Gene CNK00980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00980 
Symbol 
ID3254410 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp304073 
End bp306055 
Gene Length1983 bp 
Protein Length467 aa 
Translation table 
GC content54% 
IMG OID638253588 
Productexpressed protein 
Protein accessionXP_567786 
Protein GI58260752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.442642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCG AAGTCGTGGT CATCAGCGAC GATGAATCTG ACCAAGAAAT CCACCTCGTC 
GCCTGTAAAC CTATCCTCTC GCACTCTCTA CCCGCCCTCG CTCCTGCCAG GTAGCGCCCA
TTTCCCAAAC CACAAACGTG CGAACAGATT GCTAACAATG ATGGGTAGCG CGGCAATAGT
GATCGACTCT GATTCGGAAG ACGGGATCGA CTCTGATTCG GAAGACGGGA TCGAGACGGA
CGATGACGAC GACGACGACG GGGAAAATCA AGATATCCTT GGGTTATTAA GTCAGATGGC
GGATCATTCG GGTTTGCGCG CACCGACACG TACGCAGAGC ACGAGCGTGC TCGAAACGTG
TCGTGCGAGG ACGGAGCGAG GTTCGAGCCG GACGTTTGCG GGTAGTATCT TATCCCAGGC
AGGTCCCCCC GTTGCGGCTT GTATCGATGG CCGAGCGCTG ATTTTTGGTT TCTGTTGATA
TTACCAAACA CTCGACTCGT GGCGTCTAGG TTGATTCGCT AGACAAGACA AAGTCAAAGA
AACGGGCCTC TTCAGGGGAT GACAGCAGCG TACAGAAACG GTCAAAGATT GACGATACTG
CATGTCTCTT TTTATATATA CAAAATCTAA AATTACTGAC CCATTAACTG AACCGAAACA
GAACGGCTTG ACAAGGGAAG AGATGGCGGC TATCAAAGCG AGTGAGAAAG AGGCGAAAGC
CGCGCAAAAA GCCAAGGAAA AAGAGGCTAG ACAGTTTGAA CGTGATACGG CCAAAGTATG
TCTCCATGCT CTTTTCCCCA AAAACCCTCT CCTTACACAT ATGTAGGCGG CGAAAGAAGC
AGAAAGGTCG TACCAGAGAA AAGTAGCCCA GGTCAACAAG GCAAGTTTAT ATCTCCCACA
CACGACACAG ATCTAATCAA CGGGGATCCA GCTCCGAACG TCAAAACAAG ATGCTCTCCG
TGAGATCCAC CTCTACCTCT CTGCCGACAT GTGCCTCCCT TCATCCCCTA TCGCCGGTGC
CCTCCCCGAA ATCCGCCACC GGATCCAAGA CTGTCAATCC GCCCTCTGTT TCCTCCCCGA
ACCCGATTCC CCCATCCCCG GCGCGATCCG GTTCAAGCGA CACCTCCAAG CGCGATGGGA
CCCCGGCTCA AAACGGTTCG TCCCGCTAGA CGATCCGCGA TGGGTATGGG AAAAGACAGT
GCTGGTGCTC ATCACGGCCG AAGAGTTGGT GGACAAGGTT GCAGATGGCG GGGATACGCT
CGGGCAATGG GCGTCGGACG TGCGGTTGTT ATTGGGTTTG GCGACGGGCG ACCAGGTGGT
GTTGATGATC AAGGGTCTGC AAAAGTATTA TTCGAAATCG CGGTCGTTGG CCAATAAGGA
TTATATAAAC GCCGCCCGCG CGGGTCTCGA GGGCGGGTCG GCGGCGACGG CGACGCCGAT
AACCTTTCGA CGCCCGACAA GGGAACAAAT CGAAGCCGAG ATGGTGAGAC TCCAAGTGGC
TGAACATTTC TTCCTCGTGC ATGTCGAAAA GACGGAAGAC GTCGAAGACT GGGTGTACAA
CATTGCGGCC GATATCGCGC TGAGACCGTA CAAACTGATC GCGAAATCGC ACCTCAATTT
CGCCCCGGCC GAAGGTTCCA GAAAAGCGTT ACAGCCGACG GCGGTGCTCG AGCTGATGTT
GCAGGAAGTA CAGGGGATCA CACCCTCCGC CGCGGCCGGG ATCACGGAAA AGTATCCGAC
GTTTAGGCGG TTGATGGAGG CGTTTGAGAT GGAAGAGCAG AGAGGGGGGA TCGAGAGGGC
GGAGATGATG TTGCAGTATT GTGAAGTGAG GAATTTGAAG AGCGGCCATG CGAGTGGCAG
GAATTTGAAC AAGGTGGGGG TTTTAAGATT TTGTGTTTTC TTATGACTCA CTTTATCAAC
TAGGCACTGT CGAAACGGGT TTACAATGCG TTCCGTGGAA CGGACAGTCT CTCTCTTGCC
TGA
 
Protein sequence
MQAEVVVISD DESDQEIHLV ACKPILSHSL PALAPASAAI VIDSDSEDGI DSDSEDGIET 
DDDDDDDGEN QDILGLLSQM ADHSGLRAPT RTQSTSNGLT REEMAAIKAS EKEAKAAQKA
KEKEARQFER DTAKLRTSKQ DALREIHLYL SADMCLPSSP IAGALPEIRH RIQDCQSALC
FLPEPDSPIP GAIRFKRHLQ ARWDPGSKRF VPLDDPRWVW EKTVLVLITA EELVDKVADG
GDTLGQWASD VRLLLGLATG DQVVLMIKGL QKYYSKSRSL ANKDYINAAR AGLEGGSAAT
ATPITFRRPT REQIEAEMVR LQVAEHFFLV HVEKTEDVED WVYNIAADIA LRPYKLIAKS
HLNFAPAEGS RKALQPTAVL ELMLQEVQGI TPSAAAGITE KYPTFRRLME AFEMEEQRGG
IERAEMMLQY CEVRNLKSGH ASGRNLNKAL SKRVYNAFRG TDSLSLA