| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK01420 |
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| Symbol | |
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| ID | 3254584 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006680 |
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| Strand | + |
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| Start bp | 414785 |
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| End bp | 417013 |
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| Gene Length | 2229 bp |
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| Protein Length | 590 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 638253631 |
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| Product | threonine ammonia-lyase, putative |
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| Protein accession | XP_567820 |
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| Protein GI | 58260820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00537189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCTATTATT CGATGGCGCC CACACCGTGA GTCTCCACCG CCCACGCCCG CTCACGCCGC
AGCATCCCCG TCCCCGCCGC CCGCCCGGCC GCCAGCCACC TCTCCAAGTC GCCGCCGACG
ACCAACGAGT ACACCTCCAC CGCGCCCATC CCCGCCCTCC CGCCGCAGCA CACGGACGAG
GGCGTCCCCT CCCACCTCTA CCAAGGCCTG CCCGCCCATC TCCTGATCGA CGATGCCCAG
GGACAAAAGG TCCCCGACTA TCTCAGGATG ATCCTGATGT GTGAGTCGTC GCCTTGGCCG
CACCAGCGCT GACCCGCCCC AGCCAAGGTC TACGCCGCGC CCCTCAACCT CAAGGAAACC
CCTCTCACAT ATGCAGCCAA CCTCTCCGCC CGGCTCGGCA ACGAGGTGCG TCCGTCGCCG
CACAGGCACT ACATGCACTC ACGCTCCGCA GATCTGGATC AAGCGGGAGG ACCTCCAGCC
CGTGTTCTCA TTCAAGATCC GCGGCGCCTA CAACATGATG GCCAGTCTGT CCGACGAAGA
AAAGAAAAAG GGCGTCATCA CGTGCTCCGC CGGTACGCCC CTGGTCTATG AACAATCCTC
TATTGCACTG ACACCCACCA GGCAACCACG CCCAGGGCGT CGCCCTCTCC GGCCACGCAC
TCAACATCCC CGCCATCGTC GTCATGCCCG TCTCCACCCC GTCCATCAAG TGGCGCAACG
TCCAGCGTCT CGGCGCCACC GTCCTCCTCC ACGGCCGCGA CTTTGACGAG GCCAAGGCCG
AGTGTCTCCG CCTCGAAAAG GAAAAGGGCC TGACCTTTGT GCCCCCGTAC GATAACCCCT
ACGTCGTCGC CGGCCAGGGA ACTGTCGCCA TGGAAATCTG CCGCCAAGTC ACAGATGCCG
ACCAGATCGA TGGCATATTC GCTTCCGTCG GCGGAGGCGG CCTTGCGGCC GGTATCGCGG
CGTACATGAA GCGAGTCGCC AAGCCCAGTG TCGGAATCTA CGGTGTCGAG ACCGTTGACG
GTGATGCCAT GGACCGCTCA CTCAAGGCCG GCAAGAGGGT CCTCCTCGAT GAAGTCGGCC
CGTTTGCAGA CGGTACCGCG GTAAGGCTTG TCGGCGAAGA ACCTTTTCGC GTATGCAAAA
ACTTTTTGGA CGACGTCGTG CTTGTCAACA ATGACGAGAT TTGCGCCGCC ATCAAGGATG
TCTTTGAAGG TGTGTCCCTT TTTTCTTTTT TATTTACCCT CTAATCCCAG GCAGAAACCC
GATCTGTCCC CGAACCGTCC GGTGCCCTCG CACTCGCAGG CCTGAAAGCC CACATTATCC
GAAACAACCT CCAAGGCGCC GGTAAACGCT TTGTCGCCGT CATCTCCGGC GGTAACATGA
ACTTTGGCCG ACTCCGATTC GTCGCTGAGC GAGCGGATGT CGGCGAACGA CGAGAAGTGC
TGATGAGTGT CCGAGTGCCC GAAAAGCCTG GCAGGTGGGT TCTTTTCTCT TCTGCGTCGT
CACAAAAGTC CTGAGTGGAG ACAGCTTTTT GAAATTCCAC TCCCTCCTCG GTTCACGCGC
AGTCACCGAG TTCTCCTACC GCCACTCCAA CAATTCCACC GGCTACATCA TCTGCTCCTT
CCTCCTCTCC TCCTCATCCT CTTCGTCCTC CGGGCCCTCA CCCGAAGCGC GCGCAAACGA
GATTCACGAG ATGGTCGAAT CGTTTAAACA GCATGGGATC GAAGCCGTCG ATTTGAGCGA
GGATGAGTTT GCAAAGAGTC ATGTGAGGCA TCTGGTCGGT GGACGCAGTG CCGTGGAGCA
CGAAAGGATC TTTAGGTTTG GTGAGTCCGT CTCATCCTCT TTCACATTTT CATCGCTGAC
CACTTGGCCT TTGTACAGAG TTCCCGGAAA GACCTGGGGC ACTTGGAAAC TTTTTAAAAG
GTATGAAGGT CGAATGGAAT ATCTCCATGT TCCATTACAG AAACCACGGT GCCGGTGCGT
CCCCTCCTTT TTCGCTACTA GACGTATTAA AAGCTAAAAC ATTTCGTTGA TAGACGTCGG
CAAAGTCCTC ATCGGCGTCC AAGTCCCGTC CCAGGACAAC CCCGCATTTG ACGAGTTTTT
GGAAAAGCTG GGATATCCAT ATGTCGAAGA GACCCATAAT GAGGTTTACA CCATGTTCCT
CAGGTCGTAA AAAAAAAGAC TGTTCTGGTG AACAGAGATA TATAGAGTCG GAAAACACGC
GCCATTCAT
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| Protein sequence | MAPTPIPVPA ARPAASHLSK SPPTTNEYTS TAPIPALPPQ HTDEGVPSHL YQGLPAHLLI
DDAQGQKVPD YLRMILMSKV YAAPLNLKET PLTYAANLSA RLGNEIWIKR EDLQPVFSFK
IRGAYNMMAS LSDEEKKKGV ITCSAGNHAQ GVALSGHALN IPAIVVMPVS TPSIKWRNVQ
RLGATVLLHG RDFDEAKAEC LRLEKEKGLT FVPPYDNPYV VAGQGTVAME ICRQVTDADQ
IDGIFASVGG GGLAAGIAAY MKRVAKPSVG IYGVETVDGD AMDRSLKAGK RVLLDEVGPF
ADGTAVRLVG EEPFRVCKNF LDDVVLVNND EICAAIKDVF EETRSVPEPS GALALAGLKA
HIIRNNLQGA GKRFVAVISG GNMNFGRLRF VAERADVGER REVLMSVRVP EKPGSFLKFH
SLLGSRAVTE FSYRHSNNST GYIICSFLLS SSSSSSSGPS PEARANEIHE MVESFKQHGI
EAVDLSEDEF AKSHVRHLVG GRSAVEHERI FRFEFPERPG ALGNFLKGMK VEWNISMFHY
RNHGADVGKV LIGVQVPSQD NPAFDEFLEK LGYPYVEETH NEVYTMFLRS
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