Gene CNL03890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNL03890 
Symbol 
ID3254791 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006681 
Strand- 
Start bp65003 
End bp65673 
Gene Length671 bp 
Protein Length131 aa 
Translation table 
GC content45% 
IMG OID638253861 
ProductU6 snRNA binding protein, putative 
Protein accessionXP_568205 
Protein GI58261590 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.556967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAA GAGTGAGTAG CTATTCTCAA ATATATAGGC GACAATTGTC GACTTTCCCG 
ACTTTCCGAG GAAGAGCACA GCGTGAATGA GCCTTAACTG ATACTTTGGT CTTTAGGGTG 
GCCGAGGCGG AGCTCGTGGT GGTGGTAACC AAGGAGGTGA ACGCAAGAAG CGAGAATCAA 
TTCTCAACTT GGCTCAGTTT GTCGACAAGA GTATCAGAGT TAAATTTATG GGTGGACGAG 
AAGGTGAGTC ATAATCTTCA CCAAGAGGGA ATTGTGGAAA ATAGAATGGC GGGGCTGTGG 
GCCGCTCAAT GATTTTCTGG GAAATGCTGA GGGGTGTAAT TAATATGGTG GATTCGTAGC 
TACTGGTATC TTGAAAGGCT ATGACCAACT TATGAACTTG GTCATGGATG ATGTAGTTGA 
GGAGTATGAG GGTGAGTGGA CATATCTATG ATGTGTGAAC GCCTTGCTGA GTGAAACGCT 
GTCTAGATGG CCGACCTACA CGAAGTCTTG GATTAGTCGT TCTCCGTGGC CCCAATATTG 
TCCTTGTTAG CCCAACGGAC GGATCATCAG GCAAGTCGTT TCTTAAATCC ATCCGAAACG 
GCCAAAGCAA AAGTGTTAAC ATGCGACAAT CATTTAGAAA TCGAAAACCC TTTCCAACAG 
TAATAATGTA G
 
Protein sequence
MSSRGGRGGA RGGGNQGGER KKRESILNLA QFVDKSIRVK FMGGREATGI LKGYDQLMNL 
VMDDVVEEYE DGRPTRSLGL VVLRGPNIVL VSPTDGSSGK SFLKSIRNGQ SKSVNMRQSF 
RNRKPFPTVI M