Gene CNL04550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL04550 
Symbol 
ID3254820 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand+ 
Start bp267808 
End bp268944 
Gene Length1137 bp 
Protein Length285 aa 
Translation table 
GC content45% 
IMG OID638253926 
Productccr4-not transcription complex, subunit 7, putative 
Protein accessionXP_568004 
Protein GI58261188 
COG category[A] RNA processing and modification 
COG ID[COG5228] mRNA deadenylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAGC AAGAGCAATT ACCATCAAAA GACTATGGAA TAAGAGAAGT CCGCACCTCC 
TCCCGCTCGC TCAGCCAGTC GCTGACAACA TGACAGATAT GGGCAGACAA CCTCGAATCA 
GAGTTTGCAG CTCTGAGACA AGCTGTCGAA CGATATCCTT ACATTTCCAT GGTATGTCCC 
ACAAATTAGC TCAAGATATT CTATAATTGA TGGTTAACGT GTCTGTAGGA TACTGAATTT 
CCCGGTATTG TCGCGCGTCC AATAGGCAAC TTCAAGACCG GCTCAGATTA TCACTTCCAA 
ACTATGCGCT GCAATGTCGA TATGCTCAAG ATCATCCAAC TGGGCATCAC ATTATGTGAT 
GAAAACGGAG ATTCGCCAGA GGTTTCAACA TGGCAGTTTA ATTTCGCGTT TAGCTTGGGG 
TGAGTCAGGT TCAGCTTTCA ATGGGACGTT CTTTGTCCAA GTCGCGCGCT AACGATATCC 
TTTATTCTAA AAGAGAGGAC ATGTTTGCTC CAGACTCCAT CGATTTATTA AAAAGCTCAG 
GAATCGATTT CAAGCGCAAC GAGGAAGAAG GAATCGACGT CGAATACTTT GGCGAGCTTC 
TCATCACATC TGGGCTTGTT CTCTTTGACA ATATAAAATG GGTGTCTTTC CACTCGTACG 
CCTTTGAATC CCTTCGTAAC TTTCGCGGAC ATTGCTGACT CACATTAGAG GGTACGATTT 
TGGATATCTT CTCAAGATCC TTACATGTGA ACCTCTTCCA GCAGATGAAA CAGACTTTTT 
CCGCCTTCTC TTTATTTGGT TCCCTTGTAT CTACGACATC AAGCATATTG TGCGGTCCAT 
TAAAACTCTT CGAGGGGGAT TACAAGAAAT TGCAGAGTCA CTGGGCGTCA AGAGAATAGG 
ACCTCAGCAC CAAGCAGGAT CAGATTCTCT CTTGACCGCC GCAGTTTTTT TCAGGATCCA 
AACGATCTAC TTTGACGGAC ACCTGAATGA TGATTACTAC AAGTGAGCTC ATTTATTTAT 
GTCATGGTGA TATTGCTGAC CCCATCTAGA AATTACTTGT ACGGGTTTTC TTCAGGCCGT 
TTAGGCAAAG CATCTCCGGC AGCTGCTGGC GAAAATCTCG TTGACAAACC CTATTAA
 
Protein sequence
MPQQEQLPSK DYGIREIWAD NLESEFAALR QAVERYPYIS MDTEFPGIVA RPIGNFKTGS 
DYHFQTMRCN VDMLKIIQLG ITLCDENGDS PEVSTWQFNF AFSLGEDMFA PDSIDLLKSS 
GIDFKRNEEE GIDVEYFGEL LITSGLVLFD NIKWVSFHSG YDFGYLLKIL TCEPLPADET 
DFFRLLFIWF PCIYDIKHIV RSIKTLRGGL QEIAESLGVK RIGPQHQAGS DSLLTAAVFF 
RIQTIYFDGH LNDDYYKNYL YGFSSGRLGK ASPAAAGENL VDKPY