| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04300 |
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| Symbol | |
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| ID | 3254790 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006681 |
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| Strand | + |
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| Start bp | 192228 |
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| End bp | 196821 |
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| Gene Length | 4594 bp |
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| Protein Length | 1175 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638253901 |
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| Product | hypothetical protein |
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| Protein accession | XP_567981 |
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| Protein GI | 58261142 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5113] Ubiquitin fusion degradation protein 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTT GTTGCCGCCG CGCAAGTCAA TACGAAGCGT CACCCATAAA GTGCTTGAAC
TGCTTACTTA TTACTCTCTC CCCTGTCTTC CTCCCCACCA TGGCTGACAA CTCAAACCTT
TCAGACGCTG ACAAGGTGAG CACACTCAGA TCAGGACACC CTCTTACCCC CCACAGATCC
GTCTCAAGCG TCTCGCCCGC CTCGGCACCT CCACCCCCAT CCCCTCGCAG ACCCAGCCAC
AGCAACAGCC CTCGTCCAGC AGTACTCCCG AGCCTCATCA CCCACCCTCC GCCTCCTCAA
GACTTCTTGC AAACCTTCCT CCCGCTGCTA GTCCCACATC CTCCTCCCCC GCTATTGTGT
CCCCAAAACC CTCTGCTTCT ACCAAACCTG ACCCTCAAGC CGTCCAACCC AAGCTTTCCG
TCACCCCCAG TCTTTCTCTC AAGAGACCAT CATCTGCTAG TACCCCCAGA GATGAACCGG
TGGGTCCGAG AATTGTGCAT ACCAAGCCAA TCCAGCCACT TGTCAAGACG GAATACAAGG
CATGGGAGAC CGAGAAGGTT GGGCAAGTAT TCGCTGTTAC ACTAAGTGTT AGTCCATTTG
CAGACTGTGT TAGCCAACGA CTAACTATTT ACATAGAAGC AGAAGGCTCA GGAAACCGAT
TGGTCCCTTT GTTGGCTCAA AGATCTAGAA CAGGAGCTCA ATGAAGAAAG TAAGTTGTGC
CTGTCTTGAT CAAATACTAA TGTAATAGAC TATCCTTCTC CGCTCAGGAC CGATATAGAG
CTAGCTGATA GACTTCTCAT TGCCCGTCTC TCCATGGACC CCACGCTTAT GGCTCAGTCC
GATGATCCCG ATGCCCTTAC GATTCTTGCA GGACTACCTC AGAATGAGAC TGTCTTTGAA
TACCTTGCTG GGTGTTGGAA GAGGTTGTAC CAAGCCAGTA GGGACGCCAA CCGGTATGCC
TTCTCCGAAG ACGAAAAGAG TCAATGGGGC AAATCAATGG ATAAGATCAA GGGGCTGGTT
GTCTCATATT GTGGTATGAC GATCGAGGAC CCTACCATGT TCCCTCAACC AGCAGAGTGA
GTTGCTTGGA TCACTCGAGA CGCTAAAAGT AACGTTGGAT TCTTAGGAAA CCGCTTGGGC
CGGCCGAATT TCTCCCGCTT CTCCTTTCAG TTCATCAACC GTCATCCGGT GATCTTCTCA
TGTCTACCCC TTCCGTCCCG ACGCCGCTAT CTGGTCCCCT TCAGCCCAAC GACTTGTTAC
CTTTCCTCCA GGACCTCGCT GCCGGTTTTG ACGATGATAC TTTAAAAGAT GTCATCAGCC
