Gene CNL03970 details

Gene Information

• Locus tag: CNL03970
• ID: 3254818
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: -
• Start bp: 87464
• End bp: 91176
• Gene Length: 3713 bp
• Protein Length: 1013 aa
• GC content: 48%
• IMG OID: 638253869
• Product: nucleus protein, putative
• Protein accession: XP_567953
• Protein GI: 58261086

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.730253
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCAGGGATC GTAGTATGGC TATGACAGCC CTACATCCCA CAGTTTCATC TTCAGATATA 
CACCTCGACT CCCCACACAG CTATACGCAC TCCGGATCCA CCCTCCTGCC CGACCCATCC 
GCTTCCCCAT CCCCTAGTAC CTCTCACGCT CCCCTACCCG GCGCATCAGC AGGGGACATG 
CAAGCAGAAG CACCTGAATT GGTAGAAGAG GTTCCAGAAG GAGAATCGGA AGGAATGGGA 
GACCAAATCA TTCTTGATTC ACAGCCAGAG GTTGACGTTG AAGACCTTAC GGGGGAGATG 
GAATACGAGA ACTTGAGGTA TCGGACGGAG AGAGAGCGGA AACGCGTTAA GGTATGTATT 
CTTCTGTCTC TACTTACTCG TATAACAACG CTGGCCATTC TGTGTCTTGC ATAATAACTG 
ATGTTCGTGG CGTTCCAATT CAGGTGTACG AGCTTCGTGA CGAGTCATGG TTCGACCGAG 
GGACAGGCAT TTGTCGTGGG ATGATCAATG CGGATGGCCA TGCAGTCATT TTAGTGGAGG 
CTGAATCACC TCAAGTTCAG GAGAATGAAG ATGAGCCTGG AGGATTCTTG ACCAAAGATA 
TCTTGTTGAA TTCCAATGTT GAAAGGGATG ATATCTACGG CAAACAACAA GGTTTGTTTC 
CTGCAAGTAC GCGTTCCGAG TCTGACAATC TATCTGGTAG ATACTCTGAT AGTTTGGACG 
GATCCAGAAT CGAAACTTGA TATTGCTCTT TCCTTTCAGG ACGCCGATGG ATGCGAGGAT 
ACTTGGCAAT TTATATGTGA AGTTCAAAAG CACCTCATCA GCGTCGGTAC GTTTTTTTCA 
CTGAGGAAAT ATGTTACCGT TGCTAATGCT TATCTTTTGG CGGTTTGAAA GAGGATGAAA 
CGCAGGTGCC ATCATCTTCA TCGCCCATTG GTGGTTCTCC AATGATGGTT GCCAACGCGC 
ACATGGTCAA TGCCGAGCAC AAGCTACCGT GGCAGCCTCC TACGTTGGCA AACATTAGGT 
AAATCTCGTT TCTGACAGGG AAAATAAAGT TGTATTAACG GATGTACAGG GAACAAGAGT 
TTTGCATAAG AGCACAGGCC AAGTCGGCAA TGGGTCGGGA GAGAGCAATG GAGCATATCC 
TGAACGAGGC AAGTTGGATG TAATCCGCAG CAAGAATGCT CTGACGTCTT GTTGTAGGAT 
TATATCAAGC AATTGATCAA TGTTCTCGAG CAAGCGGAAG ACTTGGAAAG CTTGGATGAT 
TTGCACGCTT TATGTTCCTT GATGCAGACG ATCTGTGAGT GCCGTCGTTC TCCTGTCAAG 
GCAAAGCTGA CGTGAATCAG TATTGTTTAA CGACAATGGT ATATTCGAAT ATATTCTTCA 
GGATGATGTA TTCCTCGGTG TTATTGGAAT GCTTGAATGT GAGTTCTAAT AGCATAATTA 
TGACTAACGC GGCAGACGAT CCCGAATTCC CCGAACTCAA AGCCACCTAT CGTCAATATT 
TTCAAGAAAA CGCTCGTTTC CGAGAAGTCG TTCCCATCCC CGACCCTATT ATCTGCAACA 
AGGTCCATCA GACATACCGC CTCTTATTTC TCAAAGACGT CGTGCTTGCC CGTGTACTTG 
ATGATTCAGC ATTCAATATT CTTAATGGTT TCATCTTTTT CAACCAAGTG GATATCATCA 
