| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK03070 |
|---|
| Symbol | |
|---|
| ID | 3254497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | - |
|---|
| Start bp | 904363 |
|---|
| End bp | 908937 |
|---|
| Gene Length | 4575 bp |
|---|
| Protein Length | 1161 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638253798 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_567900 |
|---|
| Protein GI | 58260980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACAGGCCCCG TACGCTGCTG AACCCTCGTA TACACATCTA CTGACAACGC CGCACACCAA
CAGCCCGTGA TGGCAGCACC CATATCTGCC ACGGGCGAGA GTCCCATTGT GGCGAAATCG
ACGCCGTCGA CAATCAGTGG GCCACCCGCC GTGACCTCGA CAACGGGAGG AGGTGGCCGA
GGAAGGGGCA AGGATGGGAA AGAGAAAGAG ACGTTTGCGT GCACCTTTCC CGGTTGCGGC
CAGGTACGTC GTCAAGACAT TTCTAATTGT GACAAAGGCG GGTACTGACA GAGAAAAAGA
CTTATAGCCG TATGGAATAC TTGAAGAGGC ATCAGAGAAA ACGTTCGTCT TGCGGTCTTC
CAGGGCATCA GCACGTTGAA TATTGACTGC TTGAGCTGAC GTGGTTATCA TAGACCAAGA
CGACAGGCCT TTCCAATGCA AAGACTGTTC TAAAGCTTTT GCTCGAAGGT AAGTCTCGTC
CTTTGCTTAC GACGTGAGAT CTATGGGGAT ACCGTTCCTT CGTCTAGTGA CCATTTAGTG
TGACTTGTGA CTGTCTATCG GTTACACACG CAGCTATAAG ATCATTGCAG TTGAAGGGCC
AGGGAAATAA TGTCGGAAGG GCTTCGGATG TTGTCGAACT TGACTTTTCT TCCTTTGGCC
ATCTGCAATC GGGCAAATTT TAAGGCTGGA AATGACAGAT CAAGCACGTC TTTTTGGCCG
TTTTCATTTT CTGATCTTGA TCGCTGAGCA TCGAGATGGA ATTGGCGATT ACTCTGCCTG
AACTTCAACC TTCATAAATT TCTTGACTAT CTTTTTCTAA CCTCAAAACG TATGCTGACT
CATTTCAGTG ATGTCCTCCT TCGACACCGA CGTCGATGCC ATCCTACCCC ACCTCCCGTG
GACCATTCCA CTTCTCCACC TGCACTAAAC CGTATTTACA ACGGTATGCC CGTCTCATCA
TCCCGCACAG ACGCGCGCGA GGCATCGCCA TCCCATCACC GATCGCGTAA GCATCCCAGG
CAGAGTCATG GTGATGAAGA GCGCGATCAC TCCCGTGCTC GAATTGATCC CGCTCTGAGA
GACGACTATA ATGAATCAAG CGGGGAAAGA TATCGAGACA GTGGTCACGA CAGTAACGAC
ATGTATGGCC AATACTACAA TGCGTCAGCC AATGACGATC ATCCCAATTA CTCCTCTCAT
CTTATGCCCA TGTTCAACCA GGATCAGTCA TATCACAGCT TGAACGATCC CAACCATCTC
GAAGATGCAT CTGTCCTCTT GAGCATGGCT TATCCCGGTG GGGTCCCTGG GAATGACAGA
CAATCGCAAG AACAAAGAGA TTTGCCGGAA TGGGCTAGCA ATCCCACAAT CAACTTGATT
ATGGAGACTG CTGTTGCCAA CCGCGAACGC GAAGATGCCA ACAAAACCCC TTCCAACGAC
AACGACAACG GTACCGGTCC CAACCCATCG CCCATTGAGG TCCAACCTCA AACTGTCGCT
GCCTCTGCTG GCGATTCTGT TACGTCTGTC CCCGAGCAAA CGGAGATGTC AGCACCCGTC
TCTTCTGCCC CTGAAGTCGC GCCTTCAGGG CAACAAGAGA TTGACCCAAG GCTCCAGAAT
