| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04400 |
|---|
| Symbol | |
|---|
| ID | 3254902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | - |
|---|
| Start bp | 218777 |
|---|
| End bp | 221632 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638253911 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567991 |
|---|
| Protein GI | 58261162 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTCAACCC GTGTCTCTTC CACCCATCCG ATAATCTTCA TGTGTAAAAG GCCTTCCAAT
CCATAGAAGA TAATACCCAT CGAGGCTGCC AAGCGACAAG TGCAGCAAGC TCTGCGACGA
TCTTGACGCC GCCTTTTCCC ACGCTCATTT GATCACATTT ACAGTGAACA TCGACTGCTG
CCATGGCTGA CACAACAAAA TATGGTAACG CGGTCGAATT TGATGTCGAC CTGCACTCTA
TCTATGCTGC ATATATGTGG GTCTATGCAA TACTGAATTG GATCAAGTTG TGGCTAACTT
TGGTTTCAGA GGTCTTTTCG AATCGACAAA TACTGATTGG TGGGAGAAGT CATGGGGAGG
GTACTTTGTG TCTTTTAACG AATTCCTGGG ATTTGGCTGG GAAGTGATGG GTGAGTGCTT
GCCATAACAC TGCTGTGGAC ATTATAATGA CTTCAGGGAT CAGTTGTCGT AGATAGTGAA
ACGGGTAAGC CTCATGTGGC TGTGAGGAGG GAGCAGATTG CACTGTTCGC CAGGATGATT
CGGACTCGGT GCGCCCACCT ACATAGTCCA ATATCTTGGT TTCTCAAGCT AATGTCCCTG
CAGCTTTGGC GAGTCACTCT CCAAAGACCC ACCGACAACC TTGCCTCTCA ACCCCGTTCC
GACTCGCAAC CTAGCCCTTC GCCGTCTCGT CACCGTTCGA GATCTCAGCG GCTACCGCAA
ACTTGCAGCT TCACTTCCGG CGGCTGAGCT GTCCTATCTT CGTTCACGGG TACGCTCCGG
CGAAGCTACA GTCATAGAAC AACTCTTCTA CGCAGGCGGG TCCAGTGGAG AAAGAGAAAC
AGGAGGTGTG GGCGTCCGCG ACAATGGTGT AGGGTATACA TTTGCATGTG TCAAGACAAA
TTGGTGGGAG AAAGGGGGTC CGCCATATGG ATTGATACCT GGGCAAGGCC GTACACACTC
TGGAAGCACA GGACAGGGAA GTAACAAGGG GCTCGTATTG GAGATTGGGC TTGCAGTGTT
GAGATGCGCA AATCTTCGGG CGCTGGTGAG TACTCTCGTG CCCGTAACCT AAACAAAGGA
TCATGGAGCT AAAGGACCTC TCAGGGCGTC TGGCCGCCGG TCCCAGCTGA TAATTACCGC
AAATCGCATT ATGTCGTCGA AGAATGGGTC GACAAGGTGG GTCTCACAAG CTAATCATCA
TCCCGTCAAA CGGCTGACTT GTCATCCCTA GCGTGCGAAT CACAACCCAC CAACGTTTCC
AAGGGCTTAT GCCTTCGGTC AGAGCGAGTT TGTGGCCGAG AAAAGGGTAG AGACTATCTT
AGAGTAAACT CATACCATAT TACTCCTGCT GCAGGACGAT TGCTGACGTC CTTCAGTGCG
ACTCTCAACG CTCTTGCTTC GCAGGAGAAT GACGGCCACG CCAATGCCCT TATCTTGTTG
ACAGTCGGTG AACCGGTTCC TCTTCCGTTG CCCAGCTCTT CGACCTTACC CAACAACGTT
TTGCAATTTG ATGTCCTTGC TCTCGAATAC AATTTTTTGC GGCGAGCACA GGCTCAAGGA
ATACCTGGCA CTCCAGATAG ACAACAACCT CTCACATCCC TCGCCTCTCT TTTACAAACC
