Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK03200 |
Symbol | |
ID | 3254699 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 951984 |
End bp | 958523 |
Gene Length | 6540 bp |
Protein Length | 1871 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253811 |
Product | bacteriophytochrome histidine kinase, putative |
Protein accession | XP_567913 |
Protein GI | 58261006 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.796961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAGACTCTC TTCCAGAGTA AAGTAAATCC CTTTTAGTCA ACGCACTCCA CTTCTTATAC CCAAGGTTTA ACTCATCGCT AGGCACAACG CATCCAAGTG GACCAGTCAC AAAAAACGCT AGCATAGGAG CCCGCGATCG ACGTCGTGCA GCGACGCCGT GTGGTCCCCT TCAAACACAT CCGCGTGCGT CTCCTTACAT CCAGTAGCAT GTAACAATGG TCGCTGACCT GTTTCTGTTG CGTACTGCAG ATCAACAATG CCTGACGGTT CCACATCTCC CCGCGAACCG GCCAACTCAG CCTACTCTAC CCACGAACCA CAATCCAAGC GTCATTCATC TCCTCAATCA GTAGCGATGC CCGCAGCCCC CCGCTTCCAT CGCCAACATA CCTCTAGTCA AGACCATGGG TCTAGCAGCA CCCCCATTTC ACCGGCGGCG TCGTCGACTG GGCCACTCAG TCCCAGCATT CCACCTGGAA GCTTCGTTTT TCCTATCCGA TCCGTGTTTC AGGGCATGGT CCATTCTGAC TCATCAAACG GCATAACAGA AGGTCATCAG CAACGGAAAA AGGATGGCTT GCAGCGCTCA TCCGGCAGCT CAAGCCCATT ACGGTCGCCG GCATTGTCCG ATGCTCACCG CTTTTCCACA GATGCGGCCG GGGCTTTGCA TGATGAGCCA GATGCCGGTA TTCAAACGAT TGCTCAAATG TTACAGCAGG ATGGGAGTGC TCCGCTTAAA GAAAAAGGCA AACATCAGCC AGGCGTGGCG ACTTTCGTGG GTAAGGCTGA AAGAGACCGT AACGGGTCAG GTGGAGGAGA GACTTTAAAG CCTTCTTCGC CTGATGCGTC CGGTCACCTA GGAAATTCTC CAATCACGCA TTCCAGCAGT GATTCCGAAC ACCAGAAACA ACAAGATGTC GCGAAGTCTT CTCGTTCTGA GGAAGGAACA AATGATAGTC CCGAGTCGTC GCATGGTAGC GGTGGAACTC TAAAACAAGC AACACGAACA GATCTGCCCG CAGCGCTGCA GCGGTCTTCA ACCGTCAAGG GCAAGGTTTC GGCGTCTGGC CTCACGAAAA CCTCCCCTTC AAACTATCGT CACTTCCCCT CAGAACACCA TTCTGGTCAG CGTGAACGGC GATTCTCAAC CGTTAACAAA GTCAACCCAC CTTCACGTAA TTCATCCTCC CATCCAGTTG ATGCATCTCA TCCACCAAAT CCTGAACTGC AACATCCTGT ACCTCGACGT AACACTCGGC AGCAGCATAC CCAAGACGCA GAAGGGAATA ATCGTACCAG CAGTCATGGT TCTAGGACTT CACTCGAGGT TGACGAGTCT