| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04650 |
|---|
| Symbol | |
|---|
| ID | 3254919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | - |
|---|
| Start bp | 298782 |
|---|
| End bp | 301631 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 847 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638253936 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_568008 |
|---|
| Protein GI | 58261196 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.793676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCTT TTTGCTTTCT TTCATCCCCC AAATTGCCCT CCATGCTATT CCACAGCGAC
AAACGCCCCC GCAGCGCCCT CACAGCAATA TTCACAGAGT CAGGACACGC AGACATCCTC
CTCGGCATAT TTAACAACCT CGCCATACAA CATATCCCCG CTCTTCTACG CGTTAGTGCT
CTTTCTCCTC TCAGCCCAGT CTACAAGCTG ACACTACACA GGTTAACAAA TACGTAAACT
CAGTATTTAC TTCTTCTTCC CAGCTCCAGC TTCGTTATCG AAAGTCCTAT CATTCCGTTT
CCCCTCATAC CCAATCGTCG GCCCCCAGCC GACTCACAAA CTCTGCCGAA GAGCTCGGTC
TTCTTATTGA ACAAGAAAAG CGCCTATCCA ATCTCTGCCC GTCAGAGATC AGGTGCTTAC
ACTTTCCCAA TGCTGAAATA GCTCAAGTTC AACTTAACCA CATCCTCGTA ACAGAGCGCA
TTAATAGGGA GATCGTATTT CCAAATGCCC CCGATTCGAA CTATCTCTGG GATGGATGGT
CTGTTTGGAG GATCAGAAAC GCCTACGAAT TTGATGGAGA GTCAAGAGGT GGGAAGAAGG
CGCAAGGTGT ATGGAAATGG AAAATGAACT TCGGTGCGCC AATCGACAGT GCTACCATGT
GTGTAGAAGA CAATGTCGTG GCTGTCGCCT ACGCTGTGTA GGTACCTTCT CTTTTCTTTT
CTCTCCACGA CACTCAGATT ACCATAGCAA CCACCCACCA TGTGACGAAA TTTCCTACAA
CTCTACACTC AAGGTAGCCC ATCGAATCTA CTTTTACAGT CTCATTCCGC CGGTCGGCAC
ACCTCAACAA TCTGATGGTA TCTTTCAACC ACCGATTCCC CACCCAGAGG CCAAGCTGCC
ATATGTTGAA GTTCTTGTCC CAGCAAAGCA CCATATGCAC CATATTGAGC TTCAACTGGG
CCCAGGTGGT AAAGTTGGTT TACTTCTGGT TTCTGCAGAC ACGACAAGGC AAAATTTTGT
AGGCCTTTGG GACTGGAAAG CGGGTGTGTC TATTGGTGTA AGTCTGTACC GTTTTCCTTC
GAGACAAAAA CTGACATGTG GTAGAAACTT TCTCCTACGC CCGACGTCCC TGTGTGCGAA
GATTTCCGCT TCTTGGGCCC CTTTATTCTT TCTTCTGTTA TGAGGGACCT TGTCAAGAAG
CCTGAAGACG AGCTGATGGT GCTTCATAAC AGGGAATTGG ATTCCTGTGC ATCCGGAGGT
CGCCCAAGTT GTCTTTCGGC TTCCACCCCG CAGAGGCCCA AGCCTGCCAG TGTCTACGAT
GATATTGATT ATGATTCTGA GGAGGACACC TTTCAGGGCG TTTCAGAGGC TGTTCCCCCG
CCCTTGGAGA CGGTGTACAG CATCGACACA CACGCTCCCT TACCCACAGA ACGAGGTACT
CGGCCGTTCA AGCGCAGCTA TATAACACAT TTCGGCCCAG GCTCCGAAAT TGATGAAGCA
TATACCTGGG ACTGGGACGA AATTCCGTTT TGCATGCCTC TCGCTTCCCT TCAACTTCCT
ACTTTGAATA CAACCCCTTT GGGTGTTTAC GAAACCCCTC TAGATTCTAT CATGGATTCT
