Gene CNL03960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL03960 
Symbol 
ID3254806 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand- 
Start bp85905 
End bp87112 
Gene Length1208 bp 
Protein Length255 aa 
Translation table 
GC content54% 
IMG OID638253868 
Productconserved hypothetical protein 
Protein accessionXP_568209 
Protein GI58261598 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.139278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTTATATTC CTTCAGTCAG TCGCACTTTT CCCATCCCCA GCTCACACTG ACACCACAGC 
AGAAATGGGT CGAGTCATCC GCGCGCAGCG AAAGTCCGGG GGTATCTTCA AGTCCCACAC 
CCACCACAAC AAGAACCCCG CTAGGTTGAG GAACCTCGAC TTTGCCGAGA AGAACGGTTA 
CATCAGGGGT GTTGTCAAGG ACATCATCCA CGACGCTGGG CGGTGAGTTG GGTTCTGTTT 
AATGGACTGT ATCGGGGAGT TTGGAACATA AGAGAGGAAG AATATTGGAG GCACAAATAT 
GTGAATGAGC GGAAGGACGA AGGTGGACAG GAAGCAGGGC TGCAAGGGTC TGAGAAAACT 
GGGGAGAAAC AGGCGCTGAT TCCAAACAGA GGTGCTCCCC TTGCTACCGT TGTCTTCCGT 
GACCCTTACC GATACAAGCT CCGAAAGGAG ACTTTCCTCG CTGCTGAGGG TCTCTCCACC 
GGTTCTTTCG TCTACTGCGG TAAGAAGGCT ACCCTCAACG TCGGCAACGT CCTCCCCATC 
GGCCAGTGCC CCGAAGGTAC CATTGTCTGC AACGTCGAGG AGAAGATTGG CGACCGAGGA 
GCGCTTGCCC GAACCTCTGG TAACTACGCC ACCATCATCG GCCACAGTGA GAGTGGTGTG 
ACCCGAATCA GGTTGCCCTC TGGCTCCAAG AAGACTGTCT CTTCCCGATG CAGGGCTACC 
GTCGGTATCA TCGCTGGTGG TGGTAGGATT GACAAGCCCT TCCTCAAGGC TGGTAGGAAG 
TACCACGCTA TGCGTGCTAA GAGGAACTCT TGGCCCCGAA CTCGTGGTGT GGCTATGAAC 
CCCGTCGACC ACCCTCACGG TGGTGGTAAC CACCAGGCAA GTAGTGTTTT TAATGTTTGG 
ATTACGTTGT CTGACAGCTT TTGTTTAGCA CATTGGTCAC GCCTCTACCA TGGCTCGCGA 
CGCTCCCGCC GGTCAAAAAG CCGGTCTCAT TGCTGCCAGG AGGACTGGTC TTCTCGTAAG 
TCTGCATTGT AACAAGGCAT TGGATGCATC TGACGCAGTC AATTACAGAG GGGTACCCAG 
GGCAAGAACG TCGACAACGC TTAAGCGACT GGTTAGTTGT GCAGTGGAGT CGGAGTGGGG 
ATGGGATGTT GGGCAGTGGG CCCGTGGATG GGCGAGGCTT TGTACCTCTT CTATGCAGAT 
TCTTTCGA
 
Protein sequence
MGRVIRAQRK SGGIFKSHTH HNKNPARLRN LDFAEKNGYI RGVVKDIIHD AGRGAPLATV 
VFRDPYRYKL RKETFLAAEG LSTGSFVYCG KKATLNVGNV LPIGQCPEGT IVCNVEEKIG 
DRGALARTSG NYATIIGHSE SGVTRIRLPS GSKKTVSSRC RATVGIIAGG GRIDKPFLKA 
GRKYHAMRAK RNSWPRTRGV AMNPVDHPHG GGNHQHIGHA STMARDAPAG QKAGLIAARR 
TGLLRGTQGK NVDNA