ACTACATCCA ACAGAGCGAT GGCTTCCTCA CGCAATTATT CGAAGCCTTC CGTGATCCCT 
TACCTCCCCC TCCTCCTAAA GATACACCTC CAGAACCGCT CGATGATAAG AAACGTGACA 
CAGTCATGTT CCTCCATCAA CTTGTCATGA TGGGCAAGTC AATTCAACTT CCTCCACGTT 
TACAACTCTA TCGGACCCTG GTCGACCGCG GACTTTTACG CGTTATCGAA TGGTCTTTCC 
GCCGTCCTGA AGCAAAGATT TTACATGCGG GTGCGGAGAT GTTGACCCTT GTGGTGGAGC 
ATGATGCGTC GTCGGTGAGA AGTTATGTTT TCAAGGAGCA GGAGCAGAAG GAGCGGACGT 
TGGTGAAGGA GATTATTGAG TTATTGCACA AAACGACGAA TGCGGGGTTA ATGGGACAGA 
TGGCGGATAC GCTGAAGACG ATGTTGGAGG TTCCCCCGGA TAATGAGGTT TGTCGATCAT 
CTTTCCGTAA GGTTGATTAG GAAATGGCAT TGACACAGCT ATAGTCATTC ATGGCGAAGA 
AGGAAGGGCC TCTGGCGGAA CAGTTCATGA CTCATTTCTA TGAGACTTGG GCTACGTATC 
TCTTCAAACC GTTATTGGAT ATCCCAGATT ACAAAACTGA ACAGCCCACG AGTATATCAC 
TGTTATTTGG AAATCAAAGT CTCAGCTGAC GGGACGTATA GCAAAATTAA CTAGAGAGTA 
TACTTCGCTT CTTCAAAATC TCGTTGAACT CTTATCGTAC TGTCTTCTGA ATCACCCTCA 
TAAAGGCTCG TACTTTATAT TGTCAAATCC GATATCGAAA AAGGTCGTCG CATTATTGTA 
CATTCGGGAT AAGCCTTTGA GACATGGTTC GTTTTTCTTC TTCTGAAGTG TTCAGAGTGG 
GCATTGACTT GTTATTGAAA ATTTAGCCGC TCTGCGTTTC CTCAAGGCTT GTCTGAGAAC 
GCCCAATCAC TTTATTCATC GACATTTTGT CAAGAACGAT CTGTTAGGAC CTCTTTTGAT 
GTTACTGGAG GAGGAGAGTT TAAGGGATAA TATGATGAGT TCTGCCTGTA TGGAAGTCGT 
CGAGCAGATC CGCAAGGTAA ATAAATCGTC CGTTGTATAG CCCTTGTCAA GCTTATACGT 
GATACAGGAC AATTTGAAGA CTGTCATCAA CTATCTCTTT GAAAACTATA CACCCCGTCT 
CGAAGCACTT TCGCGTCGGC CGCTCATGCG GGGTATCATG ATGGGAATTC GATCACGCTG 
GGAGATGAAC AACGAGCCTA CACCAAGCAT GCCCCTCGTC GCTGCTACAT CAGCTACATC 
GATCGGCGGA GAAGACGGCT GGGTGAACGA GGAGAAGAAG GAGGATGATT ACTTTAACGG 
ATCGGACGAT GAAACGGATA GGACGGTGGT CGACGATACG GAGAATGTGA TAGGGGAAGA 
AGAAGGAGAG GAAGGAGCCG TGCCTGCAAA GAGGAAGAGG CTGCAAAGTG GCGGTGGACC 
GAAAAAACGG GCCCAGCGAA CGGGCAGTGC GCTCGGATTG GATTATGACG ATAATTCAGA 
CCCAGAATCA CCAGTCTCCA CACCACAACA TACCGAACAC TCTTCTTCTT CCACCCCTGT 
GTTAACCACC ACGACATCTC TCCTTGAACG AACAGTCTCT AGAGCGCAGG CAGTCGCCGA 
AAAGGAGAAG AACACATCAG AGCTGGAAGA AGATCTGGGA GACGTGCAGG CTAAAATGCG 
GGAAAAGCGA CGTCGGGAGG AAGAGGAAGA AGAGGAAGGC GGGTTTGCGG GGTTGTTGGT 
TGGTGCCAAG CCGCAGCCGG TAGCGACTGT CGCCGCAAGT GCAGCGAGTG GAGGCGGGGC 
GATAGGAGCA GGAAAGGGCG AAGAGGGAAA GGACGATGAG CGAGATACGG CTATGCAGAG 
TGAGGTGTCT ACGACGGGGG AAGGAAAGAA GGGGTTGAAG GATATGGGCA AAAAGATACG 
GCTGAATTTT GGGCTGGGTA AGAAGTTTAG CAAGTAGGTA ATTGTGCATG TAA 

 

Protein sequence

MAMTALHPTV SSSDIHLDSP HSYTHSGSTL LPDPSASPSP STSHAPLPGA SAGDMQAEAP 
ELVEEVPEGE SEGMGDQIIL DSQPEVDVED LTGEMEYENL RYRTERERKR VKVYELRDES 
WFDRGTGICR GMINADGHAV ILVEAESPQV QENEDEPGGF LTKDILLNSN VERDDIYGKQ 
QDTLIVWTDP ESKLDIALSF QDADGCEDTW QFICEVQKHL ISVEDETQVP SSSSPIGGSP 
MMVANAHMVN AEHKLPWQPP TLANIREQEF CIRAQAKSAM GRERAMEHIL NEATEDLESL 
DDLHALCSLM QTILLFNDNG IFEYILQDDV FLGVIGMLEY DPEFPELKAT YRQYFQENAR 
FREVVPIPDP IICNKVHQTY RLLFLKDVVL ARVLDDSAFN ILNGFIFFNQ VDIINYIQQS 
DGFLTQLFEA FRDPLPPPPP KDTPPEPLDD KKRDTVMFLH QLVMMGKSIQ LPPRLQLYRT 
LVDRGLLRVI EWSFRRPEAK ILHAGAEMLT LVVEHDASSV RSYVFKEQEQ KERTLVKEII 
ELLHKTTNAG LMGQMADTLK TMLEVPPDNE SFMAKKEGPL AEQFMTHFYE TWATYLFKPL 
LDIPDYKTEQ PTTKLTREYT SLLQNLVELL SYCLLNHPHK GSYFILSNPI SKKVVALLYI 
RDKPLRHAAL RFLKACLRTP NHFIHRHFVK NDLLGPLLML LEEESLRDNM MSSACMEVVE 
QIRKDNLKTV INYLFENYTP RLEALSRRPL MRGIMMGIRS RWEMNNEPTP SMPLVAATSA 
TSIGGEDGWV NEEKKEDDYF NGSDDETDRT VVDDTENVIG EEEGEEGAVP AKRKRLQSGG 
GPKKRAQRTG SALGLDYDDN SDPESPVSTP QHTEHSSSST PVLTTTTSLL ERTVSRAQAV 
AEKEKNTSEL EEDLGDVQAK MREKRRREEE EEEEGGFAGL LVGAKPQPVA TVAASAASGG 
GAIGAGKGEE GKDDERDTAM QSEVSTTGEG KKGLKDMGKK IRLNFGLGKK FSK