CTTCAAATTC CTGTCCAACC TTTTGCGCCT ATCGGCAACG CTGGCAATGA CGCGTACTAC
ACTCTTCTCG CGTTTCAAAA GCTTGTGATG GGTGAAACAC GTCTTCCAGA CATCCTCTTC
AGCCAGCCAG GTCCCTATGC GTCGATGCAA TTCCCACTGT CTCCCCGCAG CTCGGTTGCC
TTACCCTTTC CCCAGTATCC TGCTGTGGCT CTGCCTGTTC CTGTCATGCC CGCTGCTGCA
GGTGATTCTC GTCGAAGTTC GACTTCATCA AACCGCCCAG GATCAGGATT TGTACAACCC
TCTTTACCTC CATCCTCGTC CGATCGCACC CAAGGAGGCC GATATGCTAG TGAAACTTCG
ACCCGACGAC GCCCTATTTC CATTGGTGAT CCTCTCAATA TATACACGGA TTCTTCTAAC
CGTACTTCTA GCGATCTGAG AACGCCTAAC GGGTTAGCGC AAGACGGCAA TTCAGGTATT
GGCTCGCAAC GAGGGAAGCG AATGTCAGTC GTGCGATCTC AGACTGTCTT CTGGGACGAT
GCAGCCTACG CAGACTCAAA TTCTGTTCGA GGCGCGGAGC TCAAGACTCC GTTGCCTAAC
GGGTTGACCG GGGAGTCGAC ATCGTATGTG CAAGAACAAC GATCTAGAGC GCGAGAGGGA
CCGCCATTAT CAAGGAGTGC AGGTAAAAGC ACATGGCTGG GTAGTCAAGG GAGGAGTATT
TCATATGATG TTGCAGGCTC TGCCGGTGGA ATGAGTGGTA CATCTAGTGC CGCCAATTCA
CCAATTGACA AACCGTCGGG ATCCTTGTCG AACATCAACC TACCACATAC CGGCATGAAA
CCGTCTGGAC TTTCGAGTAC CAGCTTACAG AGGGATACGA ATGAGGGTGC CTACTCGTCT
GGAACAGGTA GCACTGGCAA TACCAAACCC AGTCCGGGCT CAAGCGGGGA AGTTCAAGGT
ATGGGGCATC GAGTAAGATA CAGTACGGGT TCAATCCAAG CTGTAGATGA GGTAAAGAAT
GGAGCGAAGA ATGGGAAAGA GAAAAAGAAG GGCAAGGGTC CGAAAGATTT GGCTGGCGCG
ATTGCCAAAT TTTGGATTGG CTAGACAAGC GTCACCAAAG AGTTTGATTA CGACTAATAC
CATAGGACAA TTTTATATTT ACAAGTAACA ATACTGTGTA CGCGAACCAC GTTCTGTAAC
ATACTATCAC CGTACTTCAT GCATTATTAT GAAGTT
|
|---|
| Protein sequence | MADTTKYGNA VEFDVDLHSI YAAYIGLFES TNTDWWEKSW GGYFVSFNEF LGFGWEVMVV
VDSETGKPHV AVRREQIALF ARMIRTRFGE SLSKDPPTTL PLNPVPTRNL ALRRLVTVRD
LSGYRKLAAS LPAAELSYLR SRVRSGEATV IEQLFYAGGS SGERETGGVG VRDNGVGYTF
ACVKTNWWEK GGPPYGLIPG QGRTHSGSTG QGSNKGLVLE IGLAVLRCAN LRALGVWPPV
PADNYRKSHY VVEEWVDKRA NHNPPTFPRA YAFGQSEFVA EKRVETILDA TLNALASQEN
DGHANALILL TVGEPVPLPL PSSSTLPNNV LQFDVLALEY NFLRRAQAQG IPGTPDRQQP
LTSLASLLQT LQIPVQPFAP IGNAGNDAYY TLLAFQKLVM GETRLPDILF SQPGPYASMQ
FPLSPRSSVA LPFPQYPAVA LPVPVMPAAA GDSRRSSTSS NRPGSGFVQP SLPPSSSDRT
QGGRYASETS TRRRPISIGD PLNIYTDSSN RTSSDLRTPN GLAQDGNSGI GSQRGKRMSV
VRSQTVFWDD AAYADSNSVR GAELKTPLPN GLTGESTSYV QEQRSRAREG PPLSRSAGKS
TWLGSQGRSI SYDVAGSAGG MSGTSSAANS PIDKPSGSLS NINLPHTGMK PSGLSSTSLQ
RDTNEGAYSS GTGSTGNTKP SPGSSGEVQG MGHRVRYSTG SIQAVDEVKN GAKNGKEKKK
GKGPKDLAGA IAKFWIG
|
|---|
| |