| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK02240 |
|---|
| Symbol | |
|---|
| ID | 3254568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006680 |
|---|
| Strand | + |
|---|
| Start bp | 661341 |
|---|
| End bp | 662994 |
|---|
| Gene Length | 1654 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638253717 |
|---|
| Product | large subunit ribosomal protein L3, putative |
|---|
| Protein accession | XP_567698 |
|---|
| Protein GI | 58260576 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTCATCAAA AAACTCTTCG CCAAACATGT CTCACAGGAA GTACGAAGAG CCTCGACACG
GTTCCCTTGC CTTCCGTATG TCCTGCGAAG ACAGACCTTT CAAAAGCCTG GGCTAATAGT
GATACAGTTC CCAAGAAGCG TGCCGCCCGA CACAGGGGTC GATGCAAGGC GTTCCCCAAG
GTCAGTTGGG TTTCAGTTCA AGGATAACAT GGGGCTGGGG CGGATTGTGG ATGACTTGTA
CAGATGAATG AGGAAGGGAG AGAAGGAGAG GAAAGATGGG GATAGAAGGT CTCGAAAGAA
AGAAGACAGG TGTTGACATT ATCGAAATAG GACGACCCCA AGAAGCCCGT CCACCTCACC
GCCGTCATGG GTTACAAGGC CGGTATGACT CACATTGTCC GTGACCTCGA CCGACCCGGA
TCCAGTGCGT ATTACTGTCC GATTGTCATC AAAACGTGGT CTGACAAAAT TTTGCAGAGA
TGCACAAGAG GGAGGTTGTT GAGGCCGTTA CCGTCATTGA GACCCCCCCT ATGGTCGTTG
TCGGTGCTGT CGGTTACGTC GAGACTCCTC GAGGCTTGAG GTCTTTGACC ACTGTTTGGG
CTGAGCACCT CAGTGACGAG GTTAAGAGGC GATTCTACAA GTGAGTATTG TTTTTGAATA
CTCATCGGAG CAGCTTTTAA CGAAGTTTGC AGGAACTGGT ACCGATCGAA GAAGAAGGCA
TTCACCAGGT ACGCCAAGAA GCACTCTGAG AACTCCGGCG CTTCCGTTGC CCGAGAGCTT
GAGCGAATCA AGAAGTACTG CACTGTTGTG CGAGTCCTCG CCCACACCCA GATCTCCAAG
ACTGGTCTCC AACAGAAGAA GGCCCACCTT ATGGAAATCC AGGTCAACGG TGGTTCCGTC
GCCGACAAGG TTGACTTCGC CAGGTCTCAC TTCGAAAAGA CCGTCGACGT CGGCTCTGTC
TTCGAGCAGG ACGAGTGCAT TGACATCATT GGTGTTACCA AGGGTCACGG TTACGAGGGT
GTTACCGCTC GATGGGGTAC TACCCGTCTC CCCAGGAAGA CGTGAGTTAT TTCATGAATT
TTATAAACAT GGCTGACACA TCCATAGTCA CCGAGGTCTC CGAAAAGTTG CCTGTATCGG
TGCTTGGCAT CCTTCCAACG TCATGTTCTC CGTGGCTCGT GCCGGTCAGC GAGGTTACCA
CTCTCGTACT TCGATGAACC ACAAGATCTA CCGTATCGCC AACGGTGCTT CTGGTTCTTC
AGGCTCTACT GAGTTTGACC TCACCAAGAA GGACATCACC CCCATGGGTG GTTTCGTTCG
ATACGGTGTT GTCAAGAACG ACTTCGTCAT GATCAAGGGC ACTTGCGTTG GCCCCGTCAA
GCGAATCGTC ACCCTCCGAA AGGCTCTCCG AACTCACACT TCTCGTGCCC ACACCGAGAA
GGTCACCCTC AAGTTCATTG ACACCTCCTC CAACTTCGGC CACGGTCGAT TCCAGGATGC
CGCTGAGAAG AACGCCTTCC TCGGTCAGCT CAAGATCAAG TCTGACGCTT AAGCTGGTTG
AGAAAGTAGA GGGGATGGAT GGGAAAGAAG TTGGAGTTGG GCCGGGATGT GGCCGACTGT
ACCATCATGA GCGGCTATGC ATATCATACC GTTG
|
|---|
| Protein sequence | MSHRKYEEPR HGSLAFLPKK RAARHRGRCK AFPKDDPKKP VHLTAVMGYK AGMTHIVRDL
DRPGSKMHKR EVVEAVTVIE TPPMVVVGAV GYVETPRGLR SLTTVWAEHL SDEVKRRFYK
NWYRSKKKAF TRYAKKHSEN SGASVARELE RIKKYCTVVR VLAHTQISKT GLQQKKAHLM
EIQVNGGSVA DKVDFARSHF EKTVDVGSVF EQDECIDIIG VTKGHGYEGV TARWGTTRLP
RKTHRGLRKV ACIGAWHPSN VMFSVARAGQ RGYHSRTSMN HKIYRIANGA SGSSGSTEFD
LTKKDITPMG GFVRYGVVKN DFVMIKGTCV GPVKRIVTLR KALRTHTSRA HTEKVTLKFI
DTSSNFGHGR FQDAAEKNAF LGQLKIKSDA
|
|---|
| |