Gene CNK01970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK01970 
Symbol 
ID3254467 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand+ 
Start bp584820 
End bp585942 
Gene Length1123 bp 
Protein Length305 aa 
Translation table 
GC content49% 
IMG OID638253690 
Productconserved hypothetical protein 
Protein accessionXP_567759 
Protein GI58260698 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.337722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCA GCACACCTTT ACTTAGTCGG GGAACCCTAA TTAAGCAAGG CGCAGAAGCC 
GTACGTAACG ACTCCCATTT CCTTCAGGGC CTCTCTCACA CTTGACTACA GAAAGTCTAT 
GCTCTGCCAT CATTGTTTCC GGAACCAACG ACATATCACC CTGGCTCTTC CTCTTCCTTC 
TCAGCTGCTT CTCCTACCCC GGTCATCTTG AAACACCGTT TCACTAAGAC TTATCGACAC 
CCTACGCTTG ACGCCTATCT CACTTCTCAG CGCCTTACTT TTGAAGCTAG GGCCCTTGCC 
CGGGCGGCTA AAGCTGGAGT CACCGTACCG AAAGTTGTTT GGGTAGACGA AAAAGCTGGG 
GTTATTGGTA TGGAAAGAAT AGAAGGTTGG AGCGTGAGGG AAATTCTTGG AGGAGGGGCT 
GAGGGTGAAG TAGAGGTGAT AGAAGAACAA GAGATCGAAG AAGATGTTGA AAATAAAGCT 
GAAGATTCAG CAGTCCGTGA GGAACCCGAA GGTCCAGAGA GCGAGGGTTT GAAAGCGCTA 
AAGAATTTGG GTGTGACCCA AGGTGAGTTC TCAAGCTCTA CAATTTCTGT TCGCAAAGCA 
TCGACTAAAT CGATCCTAGA ACATCTCATG AGATCCATTG GGGCCGCTCT CGCACGATTG 
CATAAAACCA TGATCATTCA TGGCGACCTG ACGACGTCCA ATATGATGGT ACGTTTGACA 
CCAGGAGGAT CAGGTCCGTA TGAGATTGTA AGACTTTTCT ATCGCCCCGC GACCTGCAAT 
GGTCCATCAA GCTTATGATG GTCCAATGCA GGTTTTGATA GATTTTGGCC TGTCATCCCA 
AGCGCAGTTC CCTGAAAACT ACGCAGTGGA TCTCTACGTC TTGGAGAGGG CTTTTGCCTC 
TACGCATCCG AGATCGGAGA AGCTTTACGC TGGCGTTCGT ATATTTTCGT CAACTTTCGG 
TTTTTCACGT GTGCTAATGG TCGCAGGTCC TCGAAACTTA CGCGGAAGGA CTCGGAGAAA 
AGAAATGGAA GCCTATCCAG ATCAAATTGA AAGATGGTCA GTGCTTTTGC AGATAATGCG 
TGGTCAGACA AGCGACAAAT TTGCTGACGA GACGATGCAG TGA
 
Protein sequence
MAASTPLLSR GTLIKQGAEA KVYALPSLFP EPTTYHPGSS SSFSAASPTP VILKHRFTKT 
YRHPTLDAYL TSQRLTFEAR ALARAAKAGV TVPKVVWVDE KAGVIGMERI EGWSVREILG 
GGAEGEVEVI EEQEIEEDVE NKAEDSAFSS STISVRKAST KSILEHLMRS IGAALARLHK 
TMIIHGDLTT SNMMVPYDGP MQVLIDFGLS SQAQFPENYA VDLYVLERAF ASTHPRSEKL 
YAGVRIFSST FGFSRVLMVA GPRNLRGRTR RKEMEAYPDQ IERWSVLLQI MRGQTSDKFA 
DETMQ