Gene CNK01900 details

Gene Information

• Locus tag: CNK01900
• ID: 3254546
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: -
• Start bp: 564354
• End bp: 568087
• Gene Length: 3734 bp
• Protein Length: 873 aa
• GC content: 47%
• IMG OID: 638253683
• Product: conserved hypothetical protein
• Protein accession: XP_567669
• Protein GI: 58260518
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0038] Chloride channel protein EriC

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00397821
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGAGCTA CGGACAGCCC ACGGCGAACA CCAAGCATGC CTCGGCAGCA GTCAGAGGAT 
GAACTTAGAA TACGTGGACA AGCACCACGC TCTCCCCGAA GCTCCCAAGG CGACCCGCTT 
GAAAGAAACT CTAAGCTCGA AGACGAAGAA GAACTGGATC TTATTAGGTG TGGTATCCGC 
CAGTTGATGA TGACAACGCT GACCCATTTT CCATAGACGA TATGAAGATT TTAGCACAGT 
AGGCAAGTGC ATCGTGCATC CTCTCCTCTA CGAATAACTC TAACACTGTC ACACCAGATT 
GGATTCAAGA TTCATTACAT GAACGGACAT TTCAAAACAA GGCTCCTCGG AGTCGAATTA 
TAGCTCAGCT GGATCGTAGT GATGGCGCCG TAGGCCATCT GTGGAGGTTG ATACGTAGGG 
CCTTGGAAGA GGGAGAGGCT TACGTGGTGA TTTCACTTGT CGGTGTGTAT TAAAACATTC 
TAGAGTTCCC CCGATAATGA CCGTCCTGTA GGCGTCATAA TTGGTGTCAG CGCAGCACTC 
ATATCCATCA TAACAACATG GCTCTCGGAC ATCAAGATGG GCCACTGTAC TACGGGATGG 
TGGCTTACCC GGAAGTTCTG TTGTTTGGAG GTTTCAGATG AGATGGAAGC GTGTGCCGAA 
TGGAAGAACT GGGGCGGAGT GGAACCATTT CAATGGATTG CATATGTGCT GTTTGCTGTA 
AGTATCTATT CACAGCCAGC AACCGTTTCT CTTGTGCTAA CAAAGTCTAC CGCATTAAGG 
CTGCATTCTC TTTCGCAGCT GCATACTTGG TGAAGAACTT TGCTCCTTAT GCTGCAGGAT 
CGGGTATCTC GGAGATCAAA TGCATCTTGG GCGGGTTCAT TATCAACGGC TTCTTGAGTG 
TCGAGACTTT TTTCATCAAA GGACTGACTT TGGTAAGAGT TAGCCTTGAA GATTAACTAA 
CCTCCATCGC TGATCCGGAT CGTGTAGCCG TTAGCCATCG CTTCAGGTCT AGCGGTTGGA 
AAAGAAGGGC CTTCAGTCCA TGTAGCTTGT AGCGTGGGTA ACGTCGTCGC AAAATGGTTT 
AGCCGTTATG AGCGCAGTCA TTGTAAGTTA TGACTTTACT TGTCCCGGTA TGTACTCATC 
CACCTTTCAA AGTGAAGATG CGTGAAATCG TTACTGCTTC AAGCGCGGCG GGTGTAGCCG 
TAGCCTTTGG CTCACCGATC GGCGGTGTCC TTTTCTCAAT TGAAGTACGT GCGATCAGAC 
TATGAAGATG CTAGCTGGCT AATCCTGTGG CTTTAGGAAA TGAATCAGAC TTACTCCAAT 
AGGACTATGT GGCGAAGTTT TGTCTGCGCT TTGGTAGCAA CTTTCACTTT GGCTGTACGT 
CATATCTTTG TCTCCCGTTG CAGTACCTTC TGATGGTGTG TCACATCGCA GTCAATGGAT 
CCCTTCCGAA CTGGGAAGCT GGTCATTTTC AATGTTTCGT ACGACCGTGA CTGGCACTAC 
TTTGAGATTC CTGCATACAT TTTGATTGGT ATATTTGGTG TAAGCCGGCA ACCGCGCCTC 
TCCATTCCGC CATATAAGCT AAATGAAAGC TATAGGGTCT ATATGGTGCT TTTGTGATAA 
AATTCAACGT TCAAATGGCC TCTTTCCGTC GCAAGCACCT CAGTGGACAT GGCATTTTCG 
AGGCAGTGGC CTTGGCCTCT ATCACTGCCA TTATCGGATA TCTGAACGGC TTTTTACGTA 
TTGATATGAC TGAGATGTTG TCAGTGTTGT TTAGAGAGTG TGAAGGTGGT GGTGATTATA 
ACGGTCTTTG CCAGTGGGTG TTGCTTTTTG CGGTAGGCCT TGTAGTGCAG TCTTTACTCA 
CCGTACCTAT AGGGCATCTT CACAATGGCG CATGGTCAAC TCCCTTTTAC TAGCGACTAT 
CATCCGAACA GTCTTCATCA TCGTTTCATA CGGTTGTAAA GTTCCCGCCG GTATATTTGT 
CCCATCAATG GCTGTCGGTG CCACATTTGG GCGAATGATT GGTATTTTGG TCAAGGCAAT 
GTATAAGTGA GCTATCGATG ATTATCCAAG GGTTTTAGCG ACTGACAACG CAAACAACAA 
AGCTCCTACC CTTCTGCTCC GTGGTTTGCT GCTTGTGCTC CTGACGCGCC GTGTATCACG 
CCGGGTACAT ATGCATTTTT GGGAGCAGCG GCAGCAATGG GGTAAGTACA GGTCACGTTT 
ATGAACTGCT GATTTCGTCG CTGATAAACG ACGCAGAGGA ATCACCAGAT TAACTGTAAC 
CGTCGTTGTC ATCATGTTTG AACTCACAGG CGCTTTGACC TATATCCTGC CTGCTATGGT 
GAGACACTTC AGATTATATT CGAGATGTAT ACGCTCACCC CTTTATCTAG ATTGTTCTTC 
TGGTTACCAA GGCCGTCAGC GACCAGTTTG GTGGTGGAGG TATCTCCGAT CATATGATTA 
AGTTTAATGG ATATCCTTTC TTGGAGAAAG AAGATAAAGA GGACCCAACG GACCACGCGT 
TCATTGAGCC TAGTGAGTCG CACCACCCTT ATTCAGTAAA TGCCGATGTT AAAGTCCTGT 
TTGCCTAGTC GCCAATGTCA TGAAAAAGGA TCTCATCATA TTAGAGGCGA CAGGTGTGCC 
CTTGAATCAT GTTGGTAAGC GAACACGGAT AGCTTTTAAA TTGCAGCGCC TGATGAGCGT 
GTAGTCGATA TTGTCCAACA CACAAATTAC CAAGGATTCC CAGTTGTCAA GAGCCATGAG 
GATCAAACCA TTGTCGGCTT TGTTCGTAAA AATGAGCTTC GTATTGCTCT TGAAAAAACT 
CGTCGCGTAC GAAATTTATC TTTCAACACG ACCTGTACTT TCCAATGCAT TAGGGCTATC 
CCAGAGGATG CTCATGAGCT TCTAGAAAGG CCAGATATTC TTATACCAAG CCAAGGGGGG 
ATAATGACTG TGAATACGGG CGCTGAGAAT AGAGAAGATA ATGGAAGTGA AATATCTCAT 
GTCGACTTTG GGCAGTATGT CGATGATGTG AGTACGAACT TGAAAAGGGT GATCGGAGTC 
TGACAATACG GTGGTCAAGA TACCGCTGAC TGTAGCACCA AAAATGCCAT TGGAACTTGT 
AATGCAGCTT TTCAGGCGTA TGGGGTGAGT ATCAGTTCCC ACTACGTTAG AGCCCTGCCG 
TTAATGCTCC TTTTAAGACC TCGCGTCATT CTCGTGTCCG ACCAAGGTCG ACTCACTGGG 
CTTGTGACCG TGAAAGACGT CTTGCGTCAC GAACTTTCCG AGGCACATCA TCGATCTCGT 
TCAACCCATA CACCACTCAC ACCATCTCAT CCTGCGTATG CCCAGTCTAA TGGATGGGAT 
ACAGAATGGA CGGTAGACGA TGAGAGAGGC CATGGCTTGG AGATTGCATT GGAAGAAGGC 
TTGGAGTGGA CAAGATCAAA GGCCACTTGG GCTTACGGAG CTGCTTTGGA GCGTTGGAGA 
GGTATCAGAG GGCAGGACAG ACGGACGGCG ACCTTCGACT ATGAGTTGGA CGAAGGAATA 
CAAGGATGAT TAAATTTTGT TAGACTGACC AGTATCCCGT GTGCAACATT TTTGGAACCT 
TTGCATGAAT ATCAATCATC TTCAAGATCA TTCATCCCAT CTCCTTAGGA CTGTGGATTG 
ACACCAATGG AGTGACTCAA AAAACTGTGT CAGTGGTTCA TAACGACTAT ACATTGACTA 
CACTACATTA TTTC 

