Gene CNL04210 details

Gene Information

• Locus tag: CNL04210
• ID: 3254941
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: +
• Start bp: 163732
• End bp: 167381
• Gene Length: 3650 bp
• Protein Length: 970 aa
• GC content: 47%
• IMG OID: 638253892
• Product: conserved hypothetical protein
• Protein accession: XP_567974
• Protein GI: 58261128
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG5309] Exo-beta-1,3-glucanase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.945618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGACCC TACAACAAGC GCAAGAGGGG GATGCCAGTA ACAATTCCGT CATGCCAGGG 
GAAGCAGAGG GAACTAATGG TGGAGCACAA GGGGACGGAG ATGCAGAAAT GTCTGAGGTG 
AGTCTTCGGC CAACGCACAC TGACATTTCC ACACCCCAGA GCAGCATCTT TGTCGACCAT 
TCCCCAGCTT CAGTGTCCAA TCCTGCTTTT CAGACATTCA TCAACAACAG TCTTTCCAGA 
GTGCAGTGCC AGATTTCAGT GTCGGACAAC GAAGATGATT CAGCAGCGCC ATCTGTTTCT 
GGAGAGCATG GCACTGAGTC AGAGGAAGAA TTAAGGGATG CGCAGTCCCA TCTAGACGTG 
GGGGGGAGAA GGGAGGATAT GGAATCATGG GATGAGCAGG CTGTCGCCAG AGAAAAGAGG 
GAAGCAGGTC CGAGATGTAA GTTCTGTTTT CATAAGGATT TCTATTCACC AACTCATTGT 
CTCATTATCC GATAGTGTAT GCAATGAGCG AAGAAGACAT TGATAAGATT GGCCTATATA 
GTTGGAAGGT CGATCACAAC ATCTCACGAG CTGCATACAA CAGTCTTCCA GACCATGCCA 
ACAATATACC GTTCATCTCC CTCAAAGAGG CACAGTCTCT AATCGACAAT TATTCAGACA 
CCCTTTGCGA TTATTATGAC ATGTGCAAGC ACTCTTGTCT TTGCTTCGCC GGCCCTTATG 
CTAAAGATCA GAAGTGCTCC AAGTGTGGTG CAGACAGATT CGACCGAAAC GGGAAACCAT 
TCCAAAGGTT TTTGTACATC AAGATTATTC CAAGGCTTCA GAAGATGTAC AACCACCCAT 
CAACAAAGGA AAGACTCATG TACCGAGACA AGAGCACCCG CGAATACGAT AACTCCAATA 
TCCAAGACAT ATTTGATGGG AGTATGTACA GAATACTCTT GGAAAAAGAG ATTGAGGTGG 
ATGGAAGAAA GCTCGGAACC AAGTACTTTG CCGATGACAG AGATATTGCT CTCTCATTCT 
CATCGGATGG GTTCTGCCCA TTTGACAATG GCTCAGGGAC GTGTTGGCCT CTGGTGCTTT 
TCAATCTCAA CCTACCACCA GAAGAAAGGG TCCATACCCG CGAGATACTG TCGGTGGGAC 
TCATCCCAGG CCCTAAAAAG CCAGAAGATT TTGATTCTTT CATCTACCCA TTAGTGGAGG 
AGCTTTTGCA ACTCACAGTT GGAGTGCATA CATGGGATGC CGATCTGGGA AGTTTTTTTA 
CACTCAGGGC ACATCTCCTT TATGTTTCAG GGGATACACC TGCTGTATCA ATGATCATGC 
ACATGAAGGG CACTGGAAGC TTCCACCCCT GTCGGATGTG CAATGCAACC TCAGTCTGAC 
ATTCCCAAAA CTGTAACCCC AACCAACTGT ACCTCCCCCT CCAATCATCT GCGACCGATC 
CGACTGTACC CGACCATGAT CCCTATAACC TACCTTGTCG CACCCATTAC CAGTTCATTC 
GCCAAGCCCG AGAGGTGGCT GCTGCATCTA GCGCAGCTGA GAAAGAAAGA CTTGGGCAGA 
AACATGGTAT CAAGGGTCTG TCCATCCTTG AAAAACTCCC CACTATCGAC TTTCCTCTTT 
CATTCCCTGT CAATGCAATG CACAACCTTT TTGAGAACAT CCTCAAACTT CAAGTTAACC 
TTTTCTCAGG GGCTGTCAAG GACTTGGCTG ATGAGGACTT TGTCCTTACT ACTCGTCAGT 
GGGCAGCTGT TGGCGAAGCA ACTGCTGCTG CCGGTGCGAC AATCCCCTCA TCATTTGCCG 
CTAGACCACC GGACTTCGTC AAGAATAGGC AGGCATGCAC AGCTGACACA TGGTCTTTTT 
GGCTGCAGTA TATTGCACCG GTTTTGCTGG ATGGATTACT TGAATCAAGG TTCTACAAGC 
ATTTTATGCG GTTTTTGAGC CTTTTCAGAG AATGCCTGGC CTATGAGATG CCGAGGGAAC 
GCCTTGCGGG TCTGAAGACA GACTGGATTA AGTGGGGTGT GGACTTTTAC CGGTGAGTTG 
CATATTCAGA TTACATTATG AACTCTTCTT AGACATTGAT TTCGTTTAGT CTCTACCATG 
AGAACAAGCC TAGCCATCTC CATGTTTGTT CGGCTCAGGT GCATTCAGTC TTTCACTTCG 
GTCTAATTAT CGAGATGATG GGGCCCATTT GGGTATCGTG GCAGTTTGCA ATGGAATGTT 
ATTGTGGTGA TCTTGGCCGA AATCTAAGGA ATATGCGACA CCCTTATGCT AGCATGTCCC 
AGCGGATTTT GGCCAAGAGT CATCTACAAC ACATTGCGAA CAAATACGAC CTTCACTGGG 
GAGGTAGAGG AAGGGTGAGC GATGATGAAG CCCCTAAGCG GTATGAGACG GTCTTGCCGT 
CATGTAAGTC CAAGTCATAT CATATAGCGC TTGATGTATA ATTGATGCCG GCTCAGATGC 
GCATTATGCT TTGTCCTCCC CGACCAATGA CGCCCAAGGC GTCATCCGAC ACAACCTGAT 
GAATAAGCTC ATCAACACGA TGACCACCCA ACACGATATC CCACCGACTG TTGAGCTTAG 
AGCTTTAGTG TCAAAGGGAA AGTTGAGGGT GTGGAACCGT GTTCGAGTGT TGAATGGTGG 
CGATTCCATT CGTGTGTCGA GGATGGATAC AGCTGAGGAG GACAGAAGGT GTGCCTCCTT 
TGTCTCGGTG AGTTAGACTC TATTTAGTCT GAAGAGAACT TTAGAAATTG ATGATGAAAT 
GTTGGTTGTA GTATATGGTG TCTATCGACT GGAATAGGCG CCATCCAACC AGGCATGTCG 
AGTTTGAGGA CCACCTATGT TATGGTGAGC TCCTGAACTT GATCACCATT GACCTCCCCC 
ATCACCCGAA ATCCTCCGAC ACCCCTCCTG TTACTCTCGC CTTCGCCCAC ATCAAACCAG 
CGGTGTCACA TAAGCACCGT ATTGGCAACC ATGAATGGAG CTATTATAAA GAGTACCAGG 
CGGAGGAGAT GGTGGATCTG GCCTCTGTCA ATGAACTGGT TGGAAGGGTT AAGAGTATCT 
CAAAACCTGG CACGACCTAT ATAATTGACA GGGGCACGCC CTACAGCCGC GTGTCTTTGG 
TGTAAGTGTA AATGGGCGGC TAAAGCGTTA GCTGGGGTTA TTGAGTGGAG GATGGGTGTG 
GCAGGCCCCG TGCAGTTGAG TGTCTGTCCT CGGTCCATCG TTCAACTGAG TCTGTCTTTG 
TGTCTAGCTT CCATCATCTT CCATCATCTT CATCTTCATC TTCATCTTCA TCTTCATCTT 
CATCTTCATC TTCATCTTCA TCTTCATCTT CATCTTCATC TTCATCTTCA TCTTCATCTT 
CATCTTCATC TTCATCTTCA TCTTCATCTT CATCTTCATC TTCATCTTCA TCTTCATCTT 
CATCTTCATC TTCATCTTCA TCTTCATCTT CACCCTTGTC ACTTATATTC CTACCTACCG 
ACTTGCTTTC CTGTAGCTAC CCACCATCCC TTCCCTGTTA CTATTTACTT TACCTCTGTC 
ACGGCCACTC TCTTCTTTCG CCTCTGTTCC GATTTACCTC AGTTTTGTCA CGGCTCTTCT 
ATATTTTTTC TTCATTTATC GTTCTCTCTT CTAGCCTCTT CTTTGTTTAG 

