| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNL04140 |
|---|
| Symbol | |
|---|
| ID | 3254787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006681 |
|---|
| Strand | + |
|---|
| Start bp | 127562 |
|---|
| End bp | 129462 |
|---|
| Gene Length | 1901 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638253887 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_567969 |
|---|
| Protein GI | 58261118 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.215775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCCAATCCCT TGATCTGCTT CACCATGTCA GACAACCAGC ATCTGCAAGG CCAATCTAGT
GTCCCAGAAA CGCCCGCAAA TACGTCAGAA GTTGATACAT CGGGCGCGCC GGCCGCAGCA
AGCAGCGTCG GGCCCGCTTC GAGCGAGGGG ACAGATCAAC AGGACCCTGT CGTGTCGACT
TCTTCTTCAA AAGTACAAGA TATACTACAG CAAAGCATCA ATCGCGACAA CTTTCAGGAA
GAAGTTGGAC AGGTGATGGG CACCATAAAC AGTTGGTGGG GGGGCGTCAA GAAACAAGTA
CGATCCCATC CTACTCAGTA GTGTCTATTG TGCTGATCAA GTCCATGTCT AGTCCGTGTC
TACTTTGGCG ACTTTAAAGG CCGATATAGA TAAAACAGTG ACCCAAGCCC AAGCTGACTT
TGAATACCTC AAGGCAGCTA AAATTGAAGT GGTACGCAAA GACGCCACTT CCGAGCCCAC
TAGAGTGTCA GCCAAGGAGG ATCAAGATAT CAGTGCAGAT ACTTTGAAAG AAGAACCGAT
AAGTGTCCAA AACGATCAGG ACAAGGGAAA AGGGAAAGAA ACGGCACAGT CATCGGCAAC
GAATCAGACG AGCCCCCCTG CTTTCTTTAC GAAACTCGCT TCTTCAACTA GTCAACTTCA
GCAATCACTC CTATCCGCTG TACAGTTTAC ACTCGATGCC ACAACTGCCA ACTCGGCACT
GTCCAATCCA AATGCCTTCC GTCAGCAACT TGTGGATAAT CTACGCCTGG CCTCCGCTCG
AGAGAACTTG CAGCTTTCAG TCAAACAAGC TGAAAAACTG GCTGAAGAAT ATCTGCGCAA
AGGAGACCAG TGGGTCAAAG GTGCTGAGAA GTGGATGGAA GAGGCTGTTA AAGTCGTACC
TCCAGAGGGA GAAGAGACTC ACGTGGTCAA CATCGGCTGG GATGGCGGAG ATTGGTACTC
CTTTTCAACT TCTGATAATA CCCCTCTGCA CATATCAACG ATTGACAATG GTGCCCCTGG
TCCCTCAGCT GCTGGTACCC AGGTCAAGGT TCTGGCCAGC TCTCGTAAGG ATGCACTTTT
GAAGCGCCTT CGAGAAGATA AGCAACTTTT GTTGGTTGAT CCTGAAGGTG AAGGGGAAAC
TGAGAAAAGG AAAGCAGAGT TCCGTGACTG GGTTAAGACA CAATGGGAAG CACAAAAGAC
AAATGGGCGA CTGGAGGATG AGGGTCTTGT GGGTCATATT AGGATGGAGC TTGGTAAGTG
ACTTCCATGT TGGGATCCCT GAGAATATGA TACTTATATA AATGTCTTCT TACCCACTAC
TCTCATCAGT GCCTGAGTAC CTCACAGATG AGCAATTCTG GCAACGTTAT CTATTCCACA
AACATATGAT TGAAGAGGAA GAGCAGAAGA GGAAACTGCT CTTGCAAAGT GAGTGAGCAG
TATTCCTGTC ATGCTCCTGT TGCTAATTTT TTTTTCTTTG GGTAGCTTCT CAACAAGACC
AGTCAGATGA TTTCAACTGG GATGATGAGC CTGAAGAAAC TACCCCCCTG GGTGATGGGC
AGGCATCCCA TGGTGTAGTC ACCCCTAAGG TCAGCCCAGT TGGCAAACTA CCTAGTTCAG
TGTTCAGTCA CTCAAAGGCA AAACTTGCTA CTTTGGACTC AACAAGCCCA CATGACTCGG
AGGAGAGCTA TGACCTAGTC AGTGATCAGG GAGGGAAGAC TGCCAGGGCT GCCCCTCCTG
TGGGAGATGA TGATTCTGAC TGGGAGTGAC AATGATTAGT TCTGCCACTT GTTATTTGTT
GTTGTATATA CTAGCCAAAC CAAGCTCATG TCAAATATTT TACAGATAGG AAAAGACTAT
GATAAAAAAA GTTTCAGATA GAACTGATCC CTTGGATGTT T
|
|---|
| Protein sequence | MSDNQHLQGQ SSVPETPANT SEVDTSGAPA AASSVGPASS EGTDQQDPVV STSSSKVQDI
LQQSINRDNF QEEVGQVMGT INSWWGGVKK QSVSTLATLK ADIDKTVTQA QADFEYLKAA
KIEVVRKDAT SEPTRVSAKE DQDISADTLK EEPISVQNDQ DKGKGKETAQ SSATNQTSPP
AFFTKLASST SQLQQSLLSA VQFTLDATTA NSALSNPNAF RQQLVDNLRL ASARENLQLS
VKQAEKLAEE YLRKGDQWVK GAEKWMEEAV KVVPPEGEET HVVNIGWDGG DWYSFSTSDN
TPLHISTIDN GAPGPSAAGT QVKVLASSRK DALLKRLRED KQLLLVDPEG EGETEKRKAE
FRDWVKTQWE AQKTNGRLED EGLVGHIRME LVPEYLTDEQ FWQRYLFHKH MIEEEEQKRK
LLLQTSQQDQ SDDFNWDDEP EETTPLGDGQ ASHGVVTPKV SPVGKLPSSV FSHSKAKLAT
LDSTSPHDSE ESYDLVSDQG GKTARAAPPV GDDDSDWE
|
|---|
| |