Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00980 |
Symbol | |
ID | 3254410 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | + |
Start bp | 304073 |
End bp | 306055 |
Gene Length | 1983 bp |
Protein Length | 467 aa |
Translation table | |
GC content | 54% |
IMG OID | 638253588 |
Product | expressed protein |
Protein accession | XP_567786 |
Protein GI | 58260752 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.442642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGCCG AAGTCGTGGT CATCAGCGAC GATGAATCTG ACCAAGAAAT CCACCTCGTC GCCTGTAAAC CTATCCTCTC GCACTCTCTA CCCGCCCTCG CTCCTGCCAG GTAGCGCCCA TTTCCCAAAC CACAAACGTG CGAACAGATT GCTAACAATG ATGGGTAGCG CGGCAATAGT GATCGACTCT GATTCGGAAG ACGGGATCGA CTCTGATTCG GAAGACGGGA TCGAGACGGA CGATGACGAC GACGACGACG GGGAAAATCA AGATATCCTT GGGTTATTAA GTCAGATGGC GGATCATTCG GGTTTGCGCG CACCGACACG TACGCAGAGC ACGAGCGTGC TCGAAACGTG TCGTGCGAGG ACGGAGCGAG GTTCGAGCCG GACGTTTGCG GGTAGTATCT TATCCCAGGC AGGTCCCCCC GTTGCGGCTT GTATCGATGG CCGAGCGCTG ATTTTTGGTT TCTGTTGATA TTACCAAACA CTCGACTCGT GGCGTCTAGG TTGATTCGCT AGACAAGACA AAGTCAAAGA AACGGGCCTC TTCAGGGGAT GACAGCAGCG TACAGAAACG GTCAAAGATT GACGATACTG CATGTCTCTT TTTATATATA CAAAATCTAA AATTACTGAC CCATTAACTG AACCGAAACA GAACGGCTTG ACAAGGGAAG AGATGGCGGC TATCAAAGCG AGTGAGAAAG AGGCGAAAGC CGCGCAAAAA GCCAAGGAAA AAGAGGCTAG ACAGTTTGAA CGTGATACGG CCAAAGTATG TCTCCATGCT CTTTTCCCCA AAAACCCTCT CCTTACACAT ATGTAGGCGG CGAAAGAAGC AGAAAGGTCG TACCAGAGAA AAGTAGCCCA GGTCAACAAG GCAAGTTTAT ATCTCCCACA CACGACACAG ATCTAATCAA CGGGGATCCA GCTCCGAACG TCAAAACAAG ATGCTCTCCG TGAGATCCAC CTCTACCTCT CTGCCGACAT GTGCCTCCCT TCATCCCCTA TCGCCGGTGC CCTCCCCGAA ATCCGCCACC GGATCCAAGA CTGTCAATCC GCCCTCTGTT TCCTCCCCGA ACCCGATTCC CCCATCCCCG GCGCGATCCG GTTCAAGCGA CACCTCCAAG CGCGATGGGA CCCCGGCTCA AAACGGTTCG TCCCGCTAGA CGATCCGCGA TGGGTATGGG AAAAGACAGT GCTGGTGCTC ATCACGGCCG AAGAGTTGGT GGACAAGGTT GCAGATGGCG GGGATACGCT CGGGCAATGG GCGTCGGACG TGCGGTTGTT ATTGGGTTTG GCGACGGGCG ACCAGGTGGT GTTGATGATC AAGGGTCTGC AAAAGTATTA TTCGAAATCG CGGTCGTTGG CCAATAAGGA TTATATAAAC GCCGCCCGCG CGGGTCTCGA GGGCGGGTCG GCGGCGACGG CGACGCCGAT AACCTTTCGA CGCCCGACAA GGGAACAAAT CGAAGCCGAG ATGGTGAGAC TCCAAGTGGC TGAACATTTC TTCCTCGTGC ATGTCGAAAA GACGGAAGAC GTCGAAGACT GGGTGTACAA CATTGCGGCC GATATCGCGC TGAGACCGTA CAAACTGATC GCGAAATCGC ACCTCAATTT CGCCCCGGCC GAAGGTTCCA GAAAAGCGTT ACAGCCGACG GCGGTGCTCG AGCTGATGTT GCAGGAAGTA CAGGGGATCA CACCCTCCGC CGCGGCCGGG ATCACGGAAA AGTATCCGAC GTTTAGGCGG TTGATGGAGG CGTTTGAGAT GGAAGAGCAG AGAGGGGGGA TCGAGAGGGC GGAGATGATG TTGCAGTATT GTGAAGTGAG GAATTTGAAG AGCGGCCATG CGAGTGGCAG GAATTTGAAC AAGGTGGGGG TTTTAAGATT TTGTGTTTTC TTATGACTCA CTTTATCAAC TAGGCACTGT CGAAACGGGT TTACAATGCG TTCCGTGGAA CGGACAGTCT CTCTCTTGCC TGA
|
Protein sequence | MQAEVVVISD DESDQEIHLV ACKPILSHSL PALAPASAAI VIDSDSEDGI DSDSEDGIET DDDDDDDGEN QDILGLLSQM ADHSGLRAPT RTQSTSNGLT REEMAAIKAS EKEAKAAQKA KEKEARQFER DTAKLRTSKQ DALREIHLYL SADMCLPSSP IAGALPEIRH RIQDCQSALC FLPEPDSPIP GAIRFKRHLQ ARWDPGSKRF VPLDDPRWVW EKTVLVLITA EELVDKVADG GDTLGQWASD VRLLLGLATG DQVVLMIKGL QKYYSKSRSL ANKDYINAAR AGLEGGSAAT ATPITFRRPT REQIEAEMVR LQVAEHFFLV HVEKTEDVED WVYNIAADIA LRPYKLIAKS HLNFAPAEGS RKALQPTAVL ELMLQEVQGI TPSAAAGITE KYPTFRRLME AFEMEEQRGG IERAEMMLQY CEVRNLKSGH ASGRNLNKAL SKRVYNAFRG TDSLSLA
|
| |