Gene CNK00960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00960 
Symbol 
ID3254559 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp299770 
End bp302700 
Gene Length2931 bp 
Protein Length881 aa 
Translation table 
GC content59% 
IMG OID638253586 
Productconserved hypothetical protein 
Protein accessionXP_567784 
Protein GI58260748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCATGCCAGA CGCACTCCCA GACGACGCCT GGCTCACCGC CTTCCTCCCC ACCCCCCCCC 
GCCCCCTCCT CGCCGCCCTC CAGAAACGGC TCCACGCATC CACAGCCCAC CTCGCCGCCC
TCGCAGACAT CTACAAGCAG CGCGCAGCCA TCGAGGCGGC CTACGCAGAC GGCCTCCACA
AGCTCGCACG CACAGCAGAG CAGGGCGGCC TCACGGGCAA GGCCGGCAAT GACTGGCCAA
GGGGCAGCGC CGAGGCCCGC CTGTGGGACA GCGTCGTCTC CGAGCTCGCA GAGGTGCGTC
TCTCCGCCCG TCCGTGTGCG CCGTGCGACT GACCACTGCT GCAGACATCC GCCTCCCACT
CGACCCTATC CGCCATGCTG AGGACAGACT TTGAGCAGCC GATCCGCGAG ATCCCCAACA
AGGTCGTCGC ATGGCGCCGC ATCGGCGACC AGGACGCCAA CCTCGACAAG ACGCTCAGAG
ACTATGAAAA GGTCTCCGCC AAGCTCGAAA AGGCGTCGTC CAAGTCCAAG TCGAGCAAGG
TCGACGCCCT CCAGTCCGAC ATCAACAACA TCACCCACGC GCTCTCCTCG CTCTCGCCCA
TGGTGTACAC GACGTACCAG CGACTGGACG AAGAGCGGCT CCGTGCGCTC AAGGAGATCA
TCGTCAGGTG GGCCACCGTC AAGGGCGACA TGGCTTCCAG AGACGGACAG AGGGCGGAAG
CCATCGTTTC CCACCTCCTC CAGTGGGAGA CGAGCGACGA AGTCATGGAC GTCGGGCGAA
AGCTGGGTGC GATCGGCGGT GCTCGCGTCC CAGAGCGATC CGCCTCGGTC GCTACTTCCG
CCACCACTCG TGCGTTTCTA ACCTACTTGT GTTGACGAAT CACTAACAAC AAGCGGCCCG
CGGTAGCCCA ATCGAATCGC CGACTTTCTG CCGTTACATC TACCACCGCA ACCCACGGCG
ACTTTTCGCC CCGTCCTCCC GCTGCCCGCG CCAACGGTTC TTCGACCAAT GTCAGTCAGG
GTACGCCCGG CTCTTCCTTC ACCGGCGGTT TCAAATCCAT GCTTGCACGG TCAAAGACTG
TGGGTGGAGG CAGGAACAGG GGCGAGAGTG ATGCTACTTC TACACGAAGC GGTACCAGAG
GCGACAATTT TGAAGCCATC GGAGAGGAAG CTCCCCAGCT GAGAGAATCT TCAACTGTAA
ATTCATCTTG CCTATCTACC GCCGAACATT TACTGATTTA TTTATTTATT TATTTTTTGG
GTAAAAAGGC ACCTCCAGTT GACGAAGAGG GATTCTCCGT CGCTCCTTCC GACCGTCACC
GAAACCCTTG GGAAGACCCC AACGAGCTTA TCCCCACGCC GGCTGGTCAG ACTGTTCCAT
CTCAAGCCCA AGCTCCGGTC GTCCCCACCA AAGAGGCTCC CGCTTCCGCA CCTGCATTCA
GCCAACCATT CGACTCTTCT CCCAACGCTT CCGACGAAAA CCTCTCCACT CCCACATCTT
TGCAGCAGCA GCCTTTCAAA AACCTCTCCC TCGCACCTCT GCCTATCCAG GAGAGCGAAG
AAGAACGTCG AGCAGCTTTG GAAAAGATGC AGAAAACGCT GCAGCTTCCG CCTTCTCAGC
CTTCTAGACG GTCTACGATT GCGCGAGGGA GGAGGGATGT GAGGAACACG ATGTTTGCAG
GGTCGACGGA TGAAGCGACC GCAGCTTCCA ATGCGGTCTT TGGTGCCGGT GCCGTCGCTG
