Gene CNK01540 details

Gene Information

• Locus tag: CNK01540
• ID: 3254555
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 453576
• End bp: 455605
• Gene Length: 2030 bp
• Protein Length: 537 aa
• GC content: 49%
• IMG OID: 638253642
• Product: conserved hypothetical protein
• Protein accession: XP_567828
• Protein GI: 58260836
• COG category: [C] Energy production and conversion
• COG ID: [COG0277] FAD/FMN-containing dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.527687
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGCCCGCTCA TCACTCTTAC TACCAGCTAT TTATTTGGCA CCGGACTCTT ACCACGTCCA 
TTCCACCCCA CCCAGCTAAA ATGACAGCCC CTAGGATTAT CTCACGCATC GCCGCCCGGA 
CCCTCCGGCG TTCACCTCTC CACCCCCTGC CCAGGAGCGC TCTCGCCCCA GCAAAGCTCT 
CTCCTACGGC CTACACCTCT GTCCGACTCG GCTCGACTCT TCCCCCTCGT GCGGACTTCA 
CCAAGCCTAC CGAGGAACAC ATCAAGGAAC TCCGCGCCCT CTTATCGTCT AACACCTCTC 
TAATCTCAAC CATCGACGGT TCTGCGAGTC CCGATGATTT GCAAGCCTTT AACGACGATT 
GGATGAACAA ATATCATGGC AAGGGTCCCA TCGTTGTCAA ACCTAAAACC ACAGAGGAGG 
TCAGCAAGGT CATGAAGTAC TGCTATGACA AGGGTTTGGC TGTTGTTCCT CAAGGTGGTA 
ATACTGGTCT TGTTGGTAGG TGCAATATTT CATCAGGTTC CTTTATAACC CGCTAATAAG 
CCCCCTAAAA ACAATAGGTG GCTCTAACCC CGTACACGAC GAAATCATCC TTAACCTCTC 
AAATCTCTCC CAGATCCGTT CATTTGACCC CGTCTCGGGT ATTTTTGTCG CTGATGCCGG 
CGTTATTCTC GAAGTTGCCG ATAACTACCT TGCCGAACAA GGCTTTATCT TCCCTCTCGA 
TCTCGGTGCC AAGGGGTCAT GTCACATCGG TGGTAACGTC GCTACCAATG CTGGCGGTTT 
AAGGTTGCTG AGGTACGGAA GCTTGCACGG TACCGTCCTT GGTCTGGAGG TTGTTTTGCC 
GGACGGAACT ATCTGGAACG GCTTGAGCAA GCTCAGGAAA GATAACACTG GTAAGTCGTA 
TTTACCAATC AAGATGCAAT GAAATCTTAC TTTTGTCATA GGCTTCGACA TCAAGCAGCT 
CTTCATCGGC TCTGAAGGAA CTATCGGGAT CATTACTGCC ATCTCAATCC TTTGCCCTCG 
TCGTCCCTCA GCCATGAACG TTGCTGTTTT CTCCTTGCCT TCCTATGACG CCGTCCAAAA 
GGTTTTTGGT GAAGCCAAGA CTTACCTCGG CGAGATCCTT TCTGCTTTCG AGTTCTTTGA 
CAAGCAAAGT GTGAGTCGGC CAATGAGGTA TCTTTTGATG AAGCTAATTA TTCGAAATAG 
TACGCTCTTG TCAAGAAGCA CCAAGAGGAA AACGGCGAGA CCCGTAGCGT CTTTGAGCAA 
GAAGGTGATT TCTACTGTTT AATCGAGACC GGTGGTAGCA ATTCTGAACA CGATGAGGCT 
GTACGTGTCT TTCCCTTTTT AATCCATCAA ATATGCTTTG TTAATGTCAA GACTTGTAGA 
AACTCACCGC CCTTCTCGAA CACCTCCTCA CTTCCGATCT CGTCCTCGAC GGTGTACTCG 
CCCAGGACTC TACGCAATTC CAGTCCATCT GGTCCCTTCG TGAACTCATC CCCGAGTCTG 
CGGCCAAGGC TGGATCAGTA TACAAATACG ATGTGTCCGT CCCTGTGGGC AAGATGTATG 
GTTTGGTTGA GAAGATGAGG GAAAGACTCA GGAAGGAGGG TGTTCTTGAG GGTGATGGCA 
ACCCTGAAGG GCCTATCAGA GCTGTCGCGG GCTACGGACA CATGGGCGAT GGTAACCTTC 
ACATCAACAT TGTCGCCAAC AAGTACACTG AGGAGATTGA AAAGGTCATT GAGCCTTATG 
TTTACGAGAT CGTCGGTGAG TATTCATTCT GTCTCTGCCA TTGAGCGCAG ATCTAATCTT 
ACTTTTCAGC TGAGAATGAG GGCTCCATCT CTGCGGAGCA CGGTTTGGGT GTCATGAAAG 
CCCCTTACAT CGGTTACTCA AAGAACGAGA CATCTATTGA AGTCATGAAG AAAGTCAAGC 
ACCTGTTCGA TCCGAAGGGC TTACTCAACC CTTACAAGTA CATCGTTTAA GACTATGCTA 
GTCCTTAAAT CAAATCTTGG GAGCTCTCAT GCAAACATTT AATCTTCGCG 

 

Protein sequence

MTAPRIISRI AARTLRRSPL HPLPRSALAP AKLSPTAYTS VRLGSTLPPR ADFTKPTEEH 
IKELRALLSS NTSLISTIDG SASPDDLQAF NDDWMNKYHG KGPIVVKPKT TEEVSKVMKY 
CYDKGLAVVP QGGNTGLVGG SNPVHDEIIL NLSNLSQIRS FDPVSGIFVA DAGVILEVAD 
NYLAEQGFIF PLDLGAKGSC HIGGNVATNA GGLRLLRYGS LHGTVLGLEV VLPDGTIWNG 
LSKLRKDNTG FDIKQLFIGS EGTIGIITAI SILCPRRPSA MNVAVFSLPS YDAVQKVFGE 
AKTYLGEILS AFEFFDKQSY ALVKKHQEEN GETRSVFEQE GDFYCLIETG GSNSEHDEAK 
LTALLEHLLT SDLVLDGVLA QDSTQFQSIW SLRELIPESA AKAGSVYKYD VSVPVGKMYG 
LVEKMRERLR KEGVLEGDGN PEGPIRAVAG YGHMGDGNLH INIVANKYTE EIEKVIEPYV 
YEIVAENEGS ISAEHGLGVM KAPYIGYSKN ETSIEVMKKV KHLFDPKGLL NPYKYIV