 

Protein sequence

MRTLQQAQEG DASNNSVMPG EAEGTNGGAQ GDGDAEMSEV SLRPTHTDIS TPQSSIFVDH 
SPASVSNPAF QTFINNSLSR VQCQISVSDN EDDSAAPSVS GEHGTESEEE LRDAQSHLDV 
GGRREDMESW DEQAVAREKR EAGPRLYAMS EEDIDKIGLY SWKVDHNISR AAYNSLPDHA 
NNIPFISLKE AQSLIDNYSD TLCDYYDMCK HSCLCFAGPY AKDQKCSKCG ADRFDRNGKP 
FQRFLYIKII PRLQKMYNHP STKERLMYRD KSTREYDNSN IQDIFDGSMY RILLEKEIEY 
FADDRDIALS FSSDGFCPFD NGSGTCWPLV LFNLNLPPEE RVHTREILSV GLIPGPKKPE 
DFDSFIYPLV EELLQLTVGV HTWDADLGSF FTLRAHLLYV SGDTPANILK LQVNLFSGAV 
KDLADEDFVL TTRQWAAVGE ATAAAGATIP SSFAARPPDF VKNRQACTAD TWSFWLQYIA 
PVLLDGLLES RFYKHFMRFL SLFRECLAYE MPRERLAGLK TDWIKWGVDF YRLYHENKPS 
HLHVCSAQVH SVFHFGLIIE MMGPIWVSWQ FAMECYCGDL GRNLRNMRHP YASMSQRILA 
KSHLQHIANK YDLHWGGRGR VSDDEAPKRY ETVLPSYAHY ALSSPTNDAQ GVIRHNLMNK 
LINTMTTQHD IPPTVELRAL VSKGKLRVWN RVRVLNGGDS IRVSRMDTAE EDRRCASFVS 
YMVSIDWNRR HPTRHVEFED HLCYGELLNL ITIDLPHHPK SSDTPPVTLA FAHIKPAVSH 
KHRIGNHEWS YYKEYQAEEM VDLASVNELV GRVKSISKPG TTYIIDRGTP YSRVSLVFHH 
LPSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS 
SSSSSPLSLI FLPTDLLSCS YPPSLPCYYL LYLCHGHSLL SPLFRFTSVL SRLFYIFSSF 
IVLSSSLFFV