Gene CNK02620 details

Gene Information

• Locus tag: CNK02620
• ID: 3254378
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 761546
• End bp: 763565
• Gene Length: 2020 bp
• Protein Length: 457 aa
• GC content: 49%
• IMG OID: 638253755
• Product: ATP-dependent protein binding protein, putative
• Protein accession: XP_567862
• Protein GI: 58260904
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5272] Ubiquitin

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.675175
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTCACTAGA ATACGTTTAT CCTTTTCTCG GCAACGTGAG TACTTTCGCC ACCCGTTTCC 
CCCTCCCCAG ACCGCGGGGA GCAAGCATAG AGGATGGATG GAGAACGGGG AATAATCGCA 
TGGGAAATAC GGCGGAGGAT CCACCTCGTT GCCACCCACA TTCCACTACC TTCTACAGTG 
CTCGTTCTGC GCATGCAGCT CGGTTCCACG GCACATCCGT TCTTCCTCCG CTCTTCATCC 
ATCCTTTGCT TACTCATCCG CGCACGCTCG CTTGTATAAA AAAGGCTCGA GCTGACAATT 
GCATTTCTTC GTTCTCCTTC GTCTCTTATC TGCCACTGCA TCGCCACCGA CTTCTTCACC 
CATCCATTCA CACAGCGCAG CGCACACCCA AACACAATGC AAATTTTCGT CAAGACTCTC 
ACCGGTAAGA CTATCACTCT CGAAGTGGAG TCTTCCGACA CCATCGACAA TGTCAAGGCC 
AAGATCCAGG ACAAGGAGGG TATCCCCCCT GACCAGCAAC GATTGATCTT TGCTGGTAAA 
CAGCTTGAAG ATGGCAGGAC TCTCTCCGAC TACAGTAAGT TGACATCCTA GTGGCGGCAC 
ATATCATTTA CTAATGCCAT TGCAGACATT CAAAAGGAGT CTACCCTCCA CCTTGTCCTC 
CGTCTCCGAG GCGGTATGCA GATCTTTGTC AAAACCCTCA CCGGCAAAAC TATTACCCTT 
GAAGTTGAAA GCTCTGACAC GATTGACAAT GTCAAGGCCA AGATCCAGGA CAAGGAGGGT 
ATCCCCCCTG ACCAGCAGCG ATTGATTTTC GCCGGAAAGC AGCTTGAAGA CGGCCGAACG 
CTCTCCGACT ACAACATCCA AAAAGAATCC ACTCTCCACC TCGTCTTGCG TCTCCGAGGT 
GGTATGCAGA TTTTCGTCAA GACTCTTACC GGAAAGACTA TTACTCTTGA GGTTGAGTCC 
TCCGACACTA TTGACAATGT CAAGGCGAAG ATTCAGGACA AGGAGGGTAT TCCCCCTGAC 
CAACAACGAT TGATCTTCGC CGGAAAGCAA CTGGAGGATG GTCGAACTTT GTCCGATTAC 
AGTGAGTCGG CATTTGCACA ATGTCATGAT GGTTGCTAAT ATTTTTTATT CAGACATCCA 
AAAAGAATCC ACCCTTCATC TTGTCCTTCG TCTTCGAGGC GGTATGCAGA TTTTCGTCAA 
GACTTTGACT GGAAAGACAA TCACTCTTGA AGTCGAGTCT TCTGACACTA TCGACAATGT 
CAAGGCGAAG ATTCAAGACA AGGAAGGCAT TCCCCCTGAT CAGCAGCGAC TTATCTTTGC 
TGGTAAACAA CTAGAGGATG GCCGTACTCT TTCCGACTAC AACATCCAAA AGGAGTCTAC 
TCTTCACCTT GTCCTCCGTC TCCGCGGTGG TATGCAAATC TTTGTCAAGA CGTGAGTCCC 
TGTAACACTC TTACTCTGTG GAAACTTGCT CACAATTTTC TCAGTCTTAC GGGTAAGACA 
ATCACTCTTG AGGTCGAATC CAGCGATACC ATCGACAATG TCAAGGCCAA GATCCAAGAC 
AAAGAAGGTA TCCCCCCTGA TCAACAGCGA TTGATTTTCG CCGGAAAGCA GCTCGAAGAC 
GGCCGAACCC TCTCCGACTA CAACATCCAA AAAGAGTCCA CTCTTCACCT CGTCTTGCGT 
CTCCGAGGTG GTATGCAGAT TTTCGTCAAG ACTCTTACCG GAAAGACTAT CACTCTTGAA 
GTCGAGTCCT CTGACACTAT CGACAACGTC AAGGCGAAGA TTCAAGACAA GGAAGGCATT 
CCCCCTGATC AGCAGCGACT TATCTTTGCT GGTAAGCAAC TAGAGGATGG TCGTACCCTT 
TCCGACTACA ACATTCAAAA AGAGTCTACT CTTCATCTTG TTCTCCGACT CCGTGGCGGT 
CAATAGGCGT AGAGCGTACA AGTTGGTGAA GCGAATGTTG TGACAGTTTT ATGAAGTCTT 
GTAGGCAGGC AGTATACATG AATGTATACC GAATCAATGG 

 

Protein sequence

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 
FAGKQLEDGR TLSDYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA 
KIQDKEGIPP DQQRLIFAGK QLEDGRTLSD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT 
ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLSDYNIQ KESTLHLVLR 
LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL 
SDYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ 
QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGQ