| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK02670 |
|---|
| Symbol | |
|---|
| ID | 3254505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | - |
|---|
| Start bp | 774581 |
|---|
| End bp | 777186 |
|---|
| Gene Length | 2606 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638253759 |
|---|
| Product | peroxisome targeting signal receptor, putative |
|---|
| Protein accession | XP_567866 |
|---|
| Protein GI | 58260912 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.996882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TACAATTCCT CGTTCGTCAT TTCTGCACCA GCAGCTCGAT CTTTAACCAC AAATTGCACA
CCGCAGATCA GAATGCAATC CTTCCTCAAC GGCGCTGATT GCGGCCCCTC CAACCCTCTT
AAACAGGTCG CTCAAAGGGA AGCTGCGGAT CACTCTCTTT TCAAGGTAAG CCACTTCTTC
AATGGCCTCT TCTGATGGTA AAATCGGTTA GGATCGCCTT GTACCCCAAT CATCTACGCA
ATTGAATACG TTCCGGTCTT CCCCATCATT TAACCCGCAA GGTCAAGCAC CAATCGCACG
ACATGCCAAT CCCACCCCAC ACCCATTCAA TCTCTCTCAT TTGTCAGCTG CTTTAGCAGA
ATCCAGTCGG AGCGGCAGTG CTTCTCCAAT GCCTGCAGCT TCGCATTTGC CATTGGGATC
TAGCTTTGAG GCTGGATGGA ATGAAGCGAT GTCCAATGGG CTCAAGTCCC CTCCTTTTAT
AACTCAGGCT CCGTCTCGGG CTCCAGTTCA ATGGGTCCCA CCACCGTCCC AAGAGAGTAA
CTGGATCAAC GGATATGAAG AATGGCAGTC TTCACAAGAG AAGGGGAAAC AGAGGGCTAT
CGGGTCTGGC CATCAAATGG CCCACAATCC TCCGTACTCC AGCGACATGC CGAGCGCTTC
CATGGGCATG AGCCAAGGCA TGGGCATCAA TTATCAGCCG TCTTTCTCCC GGATGTACGG
CCAAAATCTT CAGCGACCAC CGGCTTCTTC TCTCTCCCCC GAGGTCCAAT TAGACCCAAA
GCAGATGGAA GCCCTTTTTG CTCGAGCTGA AGAAGATTGG AAAGCTACCG ATGCAGCGAC
ATCTCAGACA GCGGAACAGA TGGATGCGAA AGGGAAGGGA AAGGAAAGGG AGATGCCAGC
AGCTGAAGAA ACGGTGGAGG AAACTACTGT AGATAATGCA GAGGAAATCA AGGAGGCTAA
GGGCGATTTC GAAAAAGTTT GGGAAAGCTT GAAGCCAGAA GCAGAGCGAC TAAATAAACT
GGCAGAATGG GAAAGGGACT TCTCTCAGGT ACATATAATC TGTTTTCTCT CCGTTGGGGT
TCGCAAATCT AACAAATAAT AGTTCACGAA TGATGAGGAT GATCTTTTCG ACGTTTTGAA
TGAGAGCCTA AACCAACCTG ATGTCGGTCA AGCGAGTCTT GATCAACAAA CCGATTTCCT
TCAAGACGAA CGGTTAGCGA TGGGACAAGG CTTAGCTGCA AGAGACGACG GCATACCTCT
GATAGGAAGT TATGATTTCA GTAAGTTCCA TATCAACGCA TCGAATACTT CAATCCTGAT
AAAATCTCTC GAGGTTCCCC TTCGCAACAC CTGGCGTCGC TTTCTGCTTC CTACCTTTGG
ACTGAAGCCA ATCACCTTTT GGCATCCGGA GGCTCTCTGT CGGAAGCTGC TATTATGATT
