Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNK00890 |
Symbol | |
ID | 3254484 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006680 |
Strand | - |
Start bp | 278719 |
End bp | 281362 |
Gene Length | 2644 bp |
Protein Length | 662 aa |
Translation table | |
GC content | 50% |
IMG OID | 638253579 |
Product | early growth response protein 1 (egr-1), putative |
Protein accession | XP_567652 |
Protein GI | 58260484 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCGGGCCGA TCCCATGCTC CGCCGCGCTG AGGATCCGAC TCCGTTTTTT GGGTGGATCT GCGTTCCGGA GATATCTTTG TGACTTGCGC ACACCAGGAG GACGCTTTCG TGTTCTGTGA GGATGAAGAC AACACCCAGG TCATATGCGC ATGGACAGCC AAGAGTTAAT TAACGGACCT TCCAGCGGGA CAACCACACG GGTCCATTTC ATCGGCGCAG CTCTTCGGGC CAAAATTAGG TTGCTTATCA GGTGACTCTG TCTTATCAGC TGACCCGCCA TGGACGCATT TGGACTGGAG TGAGCTCCTC CCAGCGCTTG CACCAATCAG CACCAGCAAT TGAAGATCTG ATATGTATCC CAATCAACAC GACGGCACCC CCGCTAACCA TAATCTCACT CGGCTACCAT TCGCATCAGC TCATTCCATC CTCAACTGCC CTCTTTTCTC TCTGAGTAAC CTTCCGACGC GATGCTTTCC GACCAAGGGA AACTTCAGCC CTTCAAGTGT GCAGTATGTT TGAGGCGCTT CACCAGGATG GTATGTCCTC ATTGTGCCCA CCAATCAACC TCTCTTTATT ATGTCACTCA CACGCCGTTG AAGGAAAATC TGAAGCGCCA TTCAAAACTA CACGACGATA CAAGCGAACG ACCAACTTTT CCCTGCGGCC GGTGTACTGC TACATTTTCT CGAGCAGACC TTAGAAGACG ACATCTAGCA AGTAAACATG GAGAGGAGAA GAGTACGAGT CGTAGTCCGA GGGAACTACC ATCTGTCTCA AGCGGTGTAA ACGAGAGTCA TGAAAGGCGA GAGAGCGTTT CTGTTACGAA CTTCTCACCC ATCATCACTG CTCAGCCCAT TTCTATAACA TCTCCTCGGC CACTACCTTC TGCTCTTGAA GCAGCACTCA CATTTGACTT TGGCGTCAAT GAGTTCTCAT CAGATGCCAC ATGGAACTCC ACACAGGAGG TCGATAATTC TCCTTCTCGA CATACCTCGC AGTCCCAGAC GTCGGCCTCT TCGATTCCCA ATTACCATGC CCATTCTTCC ATTGGGAGTA TCAGCATGAC TTCTGTTGAT CTTCAAGCAC GCTTATCTCA GTCTCCTTTG TCTGCCATTC CCCCTTCTGT TGAAGAAGCC ATTCAAAATC CTGCATTCAT CTTCGCATCA CTTGAATCCT TCTTCTCGCA TGCTGCCCAT ATATTCCCTT TCATCCATCG AGCTACATTT GACGCCCGAT CATGTCACCC AAGCCTATTA TTTGGGATGA TGTGTATTGG GCTACATATG AAAGGAGAAG ACAGTGGAGA CGTTGACCAA CAGAGGGCAA TTTATTGCTA TAAGGCGGGT CTGAGGGCTT TGGATGGAGT GATGGAGATT ACACAAGAAA AGTCCACGGA CACGCTAACG ACCATTCAAG CACATCTGCT TTTAGAGATG TACGCGATAA TGGCACTGTG TGGGAGCCAT ACTATGCAGG GGCTACGATT