CAGGTGGATT CGCAAACGGG GCGTCTAAAT CGGCTGAACC AGAGGAGAAA CTCGTCGATT
CACCTACCTC TACCGTCCAC ACCGGTGTAT CCCTCCCTCA CGACATGCCG TCTCCATCAC
CCATCGCCGC CCGTCGAACT TCCCTTTCAT CCGTCACTTC CAACAATCCC TTTGATTCGC
CCACCATCGG GCTCGGCGGT ACGATGACCC CGCCGATCAA CCTCCACACC ACAACGCCTC
TCTCCGCCGC CGCCGCCGCG GACCAACCCG GTTTGCGCGC ACACGTCAAC GAATCGATCA
ATGTCATCTT CCGCAACAAG CAGGTCCAGC GGATCCACAT TACAGGCGAG ATCCACCTCA
GTCTTCGAGC AAAGGATGCT TCGTCGTCGT CGCCTTCCGC CCTTCCCGGT GGACCGATCC
ATATCCGTCT CGCCGCGTTT GAGCACCTCG AGAAAATCGC GCCCAACCCG GCGTACCTCG
CCCAAGTGCC CGATAAGCCG GGAGAGTATT TCCTAAACTC GGACGTCCTC GCTGCTGCCA
CCACCGCCAG AGGGTCCGCC GCGGGCCCCC TGCTGTTCAA GTACGTCGTC CATGTCCAGC
CGGGCAAAGA ACTGGCTACG GCCCCGTTGA TCCTTGATCC GGTGTTCCAA TGCAAGTCGG
GCGAGACGAG GATGATTTTA CATTACAGTG CGAACCCGTC GTCTCCCCTC GCCACCACGG
GCACACAGCT GGGTAGCGCC ACCGTTGTAG CCGCGTTTAC GCCCGGTGGA CCGAGCGTGA
GCAACGTCCA GGCGAAACCG GCAGGAGGCG TGTGGTCCCC CTCGACGAGG AGGATGACGT
GGAAAATGGA TTCGTTGTTG GGCACCACCG GAGGCAAGGT GATTGCCAAA TTCACAAGTG
AACCGGGACA AGAAGCCTTG GTACCGCAGG TCGTACAAGT GTCGTGGGCG GCGGAAGGGT
CGTTGATCAG CGGTCTGGGG CTCGACGTGG TGGATGGAGA GTTGGAAGGG AATCAGTGGG
TGTTTGAGGA GATTCGGAAA AGTACGACGA CGGGCAAGTA TTTGGCCGAA CCGGTTGTTA
CTCCATAAGT TTTATATATA TATTACACCC TCGAAAAGTA GTAAAAAAAA AAACACAATT
GGTCATAATT TCTTTCACTT TTTCCTCTTG CAATGCAGAT GGTCTTTGTT A
 
Protein sequence
MPDALPDDAW LTAFLPTPPR PLLAALQKRL HASTAHLAAL ADIYKQRAAI EAAYADGLHK 
LARTAEQGGL TGKAGNDWPR GSAEARLWDS VVSELAETSA SHSTLSAMLR TDFEQPIREI
PNKVVAWRRI GDQDANLDKT LRDYEKVSAK LEKASSKSKS SKVDALQSDI NNITHALSSL
SPMVYTTYQR LDEERLRALK EIIVRWATVK GDMASRDGQR AEAIVSHLLQ WETSDEVMDV
GRKLGAIGGA RVPERSASVA TSATTPQSNR RLSAVTSTTA THGDFSPRPP AARANGSSTN
VSQGTPGSSF TGGFKSMLAR SKTVGGGRNR GESDATSTRS GTRGDNFEAI GEEAPQLRES
STAPPVDEEG FSVAPSDRHR NPWEDPNELI PTPAGQTVPS QAQAPVVPTK EAPASAPAFS
QPFDSSPNAS DENLSTPTSL QQQPFKNLSL APLPIQESEE ERRAALEKMQ KTLQLPPSQP
SRRSTIARGR RDVRNTMFAG STDEATAASN AVFGAGAVAA GGFANGASKS AEPEEKLVDS
PTSTVHTGVS LPHDMPSPSP IAARRTSLSS VTSNNPFDSP TIGLGGTMTP PINLHTTTPL
SAAAAADQPG LRAHVNESIN VIFRNKQVQR IHITGEIHLS LRAKDASSSS PSALPGGPIH
IRLAAFEHLE KIAPNPAYLA QVPDKPGEYF LNSDVLAAAT TARGSAAGPL LFKYVVHVQP
GKELATAPLI LDPVFQCKSG ETRMILHYSA NPSSPLATTG TQLGSATVVA AFTPGGPSVS
NVQAKPAGGV WSPSTRRMTW KMDSLLGTTG GKVIAKFTSE PGQEALVPQV VQVSWAAEGS
LISGLGLDVV DGELEGNQWV FEEIRKSTTT GKYLAEPVVT P