CGACACTGAG TCTATTCTTC CAAGAGTGGT TCAAGATCAC TCCTACCCCG GATATCATGG
GTGCGGAGTG GAGGAGATAC CTCGGTGCTA TGAACTTGTT GGTACAAGTC AAACATATAG
CCGCGTTTGT AAGTTGTACT TCTATGACCT AATCATTAAG GCTAACCATG AGCAGCTGCC
CACTTTACCT ATTTGGGTGG CGCCAAATGT GACAGCTCCA AAACTCGAAT GGCAATCGCT
TTTAGGTCCC CTTACACGTC TGAGTGTTTT CCCTAGAGAA TTCGTGAGTC ATTAGCGTCA
ATTTTGAATC GTGAAACTCT CTAAAACAAC CATGTGCATA GCCTGAAATT TGGAAGACTT
ACTTTTCTAA CCCTACCGAA AGGAAGAAGG AAGACATTGA CGCGAACAAA AGCAACCTTC
GATTTACCCT CGGAAGCCTA CATGTACGTA ACAAAGTCGC TAATTTTTGC TGACTTGATG
ACAGTCATCC CTGTTTAACG TCTACAATGC CATCGTCCGT GCATCACCAG ATGCCAGAGA
GGGTATTCTT GACTTTTTCA CACTTGCTTT GCGTCTCAAC GAGAAGCGTG CGGGAATGCG
AGTTGACCCT CGAACCGTCT CCTCAGACGG CTACATGACG AATCTTCAGG TCGTGCTGCT
GAAACTGTTT GAGCCGGTAA TGGACGCCAG ATTCTCCAAA ATTGACAAAG TTGATCCAGC
ATATTATAAA TCCTCGAAAA GGATCGATAT CTCAGAAGAG ACAAAGATTA AGGGCGCCAA
GGAAGAGGCG GATGAATATT TTGGAAGCTC CATGGATGGT ATGTTGTCAC GCCTTTCAAT
ATAAATGCAT AGACTCAATT CCTTTTTAGT GGACACGAAA CCAAACTTCA TCTCCGACTT
GTTTTTCCTT CTCAATAGCT ATCTCCATCT TGGTGTAGTC AAGACTATCT CAACTAGGAT
TCGAGCTGAA AAAAATCTGA GTGAAATAGA AAAGGAACTG AAGAGAGTTG AGGCATCCAC
AGGCGATTGG GCAAATGTAA GGACATGATT CTTACCCGGT TTTATTTTTG GTTAACATCT
TTGCAGAATG CGACATTACA AGCACAGGGC GAAGCAACAA TTAAAAAGTT GAAGAGCGAC
ATGTCTGTTC TTCATGCTTC TATTCACGCC TACGACACGC AGCTTTTGGA TCGAGATATG
ATTAGAATGG TTGTCTCCTT CCTCAGCTTT GTTATGACAT GGCTCATCCG CCTTGTCGAC
CCAAACCACC AGTACCCAGC GTCGCCTCTT AATTTACCGT TACCAAAAGA AGCTCCAATG
GCTTTTAGGA TGTTGCCAGA ATTTTTCATC GAAAACATCG CAGAGTACTT TGAGTTCCTC
GCCAAGTGAG TGACATTTAA CAAGCTCGGG AATAAACTGA CGCATACCCC AGATATGATC
CCGATGCGCT TGATGATGTA GATAAGGACA TCTTTATTAC CTTTGCCATC ACTTTTCTTT
CTCCCAACTA CGTTAATAAC CCTTTCCTCA AAGCTAAACT TGTCACGGTG TGTTACCTCT
TATTGTCTCG TGTGAAACTT GACTAACAGC ACCCTAGATT ATCTCATATG GCCTGTATCC
CATGGGCTAC TGGCGCCATG GTCCTCTCTT TGACAGACTT AGTATACTCA GCGTGGCCAC
AGACCACTTG ATGCCAACTT TGATCCGTTT CTTCATCGAT GTGGAGATCA CTGGAGGTCA
TACGCAATTC TGGGGTGAGT GAATATGTCT CTAGTCTAAT GTCTTGACTG ACTGGTGATG
CAGACAAGTT CAACTTTAGG TTAGCAACGT CTTAATTTCA AGATGAATGG ATTTTGACTG
ACTGTGCACA GGCGCGACAT TGGCCACATC TTCAAAGCCA TGTGGACAAA CCCTCTCCAC
CGGGAAGCAT TTGTCAAGTC TAGACAGTAC GTCCCAGGTA TCGCTGTATT CATGGTGTTG
GGTGTCTAAC TTTTTTGCGT TTCCCCCCCC TCCAGTGATG ACTTTGATCA GTTTATTCGC
TTTGTCAACA TGCTCATGAG CGATACTACA TTCCACCTCG AAGAGTCCTT GACCGGTTTG
GCCAAGATTG GACAAATAGA GTCTCAAAAA GCCAACACTG CTTCGTGGGA AGCATTGCCC
CAGTCAGAGC GGGAGGATCT CGATGGTCAG TTGAGGCAGA CGGAGGGTAG TGTCCCATGG
CACACGCAGA TGGGCTTATC AAATGTCAAA TTGATTCGAG ACTTTACGGC AACCACACGA