GACTCTGCTC CGGAGTCCAC TTCTGGTACT GCCGAGGGTT TTCTCAACGC GATGAGCTGG
TTGTCGGGAA TGGACAACCA GGGAGTGTTC AACAAGACGG GCAACACGCC TGATACTTCC
AATTGGGTAA GTTCGGTTTG ATGTGTCCGG AAATATAAAG TATGATATGC TGATAATCGT
TTCGGAAGTC CCTTTTGCGA TCACCCAAAA ATACCCCTTT TTCTATTTCT TCTTTATTCT
CTCCTTCCGC TTATGGACTG CAAAGTGACT TCGCCAATGA TTCCACCTCC AATGACAACA
GCAACAACCA GCAAAGCTCC CCAAATGTGC TCCATATCCT TGAACAGCTC GCCATGTACG
AAGTCCCTCA AACGGCTGCG AACCCCAACC CCGAACGGCC TCTTCTCCGT GTTCATCACG
GCGAAATCGC AACTCTCGCT GGGGACGAAA TTGACAAAAG CAGCCGATTC TACATCCCGG
CGGATCAATT TAAGGGATGT TACCAAATTC CTCACTGGGC CCTCCCACCT CTTCGCACTC
TCTCAATGAT GGCTTGTCGT ACTTTCCATA CCGTCCTCAA CCACTTTTCC TTTGTCCACC
TTCCCACGTT CAGGCTTATT GATACCTCTG CTTGTCTGGC TTTTGCCATC TGCACTGTAG
GCGGTATCAG GACGGGCAAC TCATCCATAT CGGACCAATA CCTCTGGCAA CCTCCTACCG
GCGACGGCCG GCCCAATCCT GAACGGTCCA AGGCCTTAGA CGGCCCTGTT GTTCCTGATC
AGAGCTGGGA GAGTTTGTAT GAGGAGAATT GGTATCGTTG TAACGAGCCA GTCCGGGCTC
GACAGGTGTC CGATGTGACT AATTGGAAGA ATGGATTGGT TGTGAGGAGC GAAAAGATGA
ACATGCTCGT TAAGTCGTTT TCGCTCGCAA AAGGGGTTTT GATGACCGAA TATAATGTTG
CGCTGTTGCA AGCGTTGATC CTTTATCATG CTCCTAATTT TTTGAGTGAG GATGAAAGGG
AACGGGCGTC CGCGAATATG TTCTTGGGTA CTATTGTCAA TGTGCGTTCT GATTTGCTTG
CTTGGTTGTA TAGGTATGGA GCAAAGAAGT CTAATGTACT TGGCAGGTCA CTCGTCAAAT
TGGATTCTTC ACATCCGAGA ACGACCATTA CGCCCAAACG ATTCGCGTCC CCGAGGAACC
ATATACTCCC AACGAGCTCG ACCGATGCTG GCGCGAATGG ATCCAGCTCG AAACCCGACG
CCGAACAGCA TACCTCGTCT ACCAACTCGA CACCATCTCC GCCCTCGAAT CAAACATTCC
TTGTATCCTC TCTCCATGCG AAGTAGCGCA CATCCCCCTT CCAGCACCTG ATACGCTGTG
GAAAGCCCCC ACTGCCGAAG CTTGGCTTAA AGCCGTAAAG AAGTATAGAC CTATGACGTT
GGACGAAGCT ATGCGTCGAA CATTCTTCCT CCCCACCTAC GGCGCCTTCG ACAAGCTGCA
CCAAAAGGCT GATACGCAAT TTTACCATCT CCTCAACGAA AGTGATTACG GTCCTTTTGC
TCGTATGGCT ATGGTGATCA CCCTTCTTCG AGGCGTTATT GACATCGGGG AAGGGAAGCG
TGATAGAGGA GACTGGAGGG ATTTGACGGA TTTGTGGGTG GGTTGTGCGT GGTTGAGGCC
CGAAAGGGTG ATGCTTGCGC AGGATGGAAC GGATTTGGGA GTGATTACCA GGGACAGTTT
GAAGGATAGG TTCAGGCAGG CTCTTCAAAA AGTAAGCGAG AACAAAGATG ATCTTGATTT
GAGTGCTAAT GATATTTTCA TAGTGGAGAG AAGGATGGGA CTTTGATAGT CTTTGTGCTT
GTCCCACGTC GGGTGTTACT AAATGCACCA ACGGAATGGT CAGCCCTGAA AACAGTGGTT
CGGAAGGGTC GCCCAACTCT GATGAGAATG AGATACCCAA GGAAACTTTG AATTATTGTG
ATGGTGAGGC GCCATGGCTT TTAAACCCCT CTTTTAAGCA TGCTAATTTC CTTTATCTTG
TAGATGGACT ACCTATCTAC TGGCTTGCTC AAGCTCTACT CAACATACTC TACGCTAGCT
