Gene CNL04720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL04720 
Symbol 
ID3254765 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand- 
Start bp322029 
End bp323102 
Gene Length1074 bp 
Protein Length307 aa 
Translation table 
GC content50% 
IMG OID638253943 
Productu3 small nucleolar RNA-associated protein 11, putative 
Protein accessionXP_568015 
Protein GI58261210 
COG category[S] Function unknown 
COG ID[COG5223] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTA GGAATCACAA GGAGCGGGCC CAACCCCTCC ACCGTGCCCG CCTCGGTCAT 
CTCGAAAAGC ACAAAGATTA CGTGCACCGT GCACGAGACT ACAAATCCAA GCAAGAACGT 
ATTAGAAAGC TTCGCGAGAA GGCGGCGTTT AGGAACAAGG ATGAGTTCTA CTGGGGTATG 
GTCAAGGGAA AGACCAAGGG TGGTGTGGCT ATTGGAGAGC GAGGGTTCGA GGCGTTAAGC 
ACTGAAGTCG TCAAACTTTT GAAGAGTCAA GATTTAGGCT ACATCAGGGT CCAGATAGCA 
AAGGATGAAA AGGTAACTCC CGCTATTACC TTCCGAAATC CGTGACGCTA AACTCGACAC 
TTATAGGCCG TCACTAAACT TCGGGCAGAA CTGGAAGTCA CTGCTCCCGC TTCAAGTGCT 
ACTGAAGAAT GGTCCGCTGC GTCTGAGCTA GCTGAGGTGG AAAAGCTCGC GGAGATGGGC 
ATTGTCCTCA GTCCTGCTTT GACCCGCAAG AAAGGAAAGG GAAAGGGCAA AGCGCCCTCA 
GAAGGGCATG TGGTATTTGT CGATGAACGG TCTGATTGTA AGTCGTGGTC TGCCGGATGT 
TGCTGACATT CTAGTTGAAA ATTACGGGAA TGAGTATGAA GAAGAGGAAC AGCAGGGAAC 
GGAGGAAGAG CAGATCGACC TGGGTTGGGA AGAGCCACAG CCTGTGAAGA AGAGAAAGTC 
AAAGGCTGTT GAGCTGGCGA AGGAGGAATT CGACGAAGAA GCAGCAGCTC AAGAAGCAAG 
GGTGCGTCTG TCTAAATATA TATATTTATC ATATGCCTTC GACTAACAAC TCCATTGAAG 
GAATATCGTC TACAACTTCT TTCAGATCTT TCAGCCCACC TGAATCGACT CAAACTTTTG 
CGTCAAGCCG AAGCTAAGTT AGAAACAACG AAAGGCCTTA TGGGGAAGGG TGCTGCCAGA 
AAGATACGAG ATCACGGCTG GGTGGAAGAC GAGTCTCAAC CGGAAGATCG TAACGGGGAC 
AGGAAGAAAT GGCAGGGCAA GATCTGGAAG TGGAAGATGG AAAGGAGAAA GTAG
 
Protein sequence
MSRRNHKERA QPLHRARLGH LEKHKDYVHR ARDYKSKQER IRKLREKAAF RNKDEFYWGM 
VKGKTKGGVA IGERGFEALS TEVVKLLKSQ DLGYIRVQIA KDEKAVTKLR AELEVTAPAS 
SATEEWSAAS ELAEVEKLAE MGIVLSPALT RKKGKGKGKA PSEGHVVFVD ERSDFENYGN 
EYEEEEQQGT EEEQIDLGWE EPQPVKKRKS KAVELAKEEF DEEAAAQEAR EYRLQLLSDL 
SAHLNRLKLL RQAEAKLETT KGLMGKGAAR KIRDHGWVED ESQPEDRNGD RKKWQGKIWK 
WKMERRK