTCTATAG CCACTTTTTT TCACAATGCC GCGCCCATCT TATGACCCAG TGGCGAACCC AAACTTCTCC CCGGATTCCA ATATCTCTCC CGATCCCAAC CGTAACTCCA GCTTTCTCGA CCCAGAAGCG AACAACCTTT TTGGGAGGCC CGGGTCCGAA TATGCCCCAG CACCATCGCT CATGAGCCGT GACTCAACAG CAGCAAGCAT GAATCTTGCC GGGGGGACAC CATCTCTGGC TGGCACACAT AGGGATAGCT GGGGCAGTGG AGTAGGGCTG ACTGGTGCTG AAGGAGCTAC CAATGTGAGT TTTTCTTCTC GCTCCTTCCC CGCATCTGGT GCTTGAAAAA CTCGATCACT CTGTGTGAAA GCTTTCGTCG CCTCAAGATC ACTGACTTTT GTTTGCTATC AGGGCAACCG TAACCCAGGT CGATCTGGCC TTGCTCATTC AACTGTTGCT TATGAAAGCG GCGATCGATT ATCCACCAGC GAGGAGGACG ACGAGCAGGG CCACATCACA CCCGCGGTGG CAGCCATTGG AGCGGGAACA GCAGCACGAG GATTCAGTGA AAAGCCAAGA TGGGCAGACC ACGAATCTGG CCAGGGAAAG AAGAACAGGA AGTGGCTGTG GGCGGCTTTG GCAGCTTTGC TGATTGTTGC TATCGGCCTC GGTGTTGGCC TTGGTGTCGG GTAGGTCAAA GTCCTGAGGA AAAAGCGAGT GTTACTGATA AGTTTCAGTC TCACCCGAAA CAAGGACAGC AAAAGCCTCG TTGCTTCCGC TGGTAATGAA AATTCTTCAT CCCAGGCTCC GTCGGGCACA TCTTCCGTAT CGGGATCAAC GACAGCTACA TCAACTAGCG CCACTGCTTC TGCTACTCCC ACTACCGGCA CTCAAGGCTC CCTCATCACT TTGGAAGACG GTTCCACGAT GACTTATGAC AATCCCTACG GCGGTAAGTG GGTATGGGAC GAGGCCAACC CGTTCAACGT GAGTTCACCG TGAGACTATT TAATTTTGCA TGAACTAACT CTACTCGAAA ATCGTAGAAC GAAGCCCAAG CCAACTCTTG GACCCCGGCA CTGAATCAAA ACTGGACATG GGGTCAAGAT AAAGTCTTTG GTGTTAACCT CGGTGGTTGG CTTGTTACTG GTGAGCGATA GCCGCTTTCC GCAAGAATTA ACTAAAATAC TTGACAGAGC CCTTCATCGT CCCCGGCCTT TACGAAAAGT ATGCCAACGG CTCTGCCGGC ACTGCTATCG ACGAATACAC CCTTTCTATC AACATGGGTG ACAACCTTAC TGATGCCCTC ACGGAACATT ACGAGACATT CATTACCGAG GCAAGTGGTA GATTGATCAA CGAGATTGGA CACTAACTTG TTTCACAGCG TGACTTTGTC GAAATTGTCG CTGCGGGCCT CAACTGGGTG CGAATCCCTA TTCCCTTCTT TGCTATCGAG GTCTGGGAGG GCGAGCCTTT TCTACCCAAG GTTTCATGGG AATACTTTTT GAAAGCTATC AAATGGGCCA GGAAGTATGG ATTGAGGATT AACCTTGACC TTCACTCTGT TCCCGGTTCT CAAAGTAGGC CTCGTTCTTC GCTCGTGAAG TCTTCGCTGA CAGTCTTATA GACGGCTGGA ACCACTCTGG CCGCCAAGGA TCCGTCAACT GGCTGAACGG TGTCATGGGC CTTGCTAACG CTCAACGATC CCTCGACTAC GTCCGTACGC TCGCACAATT CATTGCTCAG CCCGAGTACG CTCCTGTCAT CCAGATGTTT GGATTCCTCA ATGAACCCAA CGGCAATGCT ATCAGCAAAG GCCCCGTCGC CTCCTTTTAC ATTGAGGCCC ACAACATTAT TCGCGACATT ACTGGTATCG GCGCCGGCAA CGGTCCAATG CTCTCCATGC ACGATGGATT TTTGGGAGTT GCTGCGTGGT ACGGCGATCT TGCTGGTGCT GACCGTATGA TGCTCGACCA ACACACCTAC ATGGTCTTCC AGGACCAGCC TCAGGGTACT CTTGACACTC TTAAAACGAT GCCATGCCAA TGGTGGGCTT CGTCCACCAA CACCACCTCC CAGCAGTGGG GTCCCAATAC CGCTGGTGAA TGGTCTGCGG CCTGGAACGA TTGCGGTAAA TGGGTGAACA ATGTTGGAAG TGGATCGAGA TACGATGGAA