| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04830 |
|---|
| Symbol | |
|---|
| ID | 3254807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | + |
|---|
| Start bp | 352509 |
|---|
| End bp | 355337 |
|---|
| Gene Length | 2829 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638253954 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568024 |
|---|
| Protein GI | 58261228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00803] UDP-galactose transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.269217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTC ACATCGTTCA CATCGTCCAA ACACCCACAT ATCAATACAT ATTTGAGCAA
GTGAGCCATT CCTGTAGCTG TATTTATTCT CCGCTCTGTG GACCGAGCCT CGCCCAAGTC
ACCCTTTCCA CCCACGCCGT ACAGCCTGCA CGCGGCCAGC CACATCCAAT TTCATCTCCA
CTTTCATCTC TCGATTCTTC TTCACTCCTA CCAGTCTCCA TAAACAACCT CTCCGCACGC
AGAACCGACT TGCCGGTATT TTAATTTTTC ACAGTCAACA TTCACTGGTT TGGGAAGACA
GCCGCGCACA AATATATACC GCTTTTCCAC ATAACCGACC TTGACGGTAG TCAATAACGG
CAACTTCCTG TAGTCTTGGA TTCCCTGGTA TGGCCCATCG AACCAACACT CGATCTCCAT
CGGGGTTGAA TCGCCGCCCG ACGGACCGAT GTACGTCCCA GTCTGGGTCC CTTCAAACCG
CATCCTCGCC CGTGCAATCG ACATTTGGAG GGAGGATATA TGCTGCTCCG GAGGAGGACC
GAGGGTTAAT AATGAGAGAT CGAAGCGAGA GAGATCGGGG AGAGAACGAC TGGGCTGACG
AGAAGGGGAA CAGCATGGGG AAGACGCGCG GTATGGATGT GGGAGTAACC CGGCCTAAAA
GGAGGCTAAG CAGGTAAGCC ATCCTCCCTC CGCCCTTCCC ATATGTCCAA GTGCGATCTG
TGCGCTGGGC TAGGAATGTT TTGAGCGGGT CCTTTTGGCC CTGGCTCTGA GGCATTTCCC
CTTCCTCCAT CTCCATTGCA CAATGTCTTA CTGACCTTAG TCTTCCCAAT CTCCTGGTCC
CGCCTCCGCT CCACAGAGCC ATGTCCTCTA CCTCTGTCAG CTCTCCGCCC CAGTCTCCCA
TAGGTCAACC AGGGCATGGC TCATACCATT CTCTCCAGCA ACCATTCCAT AACCAGAAGG
CCCATGGATC ATCTACTGCG AACAATTTTC CTTCTTACAG CCGGAGTAAT CCGCCCAAAT
TGGACGATAA GGTGGGCATG GTGGGCTATG CTACTGCGAT GGCCGCCGCT AGCAGAGAAA
AGGAAGGGCC GCCTTCTCTG TGGGGGATAG AACTCAAGTG GATCTCGTGA GTGGCTGCAT
GATAGCTGGC CAGACCACCA TTAACATCAG CCTTTAGACT GATCACGCTC GCTCTTCAAA
ATGCATTCCT CACCATCATC ATGCACTATT CACGGATATC TACCGCTCCC AATCGCACAT
ATTCCGCTGC CGCCGCAGTT TTGCTCAACG AGCTTCTCAA AGGTGGCATC TCAGTTTTTA
TTGCTCTCAA ACGTATCGAC AATGAGATGA CTGCATCTCC TCCTCCCCCG GTCTATTCAG
AAAAGCTTGA CGATAAGGAT TTCGACAAGC GATCTGGACA AAAGCTCCCT TCGATCATTC
ACCCCACGAG ACTGCAAGCT CTATCGAAGG CGGTATTTTC ACCCGACTGC TATAAGCTTT
CTGTTCCCGC CATCCTCTAT GTCATCCAAA ACAATCTTCA ATACGTCGCC GCATCAAATC