GAGCCATTTG TTGCTCCCGA GATTGTTGAC CGTTTGGCAG CAGTAAGTTG GTTTACTGAT
GTGGGCGTGG ATGATGGCTA ACATTCATTA TTTAGTCCTT GGATGAGAAC CTTACAGCTC
TCGTTGGCCC AAAGATGTCG GATCTTAAAG TATCCAACCC CGACAAATAC TACTTCAAGC
CTAAGGACCT TTTAGCAGCT ATTGCTCAAA TCTACCTCAA TCTTTCCGTC GAATCTGAAT
TCATCCGTGC TGTCGCCAAT GATGGTAGAA GTTATTCAAA GGATCTGTTT ATGAAGTTCG
CTAGGACTTT GAAGAACAGA GCCATCATGA CTGAAGGAGA GGTAGCCGAG GTTATCAGCT
TTACGCAAAA AATAGAAGAC ATGAAAGCGA CAATATCAAT GGAGGACGAG AGGGAGATTC
CGGACGAGTT TTTGGATCCA TTGTTGTCGA CTTGTAAGTC AAATCTCGCT TGGCCATATC
CCATGCCTTT GCTGACGCTC GCCCTCCGTA GTAATGAAAG ATCCTGTCAT CTTACCAGTA
TCTCGAGTGA CCATTGATAG AGGCACCATT CGAACTGTCT TGCTTTCAAA GGAAGTCGAC
CCTTTCAACA ACGTGCCGTA AGTGATCATG TACCTCCTTA ATTGCGTATA GACTTGGAAG
CTAATATCTT GCATCTAGGC TGAAGTACGA GGATTGCATT CCCGACACAG AGCTAAAGGC
CAAGATCGAT GCGTGGCTGG CGGAGAGCAA CGCAAAACAA GCGGACTCGG TGATGGATGT
TGATCAGCTG TAGGAGAATG TCGTTGTAGC AAGTATACGA TAGTACTACA TTGTAAGATA
CTTAGAATTT GCATGGGAAC AGAAGAAGCA AGCAGTGTAG TACAATAGTG AACAGTGGCC
GTCAATCATC TGTGCGATGG TGCCAGTTAT TGCAAATGCT TGCACTGTGC TATGTGCTAA
GTATCTGGTC ACATGTATCG TGAATGAGTA TATG
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| Protein sequence | MSRCCRRASQ YEASPIKCLN CLLITLSPVF LPTMADNSNL SDADKIRLKR LARLGTSTPI
PSQTQPQQQP SSSSTPEPHH PPSASSRLLA NLPPAASPTS SSPAIVSPKP SASTKPDPQA
VQPKLSVTPS LSLKRPSSAS TPRDEPVGPR IVHTKPIQPL VKTEYKAWET EKVGQVFAVT
LSKQKAQETD WSLCWLKDLE QELNEENYPS PLRTDIELAD RLLIARLSMD PTLMAQSDDP
DALTILAGLP QNETVFEYLA GCWKRLYQAS RDANRYAFSE DEKSQWGKSM DKIKGLVVSY
CGMTIEDPTM FPQPAEKPLG PAEFLPLLLS VHQPSSGDLL MSTPSVPTPL SGPLQPNDLL
PFLQDLAAGF DDDTLKDVIS PTLSLFFQEW FKITPTPDIM GAEWRRYLGA MNLLVQVKHI
AAFLPTLPIW VAPNVTAPKL EWQSLLGPLT RLSVFPREFP EIWKTYFSNP TERKKEDIDA
NKSNLRFTLG SLHSSLFNVY NAIVRASPDA REGILDFFTL ALRLNEKRAG MRVDPRTVSS
DGYMTNLQVV LLKLFEPVMD ARFSKIDKVD PAYYKSSKRI DISEETKIKG AKEEADEYFG
SSMDVDTKPN FISDLFFLLN SYLHLGVVKT ISTRIRAEKN LSEIEKELKR VEASTGDWAN
NATLQAQGEA TIKKLKSDMS VLHASIHAYD TQLLDRDMIR MVVSFLSFVM TWLIRLVDPN
HQYPASPLNL PLPKEAPMAF RMLPEFFIEN IAEYFEFLAK YDPDALDDVD KDIFITFAIT
FLSPNYVNNP FLKAKLVTII SYGLYPMGYW RHGPLFDRLS ILSVATDHLM PTLIRFFIDV
EITGGHTQFW DKFNFRRDIG HIFKAMWTNP LHREAFVKSR HDDFDQFIRF VNMLMSDTTF
HLEESLTGLA KIGQIESQKA NTASWEALPQ SEREDLDGQL RQTEGSVPWH TQMGLSNVKL
IRDFTATTRE PFVAPEIVDR LAASLDENLT ALVGPKMSDL KVSNPDKYYF KPKDLLAAIA
QIYLNLSVES EFIRAVANDG RSYSKDLFMK FARTLKNRAI MTEGEVAEVI SFTQKIEDMK
ATISMEDERE IPDEFLDPLL STLMKDPVIL PVSRVTIDRG TIRTVLLSKE VDPFNNVPLK
YEDCIPDTEL KAKIDAWLAE SNAKQADSVM DVDQL
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