TTACATGTCG ATACTGACTT CCATCCAGTT CGCCTCGCCT TTGACAGCTT CTCGGTTGAT
CCTGCGCTCT TGCAGGGCGA GCGATTGGGT GTTATACCCT TTACCTTGTC TGGTGATACC
AGTGATGGTC TTGGTGCGCC AAATGTTGTC AGATGTAAGG GCATAATCGA CATTACGACC
CTTCTTGGAA AGACTATCGA AGCGATGCAA TGGCACATGG CGAAAACAAA GGGTATAGAT
ATCAAACTGT TAGCTCTCGG TGCGAAGCTC AACAAAAAGA CATGGAGAGA TCAGTTAATA
GAGGCATTTG AGCTGTTCCT TCGTTCTGGG CAGGATGATG GGTGGGAAAC TGAGGAAGAT
GAGCCGAGCC GGTACAAGTC CAAAAAGAGC AGATCAAAGA GAATCAGCAA AAGAGCTACA
ATTATATCTC CGAAACAAAC CAAATCCACT TACAAGTGGG AAAATCCACA TGTTGTTCCC
TGGAAATCTT GGGATTCCGG GGTCAGCATA CGTTTCAACC ATCGCAATAT CGTAACGGCT
TGGGGTACAC GAGCGGTCAT GGTTGAGCCT GTGCCAGATG CAAAGCCCTT GGTGAGGAAG
AAGGATGGGC AGCTCATGAG GCAATACTGG ATGACCTTGC GGGATTACTC TCGACACACT
TTCCATGATC ATCCTGGACG TCCACGTCAA GTCTTGGGAG GTCTTCAACA TCCATATTTA
TCTCTCGACA AAGCTTCATT ATCCACTGCC TCTTCATCCA CATCACCTTC TCCCCCTGAA
AGCGGTGCCA AACGTGAGAA ACCGCGCGTC ATCAAATGTC CGCTAGTGAA CCCTGTCCCT
GTCGCCCAGA TGGACAACAA TTTGATTGAA CACAGTACCT CGGAGATTCA GGATAAAAGA
CTTTGGACGA AGCGCATATT TTATGATGAG CTCTTGCAGT CGAAATTGAT GTATAAGGAA
GTCAGAGCAA AGATCTTGTT GGATCAAAAG AGGCCATATC GCTCGTCTGC TTTCGATGGC
AAGATGGTCG TTATCGGTGT GGTAAGTTTC TTCCTTCTAT TTTGCTAGTT GAAGATTGAG
GCTGATTGAT GGGGAAGGAA TCCGGCGCTC ATATATTTAC ATTCTGAGGA GAGTTCGGAA
GGGCAAGCCA TTTGTCAGAG TCTGATGTGC ATGATGGCGG CTTGAGTGTG TTGCTTGCAA
TGCAATTAAG AAAAGAATAA TGGAGTTTTT
|
|---|
| Protein sequence | MLSFCFLSSP KLPSMLFHSD KRPRSALTAI FTESGHADIL LGIFNNLAIQ HIPALLRVNK
YVNSVFTSSS QLQLRYRKSY HSVSPHTQSS APSRLTNSAE ELGLLIEQEK RLSNLCPSEI
RCLHFPNAEI AQVQLNHILV TERINREIVF PNAPDSNYLW DGWSVWRIRN AYEFDGESRG
GKKAQGVWKW KMNFGAPIDS ATMCVEDNVV AVAYAVNHPP CDEISYNSTL KVAHRIYFYS
LIPPVGTPQQ SDGIFQPPIP HPEAKLPYVE VLVPAKHHMH HIELQLGPGG KVGLLLVSAD
TTRQNFVGLW DWKAGVSIGK LSPTPDVPVC EDFRFLGPFI LSSVMRDLVK KPEDELMVLH
NRELDSCASG GRPSCLSAST PQRPKPASVY DDIDYDSEED TFQGVSEAVP PPLETVYSID
THAPLPTERG TRPFKRSYIT HFGPGSEIDE AYTWDWDEIP FCMPLASLQL PTLNTTPLGV
YETPLDSIMD SLHVDTDFHP VRLAFDSFSV DPALLQGERL GVIPFTLSGD TSDGLGAPNV
VRCKGIIDIT TLLGKTIEAM QWHMAKTKGI DIKLLALGAK LNKKTWRDQL IEAFELFLRS
GQDDGWETEE DEPSRYKSKK SRSKRISKRA TIISPKQTKS TYKWENPHVV PWKSWDSGVS
IRFNHRNIVT AWGTRAVMVE PVPDAKPLVR KKDGQLMRQY WMTLRDYSRH TFHDHPGRPR
QVLGGLQHPY LSLDKASLST ASSSTSPSPP ESGAKREKPR VIKCPLVNPV PVAQMDNNLI
EHSTSEIQDK RLWTKRIFYD ELLQSKLMYK EVRAKILLDQ KRPYRSSAFD GKMVVIGVES
GAHIFTF
|
|---|
| |