Gene CNK00890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00890 
Symbol 
ID3254484 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp278719 
End bp281362 
Gene Length2644 bp 
Protein Length662 aa 
Translation table 
GC content50% 
IMG OID638253579 
Productearly growth response protein 1 (egr-1), putative 
Protein accessionXP_567652 
Protein GI58260484 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCGGGCCGA TCCCATGCTC CGCCGCGCTG AGGATCCGAC TCCGTTTTTT GGGTGGATCT 
GCGTTCCGGA GATATCTTTG TGACTTGCGC ACACCAGGAG GACGCTTTCG TGTTCTGTGA
GGATGAAGAC AACACCCAGG TCATATGCGC ATGGACAGCC AAGAGTTAAT TAACGGACCT
TCCAGCGGGA CAACCACACG GGTCCATTTC ATCGGCGCAG CTCTTCGGGC CAAAATTAGG
TTGCTTATCA GGTGACTCTG TCTTATCAGC TGACCCGCCA TGGACGCATT TGGACTGGAG
TGAGCTCCTC CCAGCGCTTG CACCAATCAG CACCAGCAAT TGAAGATCTG ATATGTATCC
CAATCAACAC GACGGCACCC CCGCTAACCA TAATCTCACT CGGCTACCAT TCGCATCAGC
TCATTCCATC CTCAACTGCC CTCTTTTCTC TCTGAGTAAC CTTCCGACGC GATGCTTTCC
GACCAAGGGA AACTTCAGCC CTTCAAGTGT GCAGTATGTT TGAGGCGCTT CACCAGGATG
GTATGTCCTC ATTGTGCCCA CCAATCAACC TCTCTTTATT ATGTCACTCA CACGCCGTTG
AAGGAAAATC TGAAGCGCCA TTCAAAACTA CACGACGATA CAAGCGAACG ACCAACTTTT
CCCTGCGGCC GGTGTACTGC TACATTTTCT CGAGCAGACC TTAGAAGACG ACATCTAGCA
AGTAAACATG GAGAGGAGAA GAGTACGAGT CGTAGTCCGA GGGAACTACC ATCTGTCTCA
AGCGGTGTAA ACGAGAGTCA TGAAAGGCGA GAGAGCGTTT CTGTTACGAA CTTCTCACCC
ATCATCACTG CTCAGCCCAT TTCTATAACA TCTCCTCGGC CACTACCTTC TGCTCTTGAA
GCAGCACTCA CATTTGACTT TGGCGTCAAT GAGTTCTCAT CAGATGCCAC ATGGAACTCC
ACACAGGAGG TCGATAATTC TCCTTCTCGA CATACCTCGC AGTCCCAGAC GTCGGCCTCT
TCGATTCCCA ATTACCATGC CCATTCTTCC ATTGGGAGTA TCAGCATGAC TTCTGTTGAT
CTTCAAGCAC GCTTATCTCA GTCTCCTTTG TCTGCCATTC CCCCTTCTGT TGAAGAAGCC
ATTCAAAATC CTGCATTCAT CTTCGCATCA CTTGAATCCT TCTTCTCGCA TGCTGCCCAT
ATATTCCCTT TCATCCATCG AGCTACATTT GACGCCCGAT CATGTCACCC AAGCCTATTA
TTTGGGATGA TGTGTATTGG GCTACATATG AAAGGAGAAG ACAGTGGAGA CGTTGACCAA
CAGAGGGCAA TTTATTGCTA TAAGGCGGGT CTGAGGGCTT TGGATGGAGT GATGGAGATT
ACACAAGAAA AGTCCACGGA CACGCTAACG ACCATTCAAG CACATCTGCT TTTAGAGATG
TACGCGATAA TGGCACTGTG TGGGAGCCAT ACTATGCAGG GGCTACGATT ACACTCGCAA
