Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNL03940 |
Symbol | |
ID | 3254900 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006681 |
Strand | - |
Start bp | 80159 |
End bp | 81665 |
Gene Length | 1507 bp |
Protein Length | 458 aa |
Translation table | |
GC content | 65% |
IMG OID | 638253866 |
Product | hypothetical protein |
Protein accession | XP_567952 |
Protein GI | 58261084 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.414601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTCGTCGGC AAAACACATT TTCTTCGTCG CAAAGCACCA AAAAAGCGCA ACAAACGATG GCTGACCTGA CACCCGGCGC ACGCAAACCC GCGCCAGCAG AGCTTACAGG CTTCCGCTCA GCCCTCGCGC ACACCGGTAT CCCGCACGGC GTGCTTCTGT GGAAACCCCG TCTTCCCTCA CGCAACTGGC TCGTCTTCTG GTCCGTCTCC CTGTCGCTCT CGTACGCCTA CTACTACGAC CGCGCGGAAT GCAAGCGGAT CAAGCAAGAG GTGGTGGAGC GTGTGGAGAA GTACGGGCGG GAGCCGATGC CTGGTGGGAG TCTCGGTGAG CCGAGGCGGG TCGTGGTCTG GGCTGGGAGG TGGGGAGGGG ACGACGATGC CGACCGAGCT GGGCGGTATT TCCGCAAGTA TGTCAAGGTG AGTGCTGTGT GGCCGTGCTT GGGAAGGGGA AAAGAAGGCG CTGAACGATC TCTCGCGCAG CCTTACCTCG TCGCTGCCGG CATAGACTAC ACGCTGCCGT CTGTCCCTCT GCACGGCTCG ATAACCCGCC AGCTGCACGC CGCGATCCTG CTGCAGCGCC GCCAAGCACT CGGCCTCGCG CCCACCGCGA CGCCGCTCTC TCTCCCCGGC GTGCTGGACC CGGCAGAGGC GAAGCGGCGG GAGGTGGAGA GCGGCGTGGT GGTCGTCGGG CGGGCGAGCC TGAAGGAGTA CCTGGAGGGG CTGCGGAGGG GCTGGGAGTG CGGCGTGGAC GAGTGGGCGT GGGAGACGGA GGTGGAGAAG ACGTTGGCGG GCGACGGGGT GTTTGAGTCA GTCGAGTCGC CCGTCGAGCC CGCCGTCGAG ACCGCCGAGA CCGTCGTCGA GCCCACCGCC GACGCCGTCC CCAAATCCAA CTTTGGCTTC CTCGCCCGCC CCGCGCCCGT CACCCCCGGC GCTCCCGCCA TCCCCGCCCA CCTCCACACC CCGCCCTCCC CGCTCCCGCC CACTCCCCCC CTCCTCCTCC TCCCGTTCAC GAACCACCTC GGCTTCCTCC AGCTGCCGTA CATGATCCTC GACTTCTTCA ACGAACGCGC CAAAGTGCGG CAAGGCGCAC AGTCTGCGCT CGCCCTCATC GAGGGCCCCA CCAGGGACAT GCACAGGGAG GACGCAGAGC ACTGGGAAGA GAAGAGCGAG AGCTGGTACA ACAAGACGGC CAGGCAGCTG CCCGAGCGGC TCCAAAAGTC GCGGACAGAG TACTACGAGG CGATCAAGTC CCGTATCGAC CTGGCGAGGG CGTACGAGAA TGGCGACCGC GAGATGACCG AGGAGGAGAA AAAGGCCAAC AAGGTGGAGC GGATCCAGGA TATCCAGGCG GAGAGGCTGA AAAAGGAGCT CAGGTGGAAG GGCAGCGAGG AAGGATGGGA GATTGTCAAG CCAGAGACAC CTGCGACATG GAGAGATCGC TGGGAGGGCT GGCTCAAGGT GTACCAGGTG CCCGAGGATG CGCAAAAGGG CTTGTAGACG CTCCGAC
|
Protein sequence | MADLTPGARK PAPAELTGFR SALAHTGIPH GVLLWKPRLP SRNWLVFWSV SLSLSYAYYY DRAECKRIKQ EVVERVEKYG REPMPGGSLG EPRRVVVWAG RWGGDDDADR AGRYFRKYVK PYLVAAGIDY TLPSVPLHGS ITRQLHAAIL LQRRQALGLA PTATPLSLPG VLDPAEAKRR EVESGVVVVG RASLKEYLEG LRRGWECGVD EWAWETEVEK TLAGDGVFES VESPVEPAVE TAETVVEPTA DAVPKSNFGF LARPAPVTPG APAIPAHLHT PPSPLPPTPP LLLLPFTNHL GFLQLPYMIL DFFNERAKVR QGAQSALALI EGPTRDMHRE DAEHWEEKSE SWYNKTARQL PERLQKSRTE YYEAIKSRID LARAYENGDR EMTEEEKKAN KVERIQDIQA ERLKKELRWK GSEEGWEIVK PETPATWRDR WEGWLKVYQV PEDAQKGL
|
| |