Gene CNL04470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL04470 
Symbol 
ID3254959 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand
Start bp242888 
End bp244659 
Gene Length1772 bp 
Protein Length466 aa 
Translation table 
GC content53% 
IMG OID638253918 
Productubiquinol-cytochrome C reductase complex core protein 2 precursor, putative 
Protein accessionXP_567997 
Protein GI58261174 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTCG CTGGTGGTCG TCGTATTTGC TCAGAGAATC GCTCTTCAAT ATACACTTTC 
CTTTCCCCAA CTCCCCATCC CCCACCACCC GCCCCCATGT ACTCCCTCAA CAGGCTTCCC
AGGAGCTCCG CATTCAAAAA CTCCGCCAAT CTCCTTAGGC GAAACGCCAG CACCACTTCT
GCTGGCGGTG TCAATGTTGT CGGTTTCGAA AACAAGGGCC CTGCTGCCAC TTCCAGCTTG
ACCGTCGCCA TCAAAGCTGG TTCCCGATAC GAGACTACCC CCGGTGTCGC CCATGTTTTG
AAGAGCTTTG CCTACAAGGT GGGTTTCTTG GGAATTTGCG TTGGATCTCG CTGATTGCGA
TGTAGGCCAC TGCTTCTGCA TCAGCTTTGA GAACAGCTAG GGAGGCGGAG CTGTACGGTG
GTGTCTTGTC TGCTGCTCTT ACTAGGGAAC ACCTTTTGCT TTCTGCCGAG TTCCTTCGTG
GCGATGAGTG AGTTTTACAG TAAGAAGAGA TGAAGGCATC CACTAAACAT TAACAGAGAA
CACTTCCTCA ACGTCCTCGC TTCCGTTCTT TCCTCGTCTC AATTCTACCA ACACGAGCTC
AATGAGCTCG TTATCCCTGT CGTTGAGGCG GAGACCATCT CTGCCCAGGC TACTCCTTCT
GCCATCGCCC TCGACCTTGC CCATTCCCTT GCTTTCCGAC GAGGTCTCGG TAACTCTCTC
TACGCCAACA AGAACTACCC CGTCTCCATT GACGACGTGA AGACTTTTGG TGAAGCCGCT
TTCGCCAAGT CCAACATTGC CGTCATCGGT ACTGGTATCT CCACTGAGGT CCTCGCCAAG
TCCGTTGGCA ACGCTTTCGG CACTGGTACT AGCTCCAGCT CTAAGCTCTC TACTCCCAAG
GCCGCCTATT ACGGTGGTGA GACCCGGGTG CCTCTCGACA TCCATGCTCC TGCTACTGCC
GCCCCTACCA TGGTTATTGC CTTCGGCACC TCCGCTCCCC CTTCTGCCGA CCTCAAGGTC
CTTAAGCACC TTCTCGGTGG TGAGACCTCC GTTAAATGGA CTCCTGGTGC TTCTCCTCTG
GCTCAAGCCG CCGACAAGAT CCCCGGTGCT TCCGCCAAGG CTTTCCTCCT TCCTTACTCT
GACGCCTCTC TGTTCGGTGT TGTTCTTTCT GCCCCCACAA GTGCCGAAAC CAAGGCTTTG
GCTCAGGAAG TTGCCAGCAT CGTCAAGGGC GCCGGCGAGT TCAAGGAGGA GGAGGTGAAG
AGGGCCGTTG CCAAGGCCAC CTTTGAGGAC GCCGCTAGCA CCGAAACCTT GTCCGGTTTC
GTCGCCGCTG CTGGTCCTGC TGCCCTCATT GGTTCCGTTC CCGAGGCGCA GTCCTTCTCT
GGTGTTTCTG CTTCTTCCAT CTCCAAGGTG AGTTTATAAG GGTTATCGGT ATGCGATGAG
TATGCTGACC GTTTTCAGGC TGCCGGCGAG TTGCTCAAGG GAAAGCCCAC CGTTGTCAGC
ATCGGTAATA TCTCTGTCCT TCCTTATGGG TGCGTTCTTC ATTCCTAAGA TTGGACATGT
TGATGCTAAT TTTTTTTAGC GACGAACTTG GTCTTTAAGG GATTAGAGGG ATTGCAAAAC
TAATAGTCAT GGCATTTTGG GAATGATGAA GTGCATATGA TTGGCATTAT GTTCTCTGAA
TTCAAAACAA GAGTTCAAAT TATGATCGAG CGCGATAGAA TCTGATAGTC CTTTCCTCCA
CTCTGTAATT GGTCGGCTCC GTATGAGTCT AT
 
Protein sequence
MRFAGGRRIC SENRSSIYTF LSPTPHPPPP APMYSLNRLP RSSAFKNSAN LLRRNASTTS 
AGGVNVVGFE NKGPAATSSL TVAIKAGSRY ETTPGVAHVL KSFAYKATAS ASALRTAREA
ELYGGVLSAA LTREHLLLSA EFLRGDEEHF LNVLASVLSS SQFYQHELNE LVIPVVEAET
ISAQATPSAI ALDLAHSLAF RRGLGNSLYA NKNYPVSIDD VKTFGEAAFA KSNIAVIGTG
ISTEVLAKSV GNAFGTGTSS SSKLSTPKAA YYGGETRVPL DIHAPATAAP TMVIAFGTSA
PPSADLKVLK HLLGGETSVK WTPGASPLAQ AADKIPGASA KAFLLPYSDA SLFGVVLSAP
TSAETKALAQ EVASIVKGAG EFKEEEVKRA VAKATFEDAA STETLSGFVA AAGPAALIGS
VPEAQSFSGV SASSISKAAG ELLKGKPTVV SIGNISVLPY GDELGL