 

Protein sequence

MPRQQSEDEL RIRGQAPRSP RSSQGDPLER NSKLEDEEEL DLIRRYEDFS TVDWIQDSLH 
ERTFQNKAPR SRIIAQLDRS DGAVGHLWRL IRRALEEGEA YVVISLVGVI IGVSAALISI 
ITTWLSDIKM GHCTTGWWLT RKFCCLEVSD EMEACAEWKN WGGVEPFQWI AYVLFAAAFS 
FAAAYLVKNF APYAAGSGIS EIKCILGGFI INGFLSVETF FIKGLTLPLA IASGLAVGKE 
GPSVHVACSV GNVVAKWFSR YERSHLKMRE IVTASSAAGV AVAFGSPIGG VLFSIEEMNQ 
TYSNRTMWRS FVCALVATFT LASMDPFRTG KLVIFNVSYD RDWHYFEIPA YILIGIFGGL 
YGAFVIKFNV QMASFRRKHL SGHGIFEAVA LASITAIIGY LNGFLRIDMT EMLSVLFREC 
EGGGDYNGLC HAVFTHRTYR ASSQWRMVNS LLLATIIRTV FIIVSYGCKV PAGIFVPSMA 
VGATFGRMIG ILVKAMYNSY PSAPWFAACA PDAPCITPGT YAFLGAAAAM GGITRLTVTV 
VVIMFELTGA LTYILPAMIV LLVTKAVSDQ FGGGGISDHM IKFNGYPFLE KEDKEDPTDH 
AFIEPIANVM KKDLIILEAT GVPLNHVVDI VQHTNYQGFP VVKSHEDQTI VGFVRKNELR 
IALEKTRRVR NLSFNTTCTF QCIRAIPEDA HELLERPDIL IPSQGGIMTV NTGAENREDN 
GSEISHVDFG QYVDDIPLTV APKMPLELVM QLFRRMGPRV ILVSDQGRLT GLVTVKDVLR 
HELSEAHHRS RSTHTPLTPS HPAYAQSNGW DTEWTVDDER GHGLEIALEE GLEWTRSKAT 
WAYGAALERW RGIRGQDRRT ATFDYELDEG IQG