TCGACGTCGC AACTTTCCAG GTCACATACC AGATGAAGAT CCTTACTACT GCGTTCTTTT
CAGTTCTCTT GTTGCGCAAA CGACTCTCTC GAACCAAGTG GGCTTCCTTG ATTCTCCTGG
CTATCGGTGT TGGTATTGTT CAGATCCAAT CCTCTTCAGC ACCTGCTGCA TCTCACCACA
CCCACGTCAC TGTCAGCCAT GAACGTCAGT TGCGATCGGA GATTCCGGTT TCTGATGAGC
CCATCATGTC CCCGGAAAGA GTGATGCATC CTGTCAGGGG ATTCGTCGCT GTTACACTTG
CATGCATGAC CTCAGGTCTT GCGGGTGTGT ACTTTGAATT TATCCTCAAA TCGTCTTCTG
GGTCCAGCGC ACCTGATTTG TGGGTGAGGA ATACCCAGCT GTCCTTGTTC TCCCTTGTCC
CTGCGTTGGT ACCCATTATC GTCAACCCTT CGGGGCCGAA TGGCATGGGT TACTTTTCAA
AAGTGATGTC TTGCTTCGAC AACTTCAACG GATGGGCGAT TGGTACAGTA TTGACTCAGA
CTTTTGGTGG ATTGATTACT GCGTTGGTCA TCAGATATAG CGACAATATC ATGTGCGTTT
TCCGTTTTGG TATCTTTGCC CTTTGCTAAT GGCCGATTAC AGGAAAGGAT TTGCTACGTC
TCTTTCCATC ATTATCTCCT TCCTTGCCTC AGTCGCTCTC TTCTCCTACC CCATCACTCT
TAGTTTCATC GTCGGTGCTT CTATTGTTCT TTTCGCTACC TATACATACA ACAGCCCCGC
TCCACCTGCC TCTTCTACTC GCAAAGAAAT CGCAGTCCCT GGCTCGCCCA TTTCCACTTC
TGCACCTATA CTGGGTGAAC CTGAAAAGCC TAGTCGTGCG TCAAGCGTAA TCAATTTGCT
TGGCTTGGGA TCCAACAATG GGTCCAGAAA GCCTAGCGTT TCAGACATCA AATCATATGC
CTCTAGTCAG TTGGGCTTAT CGTCATACCC CGTGTCTGCC TCTGTATCAG CACCCGGTAC
ACCGAGGACA AACATGAACG ATTATGCGGA AAGCGGAAGG AGCAGCCCTG CAAGCTTTGG
TGCCGTACAG ACGAGTCATG GTGGATCTGG AGCTGGATTT GGTCGGGGTA ATGTGGGGGA
TAAGGTCAGG CCAATCTTGA GTTTGGACAT TGATAGAAAG CATGGTTAAG GGTTTGGTAT
CTGCCTGAGA ATTTTTTTAC AAGGGTTTCA AGTGGGTTTA GGTGCAAGTG GCAATGGTAA
TGTGGAGCC
|
|---|
| Protein sequence | MSVHIVHIVQ TPTYQYIFEQ VSHSCSCIYS PLCGPSLAQV TLSTHAVQPA RGQPHPISSP
LSSLDSSSLL PVSINNLSAR RTDLPSITAT SCSLGFPGMA HRTNTRSPSG LNRRPTDRCT
SQSGSLQTAS SPVQSTFGGR IYAAPEEDRG LIMRDRSERD RGENDWADEK GNSMGKTRGM
DVGVTRPKRR LSSLPNLLVP PPLHRAMSST SVSSPPQSPI GQPGHGSYHS LQQPFHNQKA
HGSSTANNFP SYSRSNPPKL DDKVGMVGYA TAMAAASREK EGPPSLWGIE LKWISLITLA
LQNAFLTIIM HYSRISTAPN RTYSAAAAVL LNELLKGGIS VFIALKRIDN EMTASPPPPV
YSEKLDDKDF DKRSGQKLPS IIHPTRLQAL SKAVFSPDCY KLSVPAILYV IQNNLQYVAA
SNLDVATFQV TYQMKILTTA FFSVLLLRKR LSRTKWASLI LLAIGVGIVQ IQSSSAPAAS
HHTHVTVSHE RQLRSEIPVS DEPIMSPERV MHPVRGFVAV TLACMTSGLA GVYFEFILKS
SSGSSAPDLW VRNTQLSLFS LVPALVPIIV NPSGPNGMGY FSKVMSCFDN FNGWAIGTVL
TQTFGGLITA LVIRYSDNIM KGFATSLSII ISFLASVALF SYPITLSFIV GASIVLFATY
TYNSPAPPAS STRKEIAVPG SPISTSAPIL GEPEKPSRAS SVINLLGLGS NNGSRKPSVS
DIKSYASSQL GLSSYPVSAS VSAPGTPRTN MNDYAESGRS SPASFGAVQT SHGGSGAGFG
RGNVGDKVRP ILSLDIDRKH G
|
|---|
| |