ACACTCGCAA TGCGTTGAGG TAAGCCTCTC TTGTGCACAA TGCTCCATTC CTCCTAACCT CCGTTTAGCT CTCTCGGAAA GCAGGTCTGA TGGAATCATA TCCTACCAAA CCGTCCGTCA CCCAAGACCT TGACTCTCTC TGGCGCCAGT TCGTCCGTGC GGAATCCCAT AAACGTACTC TGTACTCCCT TTACGGATTC GATTCCGCTT GGTACCATTT CCTCTCTCGA CCACGCTGCC TTTCCCATCT CGAAATTAAA CATGAGCTTC CATGCGGCAA CGACCTCTGG AACGCTTGTA CACCTACTGA ATGGGCTCAC CGCTCCCTCA TTGCATCTTC CCTTTGTTCT CGCGATGACA GCTCGTCAAC AAGGATGCGA TTCCTTGATA TGGTTCGTGC TGCCTTTGTC AACCAGGTGG AAGACCCTCT ACCTCTCCCA CTTGACTCCA CAGGGGCGTC ACTCATGACT CACTTTGTCC TGGCTTCTGT CAGGGAAATG ACAGGATGGA CGACCATGAC AGGCCGCTCC TGTTTTGAGC GCTTTGAAGC ACTTCTCGCG TCAATGGTAA GGCTGGAGCC GCTAGTGACC GTACAAAATG CCAAGTTGGA GACGCCTGCG AGTGCAGCCG CGGAAGCGAC TTGGAGGATG AGCATGATTG AGTTATTGTT ATGGTCTCAA AGCCATACAG GGGGATTGGT TGAAGATTCC ATTGATGCAG CTCTAGCGGC AATGTACGTT CTTTGCTAGA AGATCTATGT TGTCTTTGCT GATCTATCGT GTCTAGAACG ACATTGGGGG CCAATAACCC TATCGAACTC ACTGCACAGA TCATCCAATC AGTCGAACAA CACATCACCT GGTTCCTCCT CTACCTCCAA CGCACATCCT CTCCCACCTC TCCCTCACTT CAGTCGGAAT CGCCGCTACT TACATTTTAC CTCTTCAAGG CGACAATCAT CGCTTGGCAG ATCGTAAAAA GTGGAGGATC GAGTCCGTTG GAAGTCGTGG GAGTAGAGGA TGAAGAAGGG CTATTGAATT GGATGAAGAA GATGTTTAGG ATGCGCAAGA AGTGGGGGGT AGGACGTTCT GCAATGAGAT GTCTGGGTGA TCTGCATGTG CAGAATGTGT TGTAATGTTT AAATAAAATT TTTT
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Protein sequence | MLSDQGKLQP FKCAVCLRRF TRMENLKRHS KLHDDTSERP TFPCGRCTAT FSRADLRRRH LASKHGEEKS TSRSPRELPS VSSGVNESHE RRESVSVTNF SPIITAQPIS ITSPRPLPSA LEAALTFDFG VNEFSSDATW NSTQEVDNSP SRHTSQSQTS ASSIPNYHAH SSIGSISMTS VDLQARLSQS PLSAIPPSVE EAIQNPAFIF ASLESFFSHA AHIFPFIHRA TFDARSCHPS LLFGMMCIGL HMKGEDSGDV DQQRAIYCYK AGLRALDGVM EITQEKSTDT LTTIQAHLLL EMYAIMALCG SHTMQGLRLH SQCVELSRKA GLMESYPTKP SVTQDLDSLW RQFVRAESHK RTLYSLYGFD SAWYHFLSRP RCLSHLEIKH ELPCGNDLWN ACTPTEWAHR SLIASSLCSR DDSSSTRMRF LDMVRAAFVN QVEDPLPLPL DSTGASLMTH FVLASVREMT GWTTMTGRSC FERFEALLAS MVRLEPLVTV QNAKLETPAS AAAEATWRMS MIELLLWSQS HTGGLVEDSI DAALAAITTL GANNPIELTA QIIQSVEQHI TWFLLYLQRT SSPTSPSLQS ESPLLTFYLF KATIIAWQIV KSGGSSPLEV VGVEDEEGLL NWMKKMFRMR KKWGVGRSAM RCLGDLHVQN VL
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