GGTATGCGAT CACTTATCAG TGATATGAGT GGCATCGTTC TTCTTGGTGA AGCGGGATCA TGGGGTTCCA TGGGTGGTTC TGGAGTTTCT GGATCCAAGG GTACTGATGG CGGTACCGGG ACGACAGGAA CGGTCGATAG CGCGTCGATA GATAGTGGGC ATGCGACTGG TGGTCGTGGA CAAGGTGATG AAAGGCAAGT AACAAAAGCG AGTCTAGCCG CGAAGCATGG TGCAAGGCAG ACAAGTCGAC AGGATTCTGT GCGGAGCTTC ATTCAATCAC AGGCGGGTAC GACAAACCTG CAGGACCCCA ATGCTCCCAC TCTATCGCCT ATGCCAAGTG GTTCCCCTCC CGCGGAAGGT AGCCAGGATG CAACTGTCTC TATGGAGGAT AGTGCAAATA ACGAGAAGCA ACGAGAGCAG CAACAGGAAG AGGGAGAAGC AGAGCAACAG GGAGAAGAGG AGAATGGACA GGTGGAACAG CCCGTCGCCG CTTCTGCGGA GGATGCGGAA AATCCTGATG AACCTGCTGT CACCATGCGT TTTGAGCATG TCGTCACTGA AGAGGGACAT CACATCGTCG CTGGGCGAGA GGGCAGGTTG AGGAGATGTC AGGATGAGCC GATCACGACG CCAGGTGCTG TGCAAGGGTT TGGTGTGTTA ATGGTTTTAG AAGAGGATTA TGAGACGGGT AACCTCGAGA TCCGTCAGGT TTCTGAGGTA AACATCTTTG TTATAGTCAT GTCGAAATGT ACGCTCAGCG CTAACGGTGA ACTGCAGAAT TCAACCGAGA TACTAGGTCT ATCGCCCAAG TATCTGTTCA GACTTGATTG CTTTACCCGA TTATTATCAT CAGACCAGGA GACTATTCTT CGCGACACTC TTGAATACCT GCCCGAAAGC TATGGTGGAT CAAACAGCGT TGAAGATAGC GGTCCCTCAG TATTCCTGCT ATCTGGATTT GGTGAACCAG GGAGCGGTGT TGAAGAAGGT GAGACCGAAG GCGGACCCGA GACTGAAGTG AGATCTACTG CGTCAAGCGC TGGCGGCAAG AGAAAAGAAT GGACTTGCTG GGTTGCGGCG CATAGGCCAG AGCACCGAGG CTGGAACAAG GTCAACGAAA TAGGAGAACC AATCCCACCT CCAGATTGGA TCATCCTTGA ATTTGAACTC GAGCGAGACG TCTACAACCC CCTCGTTCAC CCTTCTGAGA ACGCCGAAAC TTCTACAGCC GCTGCGAACT CTAATGCCCG ATCGCTCCGT CCTGACTCTA CAGCAGCTTC CGTCTCTGCA TCCGGCTCCA ATTCCAACAG TAACACTCTT AGCGCAAGTA CTCGGTCCGG TGAGCGTACA CTCGACAGTC TTACAAGCAC TCTTGCAGGA GGCAGAGCTG GCGTCTCCGC TGGATTAGGC CCTGGCACAG CGAGCTCTGA TGCATCTCCT GGAGATTTGG GTTCATCGGC CAGTGACTTT ACTAGCGTTC CAAAACAAGA AGCGCGTATG GGTCTCGATG GGCTCGAAAT GCACATCCCG CTGGAAAAGA TTTTGGAAAG TACTACCAAC CATGCCAGCC CTCTTCGTGC ATTGGAGAGA ATGAGAGGTA CAACTGTTAA TGCGTCAAAT GAAGCGCGAT CGCGGGGACG AGGTCGAGGG CGAGGGCGAG GTGGAAGACA AAGACCTATC AGGACGGAGA GTGGTGGGAC GGGCACAATG GATATCTTTG CCGTACTCGG CCAGATCAAC GATCAACTTG TTGCCGCTCC CGACCTCGAC ACTTTTCTCA AAGTTGCCGT TGGTCTTATG