Gene CNK01140 details

Gene Information

• Locus tag: CNK01140
• ID: 3254400
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006680
• Strand: +
• Start bp: 342892
• End bp: 345104
• Gene Length: 2213 bp
• Protein Length: 640 aa
• GC content: 49%
• IMG OID: 638253604
• Product: capsular associated protein
• Protein accession: XP_567800
• Protein GI: 58260780

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCTTCGCTT TGTTTCTTCA TCTACATCTC TCCATTCCCA CGCCATGCCT AAGGGCACTT 
ATCCCAGAAC GCGCATAGCT GTTACAGCGG GATTGGCTAT CTCTTTCCTT TTCCTCCTCC 
ACTTCCTCTT CTCCTCTCCT GACCGACTCC TGGCGACGCA GAGATGGACG ACTGCTTCTT 
CTTCCGTCAT TCGTTCAAAG TTCCTTCGAG CAAAGGCCCA AGCCCCCAAA CCTCCCATAC 
ACCATCCTAT TCCCAAGCTC ATGGCAGACG CCAGGAATGA GTTTGACCAA AAGCTCAAGA 
AACAAAGCAA GAGCTTGCCC GAAGCCGTTG CCGAGTACAA GAAGAGGTAC GGGAGAAATC 
CTCCGAAGGG CTTTGATGAA TGGTACGCGT TTGCGAAGGA GAACAATGCC GTCATCATCG 
ACGAGTATGA CCAGCTTGAT CGTGATCTCA AGCCCTTTTG GCTCTTCTCT GGCCAGGAGT 
TGCGACGAAG ATGTGTCCAA GTCGGTTTCT TGCCTTCGGT CGATTTGGTG AGGGTTGAGA 
AGGGTCAAAC AAGAACTATC GATGTGTCAA AGGGCTTCGA TGACTCTGAA GTTGGTGCCC 
GTGCCAAGGG TTTCCGAGTC ATGCTTGAAA AGTTTCAAGC AAAGCTTCCC GATATGGATT 
TCCCCATCAA CGAAAAGGCG GAAGGACGTA TTCTCGTGCC TTGGGAGGAA AACTTATACT 
CTAACCTCAC AGCTGATTCT TCTCGTAAGA TTTATCTCTG AATTTTACCT GTTTATTCGC 
TGACTCTTTC GTAGTTGGTA TTGAACACGT CTTGGGCGGA GAATTCATTC CCGATTGGCG 
AGGTGATGGT AACGTCTGGG AGGCGTACCG CCGAACTTGT GAACCTTCAT CTCAAGCCCG 
TCGTCTGTTT GGTTCTCTCC GTGCCAATCT CAAAGAAGGT CAAGCTCCCG TCTCTCGTCT 
CGCCGATGCT GGTGTGACTG CCGACGCTCC TTCTGAAGAC TTTTTCTTCC CCCAAAGTGT 
CGACGACAAA TACGACTTTT GCGCTCACCC CTGGGCTCAT TATAATCAAG GCCATTTCTT 
CTCCGATTGG CGGACTATCC ATGCTCTTTA CCCCATGTTC TCTCCAGCCA AGGGTTTGGG 
ATACAGCGAC ATTCTTATTC CCAGTCACTA CTATTTCTCC TCCACTAAGC GATACACTTA 
TGGTTGGGAT CCTGTCAACA TGGTTATTAA GGACGTCGAT GACATGGAGA CTAAGTGGGA 
GGACAAGTCT GACGACATAT TCTGGCGTGG TGCCACTACT GGTGGCGGTT CTTCTCCTCC 
CGGTTTCCTT GCTCAGTACC AGCGTCACCG ATTGATTAAG ATGACCTCTG ACTCTTCCAA 
TGTCAACAAA ACTGTCGTTT TCGCCGATCC TCCCGGAACT GACCACTTCA TCTCTGCTCA 
AGTGCCTATC GGGCAGCTGA ACAAAGATAT GATGGATGTG GCGTTCACAA AGGCAGTCGG 
TTGTACCCAA TACCCCGGAG GATGTGACGG TATGCGAAAG GACCACCGAT TTGCCGATGC 
TGTCCCTCTT GGTGAGAACT GGAGACACAA GTATTTGATC GATATCGACG GTATGGGTTA 
CTCTGCCCGT CTTTTTGCTT TGGTGCGACT CCTTTTTCAT ATCTAGAAAT GTTAGTCACA 
ATTACTAACA GCAATCTTAG CTCAAGAGTG AAAGTGCTGT CCTCAAGTCT ACCGTCTACA 
CCGAATTCAT GTCCGAATGG CTCCAGCCTT GGCTTCACTA TATCCCCATC TCTCAAATGT 
ACCAGGAAAT TTACAACGTC CACGCCTTCT TCTCTGGCCC TTCGAAGGCT ATGCTTGATG 
CCTCCAACTC TACTAGAACT CTGTATCAGC AGCCTGGGGT TCACACCAAG AAATTTGATG 
GGGATGCAGA GTTGAGGAAG ATTGCCAAGG CGGGTAGGGA GTGGATGTTC ACTATTGGAC 
GAAAGATCGA CATGGAAAGT GGGTATCTTC CCCTTGGAGA TTATTTAATG TGGCTAACAA 
CACGTTTAGT CTACGTGTAC AGGTTGTGTC TTGAGTGGGC ACGTCTTATG GCTGATGACC 
GTGAGGCCAT GACCTACAAC GGATAGTGAT GCGTGCACAG GTTAGATTGA ATAAATAGAT 
GGTTCTTTTG GTGTCTTTGT ACAACAATGC CTCTAATGCA TTGCTATGTT TCT 

 

Protein sequence

MPKGTYPRTR IAVTAGLAIS FLFLLHFLFS SPDRLLATQR WTTASSSVIR SKFLRAKAQA 
PKPPIHHPIP KLMADARNEF DQKLKKQSKS LPEAVAEYKK RYGRNPPKGF DEWYAFAKEN 
NAVIIDEYDQ LDRDLKPFWL FSGQELRRRC VQVGFLPSVD LVRVEKGQTR TIDVSKGFDD 
SEVGARAKGF RVMLEKFQAK LPDMDFPINE KAEGRILVPW EENLYSNLTA DSSLGIEHVL 
GGEFIPDWRG DGNVWEAYRR TCEPSSQARR LFGSLRANLK EGQAPVSRLA DAGVTADAPS 
EDFFFPQSVD DKYDFCAHPW AHYNQGHFFS DWRTIHALYP MFSPAKGLGY SDILIPSHYY 
FSSTKRYTYG WDPVNMVIKD VDDMETKWED KSDDIFWRGA TTGGGSSPPG FLAQYQRHRL 
IKMTSDSSNV NKTVVFADPP GTDHFISAQV PIGQLNKDMM DVAFTKAVGC TQYPGGCDGM 
RKDHRFADAV PLGENWRHKY LIDIDGMGYS ARLFALLKSE SAVLKSTVYT EFMSEWLQPW 
LHYIPISQMY QEIYNVHAFF SGPSKAMLDA SNSTRTLYQQ PGVHTKKFDG DAELRKIAKA 
GREWMFTIGR KIDMEIYVYR LCLEWARLMA DDREAMTYNG