Gene CNK02860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK02860 
Symbol 
ID3254632 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand+ 
Start bp842785 
End bp843755 
Gene Length971 bp 
Protein Length273 aa 
Translation table 
GC content51% 
IMG OID638253777 
Product2,4-dienoyl-CoA reductase (NADPH), putative 
Protein accessionXP_567881 
Protein GI58260942 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTA TCGATTACAG CGGCAAGATT GTCTTTATCA CCGGCGGGGG TCGTGGTATT 
GGTCTCGCCT TGACGGAGGC TTTCGCGGAA GGTAAGTCAG CAGCACCCCA TATCTAATGC 
TCTAACGCTC AAACGATATA GCCGGTGCGA CTATTGTTGT TACTTACAAC TCGCGAGACC 
CTTCGGAATA CGTTCAGGCC GTCTCAAAGA AGTTCCGCGT TCCCATCCAT GTCTACCATT 
GCCCCGCCGA GGACTCCAAA CGCATCGATG AAGTGATTGA GCTTGCTAGC AGGGAAGTGG 
GCGAGGTGGA CATTGTGATT GCTAATGCCG GCATGAGTCA GTGGGTCGAA ATGATTGACA 
TGAAGGATGG TGAGTCATGA ATATTGCAGT GAAAGCCCAG GATTAACGCT CCTACAAGCC 
GACTTGCACA AGATGTTTGA CGTCAACCTC GTTGCCCCTT TGTTCCTCGC TCGTGCATTC 
ACCAGACATT GGCTCGGTCT TCCAGCCACC ATTTCTGAGA ATGACACTGC CCAAGGGTCC 
AGAAAAGATG TTGTCAAGCT CAACAAGCGG ATCGTCTTTA TTGCGTCTAT TAGCGGTCTC 
GTGAATATGT CTCCTCAGTA TCAAGTAGCC TATAATGCTT CCAAGGCTGG CCTTGCCATG 
GCTTCCAAGG TATGTGTTTG AGATCGTCCT CAATCTGCCG GGATGCTGAT CCCTTGTAGT 
CTTTAGCCGG AGAATGGGCG AAATACGGTA TCACTGTCAA CAGTATCTCC CCCGGCTATG 
TCTCTACCGA TATGATCAAG AACCCACCTC CTGGCGAAGG GGAGCGTTGG GTTGCCAGGT 
GGAATGAGAT GACCCCTGTC GGTCGCTTTG CGGATCCCAA GGAAATTGGT GACACTCTGG 
TACTCTTATG CTCCGACAAA GCGTCGACTT TCATGACTGG ACATGACCTT GTGATTGATG 
GAGGTAGGTA A
 
Protein sequence
MFSIDYSGKI VFITGGGRGI GLALTEAFAE AGATIVVTYN SRDPSEYVQA VSKKFRVPIH 
VYHCPAEDSK RIDEVIELAS REVGEVDIVI ANAGMSQWVE MIDMKDADLH KMFDVNLVAP 
LFLARAFTRH WLGLPATISE NDTAQGSRKD VVKLNKRIVF IASISGLVNM SPQYQVAYNA 
SKAGLAMASK SLAGEWAKYG ITVNSISPGY VSTDMIKNPP PGEGERWVAR WNEMTPVGRF 
ADPKEIGDTL VLLCSDKAST FMTGHDLVID GGR