CAAGATATTT GCCGCTTCCA TCGTGTTCTC ATCTACCAAT TCGACGAGCA GATGAACGGC TTGGTCGTGT CAGAGCTTGT AGAATGGGGA AAGACGACGG ACCTGTACAT GGGTTTAAGG TTTCCGGCCA CAGATATCCC ACCTCAGGCG AGAGAGTTGT ACAAGATCAA CAAGGTTAGG ATGCTGTATG ATAGGAGTCA AACTACAGCG AGGATGGTTT TGAGGAACAA GGAGGATTTG GATCAGCCGT TGGACATGAC ACATTGTTAT TTGCGAGCTA TGAGTCCGAT CCACTTGAAG TGTGAGTGAC TGGTATTAAG TGGGCATTCA GGTGCTAATG ATATCAGACC TCGGAAACAT GAGCGTACGA TCCTCCATGT CAATCTCCAT CATGGCATTT GGTCAGCTCT GGGGTCTGAT CGCCTGTCAT TCATATGGTC AACATGGCAT GCGAGTGTCT TTTCCTGTCA GGCAGATGCT TCGTCTCCTT TCCGACTCTA TCTCGAGAAA CATTGAAAGG TTGAGTTATG CTCAGAGACT GCACACTAGA AAGCTTGTGA GTTCATTTGT GGTCATTGAA GTAATCCTTG CTGATGACTC GTAGATCTCT ACTATCCCCG ACCGGTCCCA TCCTACGGGT TATATCATCT CCGACGCAGG TGACTTATTG CAGATCTTTG GGGCTGATGC AGGTTTGTTG GTCATTGGTG ACGGGTGCAA GCTCCTTGGG CAGTGAGTCA AATGCGTTCG AACACATGAC TGGGCACTCA TTGTAGTAGT AACGAGCAAG GTCAAGCGAT GCTGGCTATT GCCGAATACC TGCGTATCAA GCGATTCGAG TAAGTTTCAA ATGTTCCGAA GAAAATAGGC AGTACTAATG TCACCCAGCA ACCTCAACGC ATCTTCTTCT ATCCAACGCG ATTTTCCTGA CCTTGTCCTC CCTCGAGCTT CTGACACCAT TGCCGGTCTC CTCTACGTTC CTCTCACCGC CAAAGCTGGA CAAGATTTCA TTGTTTTCCT GCGCAAAGGC CAAGTCCGAG AGGTTCAGTG GGCTGGTAAA CCTTACAAGG ATGACAAGGC TAGTGAAGAG GCGAGTCTTG AGCCGCGGAA GTCATTCAAG GCTTGGACGG AAACGGTCAC TGGCTGCAGT CGAGCATGGA CAGACCATCA GCTAGAGAGT GCCGGGGTAC TCGCGTTGAT CTACGGAAAG TTCATTCAAG TTTGGCGAGA AAAGCAAACA GCCATGGCCT CCAACCAGCT TACGGCGATC TTGCTCTCCA ATACAAGTCA TGCTGTACGA ACTCCTCTCA GTCAGATCAT CAACACGCTC GAGTTGGCTT TGGCTGGGAA TATTGATGAC GATGTACGTA AGATGTTGGA AAACAGTCAC CAAGCCTCAA GAGCATTGTT GTTCCACGTT CATGATTTGC TCGATTTGAC TCGTATAGAG ACAGGCAACG AGACCGCTTT TAACGACCCC TTTGACATCC GGCAATCCAT TTCCGACGCT GTTCGATTAT ACCAAACAGA AGTTGCCCGA CGAGGGCTTG AATTTCGTGT CAACATGGCC GAAGATCTCC CTCAGTATGT CGTTGGTGAC TCTCGCAAAA TCAAGACCGT CATTTCCAAC TTGGTTGCCA ACTCTGTCAA GTTTACTGAA AAAGGATTCA TCGAGGTGTA TTGTGGTATT CAACGACCTT TTGATGGAGA GTCTAGCCAG ACGAGTCTCA CGGAGTCTAA GGAAGGGAAC ACAATTACGA TCGAGATCGT AATCAGCGAC TCTGGTTGTG