GAGCAATTCA TTACGCGTTC AACGCCGCAG GAAAGGATCC AAATCAACGT ATCGCTGACC
GAAGCATGGG CAACATTGGG TAGGGTCCAT GCAATGGATG AAAAAGAAGA AAAGGCTCTT
GAAGCGTTCC AAGCGGGTAG CAAGGCTTTG GAGCAGGAAG GAATCACAGG AAAGGAGGGT
GTTGCCGGCG AGATGCTCAC AGTAAGTCAT ATCTTTGCGC CTTGGCTCGA ACTAAAACGG
AAATCATAAT AGAACCTCGC GATATCATAT GTCAATGAAT CCCTTGATCT GGCCGCCTTG
TCAACTCTGC ATAGATTCCT GAGTCTCACA CATCCAGCGT ATGCCGGCCC TGCCCCTACG
ACGTCTTCAC CGCTTCTTAC CTCCTCCACT GCCTCACCTT GGGCTCTTCA TCAGCAAATG
GCGGATTCTT TCCTCGCGCT AGCAAGGGAA CAGTATCAAA AAGGCGAAAA AGTCGACCCA
GATGTTCAAG TCGGACTAGG AACATTGTTT TACATGATGG GGGAATATGA CCAAGCTAGA
GACTGTTGGG TGGCGGCCTT AAAGGAACGT CCTGAAGTGA GTGCTTGACC CTTTACTGAC
CTCTCGCTGT CTACTGATTC ACAACAGGAT TACCTCCTTT GGAATCGCCT TGGTGCGACA
CTGGCCAATG GTGGATCATC CGAGGAAGCG GTCGATGCTT ATCGTCGTGC ACTCGAATTG
AAGCCTGGAT TCACAAGGGC GATTTCCAAT CTCGGAGTTG CCTGTCTTAA TATTGGAGTA
CATCGTGAAG CTGCCGAACA CTGTATGTTA ATCTCATTTT CCTTACTCGA CTAGCTTGCT
GACTGCGGTT TAGTCCTCGC CGCTTTATCT CTTCATTCGT CTCAGACCGA GGGGCACAGC
CAGCAGATTT CTAATGACTC TGCTGCCCTT TGGGGTACTT TGCGCAAGTC CCTTATCGCC
ATGGACTTGC CTGATCTGGC AGCTAAAGCG AGGCCCGGTA CCAATCTGGA GGTGTTCAGA
GCAGCTGGTT TTGATTTTTG ATATTAGAGT CGTATGGACG ATTCGGATGA TTAAAGGGAG
TGATCTGTGT TGCATGAGAT TTGGAAGATG TGTTAGTCAT ATAGCTTGTG GCTTGTAGGT
CGATATCAGC TTGTTGTGAT AATGAT
|
|---|
| Protein sequence | MQSFLNGADC GPSNPLKQVA QREAADHSLF KDRLVPQSST QLNTFRSSPS FNPQGQAPIA
RHANPTPHPF NLSHLSAALA ESSRSGSASP MPAASHLPLG SSFEAGWNEA MSNGLKSPPF
ITQAPSRAPV QWVPPPSQES NWINGYEEWQ SSQEKGKQRA IGSGHQMAHN PPYSSDMPSA
SMGMSQGMGI NYQPSFSRMY GQNLQRPPAS SLSPEVQLDP KQMEALFARA EEDWKATDAA
TSQTAEQMDA KGKGKEREMP AAEETVEETT VDNAEEIKEA KGDFEKVWES LKPEAERLNK
LAEWERDFSQ FTNDEDDLFD VLNESLNQPD VGQASLDQQT DFLQDERLAM GQGLAARDDG
IPLIGSSPSQ HLASLSASYL WTEANHLLAS GGSLSEAAIM IEQFITRSTP QERIQINVSL
TEAWATLGRV HAMDEKEEKA LEAFQAGSKA LEQEGITGKE GVAGEMLTNL AISYVNESLD
LAALSTLHRF LSLTHPAYAG PAPTTSSPLL TSSTASPWAL HQQMADSFLA LAREQYQKGE
KVDPDVQVGL GTLFYMMGEY DQARDCWVAA LKERPEDYLL WNRLGATLAN GGSSEEAVDA
YRRALELKPG FTRAISNLGV ACLNIGVHRE AAEHFLAALS LHSSQTEGHS QQISNDSAAL
WGTLRKSLIA MDLPDLAAKA RPGTNLEVFR AAGFDF
|
|---|
| |