CTTATGATGG TTATGCGGAC AAGGTGACCG GCAGCTGTGA TTACTGGAAC GACTATACCC AATGGAACGC GAGTACCATC GAGGCGTTGA ACCACTTTGT CTCTGGTAGT ATGGATGCTT TGCAGGTCAG TCTGCGCATT TGATATCGAA AACCAGAGTA AAACTAATAA AATTGGCGAT ACAGAACTTT TTCTTCTGGA CTTGGAAGAT TGGAAACAGT ACCGACGCTA TTCAGCAGCC CAACCCATTC TGGCACTACC GTCTCGGTCT CGAGAAGGGA TGGATTCCCA AAGGTAGGTA TCCGTCTTGA TGGGTTGGAA AAATGGCTGA TAATTATGGT TTAGACCCTC GAACGGTTGC TGGTACCTGC CAGGCAGACG GCGTATCGAT GAACAACTTT GACGGAACGT TCTCCAATGC CTACGTGACT GGTGGTGTGA GTTGCATCTT TGGAATGGGC CGATATGGGA CAAGCTGACA ATATTCTCAG GCCGGTGCTG GTACCATTGC GGCGTCCGCG TCCTCTTCCT ACCCCTGGCC GCCTGCTTCG TTCACCAACG TCGCCTCGGA CTCCATATCT CTCCTCCCTC AATATACCCA GACGGGTACT CCTATTACCA TGCCCGGACC TACATTTACC TCTCCCGGGT CTACTGCGAC CATCAGCGCG GGTAGCGGAT GGTATAACGC GAATGCGAAT GATAGGCAGG CATATGCCGC TATCAGCGGG TGTAGCTATC CTGCAGAGTA TTCTGCGGCC GATTTGGCTA TTCCGACGGG TGCATGTGGT GCGGGGTTGA GCCAGGCGAA CAAGAGGTCT GCTCAGCCTA CTCCTGCTCC TACACGATGA TAGGGGCGTA GTAGTTGACT GGTTTGTGCA AGGACAATGA TGGCTGCATT GTTCGGCCTT GGCTGTGTTG AACAATGGAC GATCGGGGGT TGGTGAACTT TGGTTATCTC TCCTTTACAG TACATGCTTC ATTTTTTATC AACATTATAT TCGCCCATTT ATCAATTTTC CGCATATTAT TTATCTGTAT TGTGTAATTC CTTCTTCATG GACGATAGTT TGATTATTAT ATTTGATTGG TTTTGATAAA TATGTAACGT GTATCTATAA TGATCATCAG TAGGTTTAGA GTATACTTGC CCTATCCAGA TTGAAATTTC AGTTTTATAG ATTGTACCAG CAGAGAGTCA CGTTTTTTAC ACTTGGCAAT GAGAATGGTT CTTT
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Protein sequence | MPRPSYDPVA NPNFSPDSNI SPDPNRNSSF LDPEANNLFG RPGSEYAPAP SLMSRDSTAA SMNLAGGTPS LAGTHRDSWG SGVGLTGAEG ATNGNRNPGR SGLAHSTVAY ESGDRLSTSE EDDEQGHITP AVAAIGAGTA ARGFSEKPRW ADHESGQGKK NRKWLWAALA ALLIVAIGLG VGLGVGLTRN KDSKSLVASA GNENSSSQAP SGTSSVSGST TATSTSATAS ATPTTGTQGS LITLEDGSTM TYDNPYGGKW VWDEANPFNN EAQANSWTPA LNQNWTWGQD KVFGVNLGGW LVTEPFIVPG LYEKYANGSA GTAIDEYTLS INMGDNLTDA LTEHYETFIT ERDFVEIVAA GLNWVRIPIP FFAIEVWEGE PFLPKVSWEY FLKAIKWARK YGLRINLDLH SVPGSQNGWN HSGRQGSVNW LNGVMGLANA QRSLDYVRTL AQFIAQPEYA PVIQMFGFLN EPNGNAISKG PVASFYIEAH NIIRDITGIG AGNGPMLSMH DGFLGVAAWY GDLAGADRMM LDQHTYMVFQ DQPQGTLDTL KTMPCQWWAS STNTTSQQWG PNTAGEWSAA WNDCGKWVNN VGSGSRYDGT YDGYADKVTG SCDYWNDYTQ WNASTIEALN HFVSGSMDAL QNFFFWTWKI GNSTDAIQQP NPFWHYRLGL EKGWIPKDPR TVAGTCQADG VSMNNFDGTF SNAYVTGGAG AGTIAASASS SYPWPPASFT NVASDSISLL PQYTQTGTPI TMPGPTFTSP GSTATISAGS GWYNANANDR QAYAAISGCS YPAEYSAADL AIPTGACGAG LSQANKRSAQ PTPAPTR
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