GTATACCTAC AGTTCAGTTA GAGGAGATGT TTTTCACTCT CGAAGGTGCT GAACCTTTGC AGAAGAACAC TGGCGTCGGC CTTGGTCTTG CAGTCGTAGC GCGTATTGTG GAGCAACTCG AGGGTCAACT CCGTGCTGAG TCAGAGGTTG GCGTTGGAAC CAGGTTCTAC TTCAACGTTC CTATGGTCGC ACACCCAAGC GGAAGGCCAG GTTCACGCCA ATCCTCTCAC AATTCTCGTA ACACCAATTC GAGTCAGTTG CGAACTCGTA CAGGGAGCTC TGGTTCCAAG TCCGACTCAG TTGTGTCTCT TCGTTCCGAT GGTTCTGGGG TACCTGAAAT TGAATCCTTC GTTCAAGACT TTGGCGGTAG TCATTTACCT GCACCAGTGG GTGATGATGA CCCGCGGTTG TTGGAGGCCC AAGAGAGGAT GAGTAGATTG GGAACGTTCC CAGTGACAGA TTCGAGTTAC CCTGTCCGGG CTACTAAGGT TAACACTGAC GACCAGCACG TGAAGTCTCC AAAGCCGAAA AAGCCACGAT TCACCGCCAT TGGGTCCTCT GAACGTTCCA CTTCCCGCCA CAATACCACT TCTAGCAAGA CCTCTTCCGC TAGTCAATCC CCGGCCTTTT CTCGACCATC GTCAAATTCC GTTCAGGGTC CTAAGCGCAA CAAAAAGGGA CCAAACGGTA AGACAGTGAT GAGAATAATG GTAGTTGAAG ACGATCCGAT CAATTCGCAA ATCTTGCAGA AGAGGTTGAA AATGGACAAG CATGTTGTTG TGGCTGTTAC GAATGGGCAA GAGGCAGTGG ACCAGTTGGA GAAGGACAGA GATATCGATG CGATATTGAT GGATATACAG TGAGTTGGCG TCATTGCTCA TTATTATGCG TACTGACGTG GCGTCTAGGA TGCCCATCAT GGATGGTCGA ACATCTGCAA AGGAAATTCG TGAACTTGAA GCTAGAACTC CCCAACCAGA TGATATTGAG CCATTCAAGG TTGATGGGCG GACCCCCATC TTTGCCGTCT CGGCGAGCTT ATACGAGGAT GATAGGGCGA ATTTGGCAGA GAACTTTGAT GGATGGTTAT TGAAGCCTCT GGGTAAGTGC ACCCATACCG TATGTCAAGC CTGGCTAACA GCCATCATAG ACTTCTCCCG CGTTCGTGCA ATTTTAGAGG GGTTGGAGAG CTCAGAGAAG CGAGTAGCTG AGGTGTATCA GCAAGGCAAC TGGGAACGAG GTGGATATCT AAAGGGTGAA TCACACTTTC AGAAGATTTC TTCGCAATCA CACTGATATT CCCCGGGGTC TCACTTAGCC GCGCCTTTGC CTGCCTCCTC TTCTGCCTCT ACCCCTTCAA CCACACAATC TTCTCCCTGT ACGAGCACCT CATAAACCCA ATATTTGGTT ATTTTGTATC TCTTTCTCAT GGCGAATAAA AAGCATACTT CTTGATACTC CTCATTCGTA TAACCCTCAG ACGGATCTCA AGGTGCATCG TAGAAACTTG TAACACTAGG TCAACCACTT TTAGAACGAG TTTTTTAAAG GGTAACAGTA GTTATTTTGA ACATTTTTAT TTCGGAATCC ATAGACATTT TTATTTCCAC