CCCAATCTCC TGGTACGAAC GTCTTCAGCG GTTTACATTA CGGTGATATG CTCAAGTCCG
CACGTACATT CACAAGAACA GGCGAGGGTG TGCCTATAAA GATAAAAAAT ATGAGCGCTT
CGCAAGCAAG GGATGGAAAC CACCGTAACT CCTATTCTGA AAATCCAGTC TCCATCCAAT
TGACATCAGG ACGCAAACAA AGTAACCCCC CTACCCCAGC ACAAACATCT TCCAATCCGC
CTTCTGTAGG ATCCACCAAT TTTAACCCCC CCGAAGCCGA ATTATCCGCC CTGAGCACTG
GCATGAACGA AGGTACCTTC GCAGGTATCT TACAGGCTCT TGCTGCTAAT TCGGGGGAGT
TCGGGATGAA TATCGGTTTG AATGTGGATG GTTATCCAAC TCAGTCTGGT TCTGGTTCTG
ATTCTGGTCC TGGATCTGGG GCTGCGGGTG ACAGTAGTAC CGCCGTCACT TCACCCCAAG
CGAATGTCGG TGCAAGCAAT ATCGTCAGTA GTAGCGGAGG TAATGGAAAC ATGGAACTTA
CGGAGAACGA TTTGGCGAAG CATCTTGGGT TCATGATATG ACCAGCAGGC CGTTTGGACC
AAAAGAGAGA TGTGGTGAAG GAGATGTATG TGATGTGTAT TTTTTTGTGA GATTTGTTTC
CTTTCGAGGT ATTTTCTTGT GGATATGATT CGTACGGACA GGGTGGTCGT CGACAGTCTG
CGAAATACAG CTTGTCAAAA AGGCATAGAT CGAGTGTTCT TGTAGTGATT CTTTTGTTTG
TTATGGTATA TTGATTTGTT TACGTCTCAG AAAAAAGTAG CTTCTACAGC TGTCGGGTAA
TTGTTCGTTG ATTCT
|
|---|
| Protein sequence | MAAPISATGE SPIVAKSTPS TISGPPAVTS TTGGGGRGRG KDGKEKETFA CTFPGCGQTY
SRMEYLKRHQ RKHQDDRPFQ CKDCSKAFAR SDVLLRHRRR CHPTPPPVDH STSPPALNRI
YNGMPVSSSR TDAREASPSH HRSRKHPRQS HGDEERDHSR ARIDPALRDD YNESSGERYR
DSGHDSNDMY GQYYNASAND DHPNYSSHLM PMFNQDQSYH SLNDPNHLED ASVLLSMAYP
GGVPGNDRQS QEQRDLPEWA SNPTINLIME TAVANRERED ANKTPSNDND NGTGPNPSPI
EVQPQTVAAS AGDSVTSVPE QTEMSAPVSS APEVAPSGQQ EIDPRLQNDS APESTSGTAE
GFLNAMSWLS GMDNQGVFNK TGNTPDTSNW SLLRSPKNTP FSISSLFSPS AYGLQSDFAN
DSTSNDNSNN QQSSPNVLHI LEQLAMYEVP QTAANPNPER PLLRVHHGEI ATLAGDEIDK
SSRFYIPADQ FKGCYQIPHW ALPPLRTLSM MACRTFHTVL NHFSFVHLPT FRLIDTSACL
AFAICTVGGI RTGNSSISDQ YLWQPPTGDG RPNPERSKAL DGPVVPDQSW ESLYEENWYR
CNEPVRARQV SDVTNWKNGL VVRSEKMNML VKSFSLAKGV LMTEYNVALL QALILYHAPN
FLSEDERERA SANMFLGTIV NVTRQIGFFT SENDHYAQTI RVPEEPYTPN ELDRCWREWI
QLETRRRTAY LVYQLDTISA LESNIPCILS PCEVAHIPLP APDTLWKAPT AEAWLKAVKK
YRPMTLDEAM RRTFFLPTYG AFDKLHQKAD TQFYHLLNES DYGPFARMAM VITLLRGVID
IGEGKRDRGD WRDLTDLWVG CAWLRPERVM LAQDGTDLGV ITRDSLKDRF RQALQKWREG
WDFDSLCACP TSGVTKCTNG MVSPENSGSE GSPNSDENEI PKETLNYCDD GLPIYWLAQA
LLNILYASSQ SPGTNVFSGL HYGDMLKSAR TFTRTGEGVP IKIKNMSASQ ARDGNHRNSY
SENPVSIQLT SGRKQSNPPT PAQTSSNPPS VGSTNFNPPE AELSALSTGM NEGTFAGILQ
ALAANSGEFG MNIGLNVDGY PTQSGSGSDS GPGSGAAGDS STAVTSPQAN VGASNIVSSS
GGNGNMELTE NDLAKHLGFM I
|
|---|
| |