TGCGTTGAGG TAAGCCTCTC TTGTGCACAA TGCTCCATTC CTCCTAACCT CCGTTTAGCT
CTCTCGGAAA GCAGGTCTGA TGGAATCATA TCCTACCAAA CCGTCCGTCA CCCAAGACCT
TGACTCTCTC TGGCGCCAGT TCGTCCGTGC GGAATCCCAT AAACGTACTC TGTACTCCCT
TTACGGATTC GATTCCGCTT GGTACCATTT CCTCTCTCGA CCACGCTGCC TTTCCCATCT
CGAAATTAAA CATGAGCTTC CATGCGGCAA CGACCTCTGG AACGCTTGTA CACCTACTGA
ATGGGCTCAC CGCTCCCTCA TTGCATCTTC CCTTTGTTCT CGCGATGACA GCTCGTCAAC
AAGGATGCGA TTCCTTGATA TGGTTCGTGC TGCCTTTGTC AACCAGGTGG AAGACCCTCT
ACCTCTCCCA CTTGACTCCA CAGGGGCGTC ACTCATGACT CACTTTGTCC TGGCTTCTGT
CAGGGAAATG ACAGGATGGA CGACCATGAC AGGCCGCTCC TGTTTTGAGC GCTTTGAAGC
ACTTCTCGCG TCAATGGTAA GGCTGGAGCC GCTAGTGACC GTACAAAATG CCAAGTTGGA
GACGCCTGCG AGTGCAGCCG CGGAAGCGAC TTGGAGGATG AGCATGATTG AGTTATTGTT
ATGGTCTCAA AGCCATACAG GGGGATTGGT TGAAGATTCC ATTGATGCAG CTCTAGCGGC
AATGTACGTT CTTTGCTAGA AGATCTATGT TGTCTTTGCT GATCTATCGT GTCTAGAACG
ACATTGGGGG CCAATAACCC TATCGAACTC ACTGCACAGA TCATCCAATC AGTCGAACAA
CACATCACCT GGTTCCTCCT CTACCTCCAA CGCACATCCT CTCCCACCTC TCCCTCACTT
CAGTCGGAAT CGCCGCTACT TACATTTTAC CTCTTCAAGG CGACAATCAT CGCTTGGCAG
ATCGTAAAAA GTGGAGGATC GAGTCCGTTG GAAGTCGTGG GAGTAGAGGA TGAAGAAGGG
CTATTGAATT GGATGAAGAA GATGTTTAGG ATGCGCAAGA AGTGGGGGGT AGGACGTTCT
GCAATGAGAT GTCTGGGTGA TCTGCATGTG CAGAATGTGT TGTAATGTTT AAATAAAATT
TTTT
 
Protein sequence
MLSDQGKLQP FKCAVCLRRF TRMENLKRHS KLHDDTSERP TFPCGRCTAT FSRADLRRRH 
LASKHGEEKS TSRSPRELPS VSSGVNESHE RRESVSVTNF SPIITAQPIS ITSPRPLPSA
LEAALTFDFG VNEFSSDATW NSTQEVDNSP SRHTSQSQTS ASSIPNYHAH SSIGSISMTS
VDLQARLSQS PLSAIPPSVE EAIQNPAFIF ASLESFFSHA AHIFPFIHRA TFDARSCHPS
LLFGMMCIGL HMKGEDSGDV DQQRAIYCYK AGLRALDGVM EITQEKSTDT LTTIQAHLLL
EMYAIMALCG SHTMQGLRLH SQCVELSRKA GLMESYPTKP SVTQDLDSLW RQFVRAESHK
RTLYSLYGFD SAWYHFLSRP RCLSHLEIKH ELPCGNDLWN ACTPTEWAHR SLIASSLCSR
DDSSSTRMRF LDMVRAAFVN QVEDPLPLPL DSTGASLMTH FVLASVREMT GWTTMTGRSC
FERFEALLAS MVRLEPLVTV QNAKLETPAS AAAEATWRMS MIELLLWSQS HTGGLVEDSI
DAALAAITTL GANNPIELTA QIIQSVEQHI TWFLLYLQRT SSPTSPSLQS ESPLLTFYLF
KATIIAWQIV KSGGSSPLEV VGVEDEEGLL NWMKKMFRMR KKWGVGRSAM RCLGDLHVQN
VL