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Protein sequence | MPDGSTSPRE PANSAYSTHE PQSKRHSSPQ SVAMPAAPRF HRQHTSSQDH GSSSTPISPA ASSTGPLSPS IPPGSFVFPI RSVFQGMVHS DSSNGITEGH QQRKKDGLQR SSGSSSPLRS PALSDAHRFS TDAAGALHDE PDAGIQTIAQ MLQQDGSAPL KEKGKHQPGV ATFVGKAERD RNGSGGGETL KPSSPDASGH LGNSPITHSS SDSEHQKQQD VAKSSRSEEG TNDSPESSHG SGGTLKQATR TDLPAALQRS STVKGKVSAS GLTKTSPSNY RHFPSEHHSG QRERRFSTVN KVNPPSRNSS SHPVDASHPP NPELQHPVPR RNTRQQHTQD AEGNNRTSSH GSRTSLEVDE SGMRSLISDM SGIVLLGEAG SWGSMGGSGV SGSKGTDGGT GTTGTVDSAS IDSGHATGGR GQGDERQVTK ASLAAKHGAR QTSRQDSVRS FIQSQAGTTN LQDPNAPTLS PMPSGSPPAE GSQDATVSME DSANNEKQRE QQQEEGEAEQ QGEEENGQVE QPVAASAEDA ENPDEPAVTM RFEHVVTEEG HHIVAGREGR LRRCQDEPIT TPGAVQGFGV LMVLEEDYET GNLEIRQVSE VNIFVIVMSK YQETILRDTL EYLPESYGGS NSVEDSGPSV FLLSGFGEPG SGVEEGETEG GPETEVRSTA SSAGGKRKEW TCWVAAHRPE HRGWNKVNEI GEPIPPPDWI ILEFELERDV YNPLVHPSEN AETSTAAANS NARSLRPDST AASVSASGSN SNSNTLSAST RSGERTLDSL TSTLAGGRAG VSAGLGPGTA SSDASPGDLG SSASDFTSVP KQEARMGLDG LEMHIPLEKI LESTTNHASP LRALERMRGT TVNASNEARS RGRGRGRGRG GRQRPIRTES GGTGTMDIFA VLGQINDQLV AAPDLDTFLK VAVGLMQDIC RFHRVLIYQF DEQMNGLVVS ELVEWGKTTD LYMGLRFPAT DIPPQARELY KINKVRMLYD RSQTTARMVL RNKEDLDQPL DMTHCYLRAM SPIHLKYLGN MSVRSSMSIS IMAFGQLWGL IACHSYGQHG MRVSFPVRQM LRLLSDSISR NIERLSYAQR LHTRKLISTI PDRSHPTGYI ISDAGDLLQI FGADAGLLVI GDGCKLLGHS NEQGQAMLAI AEYLRIKRFD NLNASSSIQR DFPDLVLPRA SDTIAGLLYV PLTAKAGQDF IVFLRKGQVR EVQWAGKPYK DDKASEEASL EPRKSFKAWT ETVTGCSRAW TDHQLESAGV LALIYGKFIQ VWREKQTAMA SNQLTAILLS NTSHAVRTPL SQIINTLELA LAGNIDDDVR KMLENSHQAS RALLFHVHDL LDLTRIETGN ETAFNDPFDI RQSISDAVRL YQTEVARRGL EFRVNMAEDL PQYVVGDSRK IKTVISNLVA NSVKFTEKGF IEVYCGIQRP FDGESSQTSL TESKEGNTIT IEIVISDSGC GIPTVQLEEM FFTLEGAEPL QKNTGVGLGL AVVARIVEQL EGQLRAESEV GVGTRFYFNV PMVAHPSGRP GSRQSSHNSR NTNSSQLRTR TGSSGSKSDS VVSLRSDGSG VPEIESFVQD FGGSHLPAPV GDDDPRLLEA QERMSRLGTF PVTDSSYPVR ATKVNTDDQH VKSPKPKKPR FTAIGSSERS TSRHNTTSSK TSSASQSPAF SRPSSNSVQG PKRNKKGPNG KTVMRIMVVE DDPINSQILQ KRLKMDKHVV VAVTNGQEAV DQLEKDRDID AILMDIQMPI MDGRTSAKEI RELEARTPQP DDIEPFKVDG RTPIFAVSAS LYEDDRANLA ENFDGWLLKP LDFSRVRAIL EGLESSEKRV AEVYQQGNWE RGGYLKAAPL PASSSASTPS TTQSSPCTST S
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