Gene CNL03730 details

Gene Information

• Locus tag: CNL03730
• ID: 3254851
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: -
• Start bp: 18819
• End bp: 20843
• Gene Length: 2025 bp
• Protein Length: 588 aa
• GC content: 53%
• IMG OID: 638253843
• Product: glucose-methanol-choline (GMC) oxidoreductase, putative
• Protein accession: XP_567934
• Protein GI: 58261048
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2303] Choline dehydrogenase and related flavoproteins

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCTTTGCAC TTATACACTA TTATTCATCA GCAATATGGT TCACGCTGCT ACTCATCCCA 
AAGATGCTCC CAAAAACTTT GATTTCATCG TTCTTGGAGG TGGTGCCGGT GGTTGTACCG 
TTGCCGGCCG TCTTGCCGAG AACCCAAACG TGTCTGTACT TCTTGTCGAG GCCGGTGTGA 
AGTGAGTTTT CCCTTTCGTC CTAGCATTAG CATCCAGACT TACAGTAACC AGCAACCCTT 
CCGAGATCAC CGACATCACC ACCCCGGCGA AGGCCATGGG TCTGCGAAAC TCTCAGTACG 
ACTGGAAGTA CAAGACGACC ATGATAGACC GACCAGACTA TACTCGTATC GAGAAGCCTA 
ACACCCGTGG AAAGGTGTTG GGCGGCAGTA CTGCGCTCAA CTATTATACC TGGGTTCGAG 
GTTCGGCCGC AACCTTCAAC GACTGGGAGG AGTTTGGTGG TTCCACTTGG AACTGGGAAA 
ACACCAAGGA ATACTTCAAC AAGTCGACCA CTTACCACGA CGACCTTGGT CTCTTCCCTG 
ACGACATTAA AAGCATCGGC AACAAGGGTG GTCCCGTCGA CATTTCTCAC TCTGATTTGG 
TCCCCGAGCT GAAGCCTTGG CGTGATGCCC TCGAAAGAGC GTGGGTGAGC AAGGGTCATG 
AGTTGACCGT GGACGTCTAC AATGGTGTCC AGAAGGGTCT CTTCAAGTGT GTCAACTCGA 
TCTACAAGGG TGTCCGATCT ACTGCGGCTG CGTTCCTTGA GGGCAAGCCC AACATCACCT 
TGGCCTCTTC GACCATCTCC AAGAAGATTA TTTTTGAGGG CAAGACTGCC GTCGGTGTCA 
CCGTTATTGG GCCCGACGAC CGCGAGTACG ATTTCTACGC CAACCGTGAG GTTATCGTTG 
CTCAGGGTGT TTACGAATCC GCCAAGATCC TCATGCTGTC CGGTATCGGT ATCAAGTCCG 
ACCTCGAGGC TCTCAGCATC CAATGCGTTG TTGACTCAAA GCATGTCGGC CAGAACCTTC 
AGGACCACCC TATCCTGTCC CATGTCTTCA AGATTAAGGA CGGTTTTGGC CTCGATAATC 
ACCTCCTTCG CGCGGGTGCG GAGCACGATG GTGCCATTTC GTCCTACAGG AAGAATCACA 
ATGGACCCCT CAGTTCGGGT CTACTGGAGC TCGTCGCCTT CCCTCGTATT GACAATCGTC 
TGGAGAACCA CAAGCAGTAT CGCGATTATA AGGCGCAGAA CGGTGGCAAG GACCCTTTCG 
GTCCCGACGG CCAGCCGCAC TTTGAGATCG ACTTTGTCGT AAGCCTGCCT TTGCGTATAC 
ACAGCGATTC GCGGAACGAA AGCTGACCCC AACGTGACAG CCGATGTTCG CCGATGCCTT 
CCAATGGCAC TTCCCCACTC CGCCCACTGG TGATTACATG ACCGTCATTG TTGACTTGAT 
GCGTCCCATC TCGCAAAACG GTGTGGTAAA ACTCACCTCG ACCGACCCCT TCGAGCAGCC 
TTACATCAAC CTCAACTTCT TCTCGCACGA CCTTGACCTC ATCGCCCTTC GGGAAGGTGT 
CCGCTTTGTT GACGATATTC TCATAAACGG CGAGGGCATG AAGGACATTG TTGAGGGCGA 
CTACCCCTGG CCGATGCCCC GAAATTCAGA CGAGGGCATG ATCCGACAGA TCCTGGAAAG 
GTCGCAGACC GGTTTCCATC CCTGCGGAAC TGCTCGTATC AGCAAGGACA TCGACCACGG 
TGTCGTCAGC CCCGAGCTCT CGGTCCACGG CGTCAAGAAC CTCCGTGTTG CTGACGCCTC 
AGTCTTCCCT CTTATCCCCG ATTGCCGTAT CCAGAACGTT GTGTACATGG TCGGTGAGAA 
GGCTGCTGAT TTCATCAAGG CCGCGCACCC GGACCTTTAC AAAGAGGCAA AGTAAATGTT 
GCGTGATGTC GAAAGGACGA TCATTGCGAA GCTGTAGAAT ACGGAAGATG TAGACTCGGT 
TAGGTATGGA ATTTGAAATG GGACTTGTTA GAAGGATGCA AATCG 

 

Protein sequence

MVHAATHPKD APKNFDFIVL GGGAGGCTVA GRLAENPNVS VLLVEAGVNN PSEITDITTP 
AKAMGLRNSQ YDWKYKTTMI DRPDYTRIEK PNTRGKVLGG STALNYYTWV RGSAATFNDW 
EEFGGSTWNW ENTKEYFNKS TTYHDDLGLF PDDIKSIGNK GGPVDISHSD LVPELKPWRD 
ALERAWVSKG HELTVDVYNG VQKGLFKCVN SIYKGVRSTA AAFLEGKPNI TLASSTISKK 
IIFEGKTAVG VTVIGPDDRE YDFYANREVI VAQGVYESAK ILMLSGIGIK SDLEALSIQC 
VVDSKHVGQN LQDHPILSHV FKIKDGFGLD NHLLRAGAEH DGAISSYRKN HNGPLSSGLL 
ELVAFPRIDN RLENHKQYRD YKAQNGGKDP FGPDGQPHFE IDFVPMFADA FQWHFPTPPT 
GDYMTVIVDL MRPISQNGVV KLTSTDPFEQ PYINLNFFSH DLDLIALREG VRFVDDILIN 
GEGMKDIVEG DYPWPMPRNS DEGMIRQILE RSQTGFHPCG TARISKDIDH GVVSPELSVH 
GVKNLRVADA SVFPLIPDCR IQNVVYMVGE KAADFIKAAH PDLYKEAK