Gene CNK02780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK02780 
Symbol 
ID3254683 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp821969 
End bp823491 
Gene Length1523 bp 
Protein Length392 aa 
Translation table 
GC content55% 
IMG OID638253769 
Productconserved hypothetical protein 
Protein accessionXP_567875 
Protein GI58260930 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5053] Translation initiation factor 4E (eIF-4E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0554917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGC GAACAACCTC CCTCAGCGGC TCATCCAGGC TTTCACTCAG CGTAGACAAG 
ATTCCGGCTG CAACTCAAAT CTCAGTCGCC GGCAGGCATC CGCTCAGGCA GGAGTGCGTT
GCGTCGATAT CTCCTACAGA ATATCCTACG CTGATACGCA GAAACTAGCT GGTCCATATC
CTACGTCCAT CGGCCTCCGA ATGCTAAGGT TGACTACGAA AAAGAGATTC GCCGGGTCGC
TACTTTTGGC TCAGTACGTC TCCTACCAAA CGTCACTTGG TATCACGTTA ATGATAATTG
ACTGTGGCCA TTTGGATTGA CAGATTGAGT CTTTCCTCCA TCTCTACTCC CATCTTACCC
CGGTGAACGA ATTACCTCCA GTCACCGACG TACTCGTTTT CGTCAGCCGG ATTGGTCGAC
CTGGCGTTTG GGAGGAGATG CGAGAGTATG TCTTTGCTTT TCTGGCTTAA TTGAGCTACA
CTGACATGTA AGTCTACAGC GGAGGTCGAT TTACCATCCG GCTCGTTCAC CCTATCGTCC
CCGTCCTCTA CGAATCGCTT CTCTTCTCTC TTATAGGTGA CCAGTTCGAT GAGGCGGATA
ATGTTGTGGG CTGCGTTTTG AGCATGAGGC AGGCGGAGGG TATCCTGAGT GTCTGGGTGG
AGGATGAAGG AGAAAATGTC CGAAATGGCT CCTTAAGGTA TGTTTACCTT ATCCTGCCTA
TATGTTGGCA TTATTGACCA AGAGAATAGG GCCAAGATTC TTTCCTTACT CAATCTTCCA
CCATCCACCA CATGTGACTA CCGCGCGAAC CGAACTCTGC TCGAAAATGC CAACAAACCC
GCTTACATAA GCACCAATTC CACCAACAAC GTAAACGGCA TCTCCACCAA TGGCGAAGGC
GGTGGGCACG GTCACGGGCA CGGACATGGG CATGGGCATG GTGGGCGAGG TGACAGAGGA
GAAAGGGAAC ACGAAGGCGG TAATCCCGGG GGCGAACGTC GTACGCACGG TACCGGCCGT
GAGAGGGGTG AACGGATTGG TGGTGACCGC GAACACGAGT ACCATCCTCG TCCACATGGG
GGTCGGTATG ACCATCACCA CCACGAGCGG CCGCACAGGG AGAGGAGTGA GCGCGCCGAG
AGGATGTCGG CAGTGGCTGC AGGCAGCACT GGTGGAGATC GACCCGAAAG ACCCGATCGC
GAACGAGGGG AACATGCCCA TTCAAATGTA GGAGGCCAAG GGCACGAGCG TGTAGGGAGT
TCGCACTGGG GTACAACAGG AGGATTTAGG GATAGGGAAA GTCAGCCGGG GCAGAGGAGG
ACGGTCGTAA CGCCTGGAGC TGCGGCTGCG GCGGGTTTGC CGGCTGCACC TGGTGCGGCA
GCTCCTGGAA ATGGGGCTGG GGTGTGGTGA GATGCCCGTC TGTCGTTCTA GGTAGAGGGA
GTGTGTTAGG GGTGAAAACG GGGGGGGGGG GTTTATGTAA CCCAGAGTAG ATCAGGCATG
TGAGAATATC ATGCGAAACT TGA
 
Protein sequence
MAQRTTSLSG SSRLSLSVDK IPAATQISVA GRHPLRQDWS ISYVHRPPNA KVDYEKEIRR 
VATFGSIESF LHLYSHLTPV NELPPVTDVL VFVSRIGRPG VWEEMRDGGR FTIRLVHPIV
PVLYESLLFS LIGDQFDEAD NVVGCVLSMR QAEGILSVWV EDEGENVRNG SLRAKILSLL
NLPPSTTCDY RANRTLLENA NKPAYISTNS TNNVNGISTN GEGGGHGHGH GHGHGHGGRG
DRGEREHEGG NPGGERRTHG TGRERGERIG GDREHEYHPR PHGGRYDHHH HERPHRERSE
RAERMSAVAA GSTGGDRPER PDRERGEHAH SNVGGQGHER VGSSHWGTTG GFRDRESQPG
QRRTVVTPGA AAAAGLPAAP GAAAPGNGAG VW